RNA–Protein interactions for RNA: ENST00000619924.1

LINC01140-211, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

Gene LINC01140, Length 1,034 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-211ENST00000619924 KIAA0586Q9BVV6 1533 aa36.96■■■■□ 3.51
LINC01140-211ENST00000619924 DNAJC5Q9H3Z4 198 aa36.96■■■■□ 3.51
LINC01140-211ENST00000619924 GOLGA3Q08378 1498 aa36.92■■■■□ 3.5
LINC01140-211ENST00000619924 IQGAP2Q13576 1575 aa36.91■■■■□ 3.5
LINC01140-211ENST00000619924 ARHGEF11O15085 1522 aa36.76■■■■□ 3.48
LINC01140-211ENST00000619924 UGGT2Q9NYU1 1516 aa36.73■■■■□ 3.47
LINC01140-211ENST00000619924 RIMBP3CA6NJZ7 1639 aa36.73■■■■□ 3.47
LINC01140-211ENST00000619924 RIMBP3BA6NNM3 1639 aa36.73■■■■□ 3.47
LINC01140-211ENST00000619924 RIMBP3Q9UFD9 1639 aa36.73■■■■□ 3.47
LINC01140-211ENST00000619924 ERCC6L2Q5T890 1561 aa36.69■■■■□ 3.46
LINC01140-211ENST00000619924 JPH4Q96JJ6 628 aa36.66■■■■□ 3.46
LINC01140-211ENST00000619924 PRG4Q92954 1404 aaPredicted RBP36.63■■■■□ 3.45
LINC01140-211ENST00000619924 DISP1Q96F81 1524 aa36.59■■■■□ 3.45
LINC01140-211ENST00000619924 KIAA0556O60303 1618 aa36.58■■■■□ 3.45
LINC01140-211ENST00000619924 EHMT2Q96KQ7 1210 aa36.56■■■■□ 3.44
LINC01140-211ENST00000619924 SAMD9Q5K651 1589 aa36.56■■■■□ 3.44
LINC01140-211ENST00000619924 UBTFP17480 764 aaKnown RBP36.54■■■■□ 3.44
LINC01140-211ENST00000619924 ARAP1Q96P48 1450 aa36.51■■■■□ 3.44
LINC01140-211ENST00000619924 TNIKQ9UKE5 1360 aa36.49■■■■□ 3.43
LINC01140-211ENST00000619924 CARMIL2Q6F5E8 1435 aa36.49■■■■□ 3.43
LINC01140-211ENST00000619924 EFCAB5A4FU69 1503 aa36.46■■■■□ 3.43
LINC01140-211ENST00000619924 LOC105371045A0A1W2PR82 267 aa36.32■■■■□ 3.4
LINC01140-211ENST00000619924 ARHGAP35Q9NRY4 1499 aa36.31■■■■□ 3.4
LINC01140-211ENST00000619924 PTPRGP23470 1445 aa36.23■■■■□ 3.39
LINC01140-211ENST00000619924 FHOD3Q2V2M9 1422 aa36.23■■■■□ 3.39
LINC01140-211ENST00000619924 CEP162Q5TB80 1403 aa36.22■■■■□ 3.39
LINC01140-211ENST00000619924 CLIP1P30622 1438 aa36.21■■■■□ 3.39
LINC01140-211ENST00000619924 RANGAP1P46060 587 aaPredicted RBP36.21■■■■□ 3.39
LINC01140-211ENST00000619924 CYB5RLQ6IPT4 315 aa36.15■■■■□ 3.38
LINC01140-211ENST00000619924 ADCY10Q96PN6 1610 aa36.15■■■■□ 3.38
LINC01140-211ENST00000619924 ABCA8O94911 1581 aa36.13■■■■□ 3.37
LINC01140-211ENST00000619924 P3H3Q8IVL6 736 aa36.12■■■■□ 3.37
LINC01140-211ENST00000619924 ABCC2Q92887 1545 aa36.08■■■■□ 3.37
LINC01140-211ENST00000619924 UHRF1BP1LA0JNW5 1464 aa36.08■■■■□ 3.37
LINC01140-211ENST00000619924 PLB1Q6P1J6 1458 aa36.06■■■■□ 3.36
LINC01140-211ENST00000619924 UACAQ9BZF9 1416 aa36.06■■■■□ 3.36
LINC01140-211ENST00000619924 RAPGEF6Q8TEU7 1601 aa36.05■■■■□ 3.36
LINC01140-211ENST00000619924 TTBK1Q5TCY1 1321 aaPredicted RBP36.02■■■■□ 3.36
LINC01140-211ENST00000619924 FMN1Q68DA7 1419 aa36.01■■■■□ 3.36
LINC01140-211ENST00000619924 PCF11O94913 1555 aaKnown RBP35.92■■■■□ 3.34
LINC01140-211ENST00000619924 KDM5BQ9UGL1 1544 aa35.9■■■■□ 3.34
LINC01140-211ENST00000619924 HECW1Q76N89 1606 aa35.89■■■■□ 3.34
LINC01140-211ENST00000619924 NUP153P49790 1475 aaKnown RBP35.88■■■■□ 3.33
LINC01140-211ENST00000619924 ZCCHC11Q5TAX3 1644 aaKnown RBP35.88■■■■□ 3.33
LINC01140-211ENST00000619924 FYCO1Q9BQS8 1478 aa35.82■■■■□ 3.32
LINC01140-211ENST00000619924 LRRIQ1Q96JM4 1722 aa35.82■■■■□ 3.32
LINC01140-211ENST00000619924 CASKIN1Q8WXD9 1431 aa35.82■■■■□ 3.32
LINC01140-211ENST00000619924 MAPKBP1O60336 1514 aa35.81■■■■□ 3.32
LINC01140-211ENST00000619924 VPS8Q8N3P4 1428 aa35.76■■■■□ 3.32
LINC01140-211ENST00000619924 ATP10BO94823 1461 aa35.73■■■■□ 3.31
LINC01140-211ENST00000619924 EPRSP07814 1512 aaKnown RBP35.7■■■■□ 3.31
LINC01140-211ENST00000619924 CDK13Q14004 1512 aaKnown RBP35.67■■■■□ 3.3
LINC01140-211ENST00000619924 NPM1P06748 294 aaKnown RBP eCLIP35.65■■■■□ 3.3
LINC01140-211ENST00000619924 CCDC18Q5T9S5 1454 aa35.65■■■■□ 3.3
LINC01140-211ENST00000619924 ASXL2Q76L83 1435 aa35.62■■■■□ 3.29
LINC01140-211ENST00000619924 CFAP43Q8NDM7 1665 aa35.59■■■■□ 3.29
LINC01140-211ENST00000619924 WDR7Q9Y4E6 1490 aa35.58■■■■□ 3.29
LINC01140-211ENST00000619924 ARID3CA6NKF2 412 aa35.57■■■■□ 3.28
LINC01140-211ENST00000619924 DIP2BQ9P265 1576 aa35.55■■■■□ 3.28
LINC01140-211ENST00000619924 KIF13AQ9H1H9 1805 aa35.53■■■■□ 3.28
LINC01140-211ENST00000619924 ABCC10Q5T3U5 1492 aa35.49■■■■□ 3.27
LINC01140-211ENST00000619924 ATP1B4Q9UN42 357 aaPredicted RBP35.49■■■■□ 3.27
LINC01140-211ENST00000619924 TIAM1Q13009 1591 aa35.47■■■■□ 3.27
LINC01140-211ENST00000619924 MAGI3Q5TCQ9 1506 aa35.44■■■■□ 3.26
LINC01140-211ENST00000619924 GLI2P10070 1586 aa35.43■■■■□ 3.26
LINC01140-211ENST00000619924 MAP3K1Q13233 1512 aa35.43■■■■□ 3.26
LINC01140-211ENST00000619924 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.4■■■■□ 3.26
LINC01140-211ENST00000619924 HNRNPUL2Q1KMD3 747 aaKnown RBP35.4■■■■□ 3.26
LINC01140-211ENST00000619924 TROQ12816 1431 aaPredicted RBP35.38■■■■□ 3.25
LINC01140-211ENST00000619924 EHBP1L1Q8N3D4 1523 aa35.34■■■■□ 3.25
LINC01140-211ENST00000619924 KIF14Q15058 1648 aa35.34■■■■□ 3.25
LINC01140-211ENST00000619924 ABCA9Q8IUA7 1624 aa35.34■■■■□ 3.25
LINC01140-211ENST00000619924 MAP3K4Q9Y6R4 1608 aa35.34■■■■□ 3.25
LINC01140-211ENST00000619924 PLEKHD1A6NEE1 506 aa35.32■■■■□ 3.24
LINC01140-211ENST00000619924 CDK11AQ9UQ88 783 aaPredicted RBP35.32■■■■□ 3.24
LINC01140-211ENST00000619924 TTC37Q6PGP7 1564 aa35.27■■■■□ 3.24
LINC01140-211ENST00000619924 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.26■■■■□ 3.23
LINC01140-211ENST00000619924 LRRC9Q6ZRR7 1453 aa35.24■■■■□ 3.23
LINC01140-211ENST00000619924 PPRC1Q5VV67 1664 aaKnown RBP35.22■■■■□ 3.23
LINC01140-211ENST00000619924 FAM69CQ0P6D2 419 aa35.22■■■■□ 3.23
LINC01140-211ENST00000619924 MTUS2Q5JR59 1369 aa35.21■■■■□ 3.23
LINC01140-211ENST00000619924 KCNH8Q96L42 1107 aa35.19■■■■□ 3.22
LINC01140-211ENST00000619924 SUPT6HQ7KZ85 1726 aaKnown RBP35.18■■■■□ 3.22
LINC01140-211ENST00000619924 TRHP20396 242 aaPredicted RBP35.17■■■■□ 3.22
LINC01140-211ENST00000619924 TSPOAP1O95153 1857 aa35.16■■■■□ 3.22
LINC01140-211ENST00000619924 MYO5CQ9NQX4 1742 aa35.15■■■■□ 3.22
LINC01140-211ENST00000619924 CDC42BPAQ5VT25 1732 aa35.1■■■■□ 3.21
LINC01140-211ENST00000619924 CD109Q6YHK3 1445 aa35.09■■■■□ 3.21
LINC01140-211ENST00000619924 APLP2Q06481 763 aa35.09■■■■□ 3.21
LINC01140-211ENST00000619924 PREX2Q70Z35 1606 aa35.09■■■■□ 3.21
LINC01140-211ENST00000619924 KANK4Q5T7N3 995 aaPredicted RBP35.08■■■■□ 3.21
LINC01140-211ENST00000619924 ARAP3Q8WWN8 1544 aa35.07■■■■□ 3.21
LINC01140-211ENST00000619924 NCOA2Q15596 1464 aa35.05■■■■□ 3.2
LINC01140-211ENST00000619924 CDC42BPBQ9Y5S2 1711 aa35.03■■■■□ 3.2
LINC01140-211ENST00000619924 ITSN2Q9NZM3 1697 aa35.02■■■■□ 3.2
LINC01140-211ENST00000619924 TEX14Q8IWB6 1497 aa35.02■■■■□ 3.2
LINC01140-211ENST00000619924 CFAP74Q9C0B2 1584 aa35■■■■□ 3.19
LINC01140-211ENST00000619924 PLCH2O75038 1416 aa34.98■■■■□ 3.19
LINC01140-211ENST00000619924 GPATCH8Q9UKJ3 1502 aaKnown RBP34.96■■■■□ 3.19
LINC01140-211ENST00000619924 NEO1Q92859 1461 aa34.91■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms