RNA–Protein interactions for RNA: ENST00000620040.4

DMD-230, Transcript of dystrophin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DMD, Length 13,746 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-230ENST00000620040 TIMELESSQ9UNS1 1208 aa5.52□□□□□ -1.53
DMD-230ENST00000620040 PTMSP20962 102 aa5.52□□□□□ -1.53
DMD-230ENST00000620040 MIER1Q8N108 512 aa5.51□□□□□ -1.53
DMD-230ENST00000620040 TONSLQ96HA7 1378 aa5.51□□□□□ -1.53
DMD-230ENST00000620040 ARID4BQ4LE39 1312 aaPredicted RBP5.51□□□□□ -1.53
DMD-230ENST00000620040 MSNP26038 577 aaKnown RBP5.51□□□□□ -1.53
DMD-230ENST00000620040 ZRSR1Q15695 479 aaKnown RBP5.51□□□□□ -1.53
DMD-230ENST00000620040 RSPH6AQ9H0K4 717 aa5.5□□□□□ -1.53
DMD-230ENST00000620040 MYH16Q9H6N6 1097 aa5.5□□□□□ -1.53
DMD-230ENST00000620040 DEKP35659 375 aaKnown RBP5.5□□□□□ -1.53
DMD-230ENST00000620040 TSHZ2Q9NRE2 1034 aa5.49□□□□□ -1.53
DMD-230ENST00000620040 TNNT3P45378 269 aaPredicted RBP5.49□□□□□ -1.53
DMD-230ENST00000620040 WRNQ14191 1432 aaPredicted RBP eCLIP5.48□□□□□ -1.53
DMD-230ENST00000620040 FANCIQ9NVI1 1328 aa5.48□□□□□ -1.53
DMD-230ENST00000620040 CASC1Q6TDU7 716 aa5.48□□□□□ -1.53
DMD-230ENST00000620040 PNNQ9H307 717 aaKnown RBP5.46□□□□□ -1.53
DMD-230ENST00000620040 USP35Q9P2H5 1018 aa5.46□□□□□ -1.53
DMD-230ENST00000620040 RBM19Q9Y4C8 960 aaKnown RBP5.46□□□□□ -1.54
DMD-230ENST00000620040 CALRP27797 417 aaKnown RBP5.45□□□□□ -1.54
DMD-230ENST00000620040 TMC1Q8TDI8 760 aa5.45□□□□□ -1.54
DMD-230ENST00000620040 PPP4R2Q9NY27 417 aa5.45□□□□□ -1.54
DMD-230ENST00000620040 FAM9BQ8IZU0 186 aa5.45□□□□□ -1.54
DMD-230ENST00000620040 HSP90AA2PQ14568 343 aaPredicted RBP5.44□□□□□ -1.54
DMD-230ENST00000620040 SMARCA2P51531 1590 aa5.44□□□□□ -1.54
DMD-230ENST00000620040 SETQ01105 290 aaPredicted RBP5.44□□□□□ -1.54
DMD-230ENST00000620040 WDR43Q15061 677 aaKnown RBP eCLIP5.44□□□□□ -1.54
DMD-230ENST00000620040 CFAP44Q96MT7 982 aa5.43□□□□□ -1.54
DMD-230ENST00000620040 MRS2Q9HD23 443 aa5.43□□□□□ -1.54
DMD-230ENST00000620040 CEP162Q5TB80 1403 aa5.43□□□□□ -1.54
DMD-230ENST00000620040 KIAA2012Q0VF49 1180 aa5.43□□□□□ -1.54
DMD-230ENST00000620040 A0A0U1RQG5 324 aaPredicted RBP5.42□□□□□ -1.54
DMD-230ENST00000620040 DDX10Q13206 875 aaKnown RBP5.41□□□□□ -1.54
DMD-230ENST00000620040 CHMP4BQ9H444 224 aaKnown RBP5.41□□□□□ -1.54
DMD-230ENST00000620040 LAS1LQ9Y4W2 734 aaKnown RBP5.41□□□□□ -1.54
DMD-230ENST00000620040 GOLGA3Q08378 1498 aa5.41□□□□□ -1.54
DMD-230ENST00000620040 GOLGA6L1Q8N7Z2 621 aa5.41□□□□□ -1.54
DMD-230ENST00000620040 ARID3AQ99856 593 aa5.4□□□□□ -1.54
DMD-230ENST00000620040 IRX6P78412 446 aaPredicted RBP5.4□□□□□ -1.54
DMD-230ENST00000620040 GOLGA6L3A6NEY3 463 aa5.4□□□□□ -1.55
DMD-230ENST00000620040 CCER2I3L3R5 266 aa5.39□□□□□ -1.55
DMD-230ENST00000620040 HSCBQ8IWL3 235 aa5.39□□□□□ -1.55
DMD-230ENST00000620040 SYAP1Q96A49 352 aaPredicted RBP5.39□□□□□ -1.55
DMD-230ENST00000620040 CEP164Q9UPV0 1460 aa5.39□□□□□ -1.55
DMD-230ENST00000620040 HSP90AB1P08238 724 aaKnown RBP5.39□□□□□ -1.55
DMD-230ENST00000620040 GBP4Q96PP9 640 aa5.39□□□□□ -1.55
DMD-230ENST00000620040 ABCC8Q09428 1581 aa5.39□□□□□ -1.55
DMD-230ENST00000620040 TNIKQ9UKE5 1360 aa5.38□□□□□ -1.55
DMD-230ENST00000620040 UBE2Q2Q8WVN8 375 aa5.38□□□□□ -1.55
DMD-230ENST00000620040 FHAD1B1AJZ9 1412 aa5.38□□□□□ -1.55
DMD-230ENST00000620040 MS4A1P11836 297 aa5.38□□□□□ -1.55
DMD-230ENST00000620040 SCRIBQ14160 1630 aa5.38□□□□□ -1.55
DMD-230ENST00000620040 VSIG10Q8N0Z9 540 aa5.37□□□□□ -1.55
DMD-230ENST00000620040 MTERF4Q7Z6M4 381 aaKnown RBP5.37□□□□□ -1.55
DMD-230ENST00000620040 DRC7Q8IY82 874 aa5.36□□□□□ -1.55
DMD-230ENST00000620040 SENP3-EIF4A1A0A087X0R7 540 aa5.35□□□□□ -1.55
DMD-230ENST00000620040 GOLGA6L4A6NEF3 574 aa5.35□□□□□ -1.55
DMD-230ENST00000620040 EIF4G2P78344 907 aaKnown RBP eCLIP5.35□□□□□ -1.552e-7■■■□□ 16.3
DMD-230ENST00000620040 PLCB2Q00722 1185 aa5.35□□□□□ -1.55
DMD-230ENST00000620040 PKNOX2Q96KN3 472 aa5.35□□□□□ -1.55
DMD-230ENST00000620040 NOM1Q5C9Z4 860 aaKnown RBP5.35□□□□□ -1.55
DMD-230ENST00000620040 CLIP1P30622 1438 aa5.35□□□□□ -1.55
DMD-230ENST00000620040 MAP7D2Q96T17 732 aa5.35□□□□□ -1.55
DMD-230ENST00000620040 PHF14O94880 888 aa5.34□□□□□ -1.55
DMD-230ENST00000620040 FTSJ3Q8IY81 847 aaKnown RBP5.34□□□□□ -1.55
DMD-230ENST00000620040 RSF1Q96T23 1441 aaPredicted RBP5.34□□□□□ -1.55
DMD-230ENST00000620040 GPS2Q13227 327 aa5.34□□□□□ -1.55
DMD-230ENST00000620040 APPP05067 770 aa5.34□□□□□ -1.56
DMD-230ENST00000620040 ANO8Q9HCE9 1232 aaPredicted RBP5.34□□□□□ -1.56
DMD-230ENST00000620040 HTATSF1O43719 755 aaKnown RBP5.34□□□□□ -1.56
DMD-230ENST00000620040 MCCP23508 829 aa5.33□□□□□ -1.56
DMD-230ENST00000620040 IPO9Q96P70 1041 aaKnown RBP5.33□□□□□ -1.56
DMD-230ENST00000620040 ZBTB7CA1YPR0 619 aa5.33□□□□□ -1.56
DMD-230ENST00000620040 TCERG1O14776 1098 aaKnown RBP5.33□□□□□ -1.56
DMD-230ENST00000620040 VPS8Q8N3P4 1428 aa5.33□□□□□ -1.56
DMD-230ENST00000620040 KIF21BO75037 1637 aa5.32□□□□□ -1.56
DMD-230ENST00000620040 TPM4P67936 248 aa5.32□□□□□ -1.56
DMD-230ENST00000620040 TEX35Q5T0J7 233 aa5.32□□□□□ -1.56
DMD-230ENST00000620040 DDX11L8A8MPP1 907 aa5.32□□□□□ -1.56
DMD-230ENST00000620040 CSPP1Q1MSJ5 1256 aa5.32□□□□□ -1.56
DMD-230ENST00000620040 PODXL2Q9NZ53 605 aa5.32□□□□□ -1.56
DMD-230ENST00000620040 NOC3LQ8WTT2 800 aaKnown RBP5.31□□□□□ -1.56
DMD-230ENST00000620040 TOP2AP11388 1531 aaKnown RBP5.31□□□□□ -1.56
DMD-230ENST00000620040 ZNF771Q7L3S4 317 aaPredicted RBP5.31□□□□□ -1.56
DMD-230ENST00000620040 CFAP53Q96M91 514 aa5.31□□□□□ -1.56
DMD-230ENST00000620040 SALL2Q9Y467 1007 aaPredicted RBP5.31□□□□□ -1.56
DMD-230ENST00000620040 CDCA8Q53HL2 280 aa5.31□□□□□ -1.56
DMD-230ENST00000620040 SKOR2Q2VWA4 1001 aaPredicted RBP5.3□□□□□ -1.56
DMD-230ENST00000620040 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.3□□□□□ -1.56
DMD-230ENST00000620040 CCDC66A2RUB6 948 aa5.3□□□□□ -1.56
DMD-230ENST00000620040 GSE1Q14687 1217 aa5.3□□□□□ -1.56
DMD-230ENST00000620040 TAF3Q5VWG9 929 aa5.3□□□□□ -1.56
DMD-230ENST00000620040 CWC15Q9P013 229 aaKnown RBP5.29□□□□□ -1.56
DMD-230ENST00000620040 RGS3P49796 1198 aa5.29□□□□□ -1.56
DMD-230ENST00000620040 STAC3Q96MF2 364 aa5.29□□□□□ -1.56
DMD-230ENST00000620040 CCDC34Q96HJ3 373 aa5.29□□□□□ -1.56
DMD-230ENST00000620040 KIF27Q86VH2 1401 aa5.28□□□□□ -1.56
DMD-230ENST00000620040 ERICH3Q5RHP9 1530 aa5.28□□□□□ -1.56
DMD-230ENST00000620040 PEG3Q9GZU2 1588 aa5.28□□□□□ -1.56
DMD-230ENST00000620040 CALD1Q05682 793 aaKnown RBP5.28□□□□□ -1.56
DMD-230ENST00000620040 CCDC70Q6NSX1 233 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms