RNA–Protein interactions for RNA: ENST00000618014.1

CCNA2-202, Transcript of cyclin A2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNA2, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA2-202ENST00000618014 PRKCSHP14314 528 aaPredicted RBP22.66■■□□□ 1.22
CCNA2-202ENST00000618014 CDK11AQ9UQ88 783 aaPredicted RBP22.65■■□□□ 1.22
CCNA2-202ENST00000618014 ANP32CO43423 234 aa22.64■■□□□ 1.21
CCNA2-202ENST00000618014 PRXQ9BXM0 1461 aa22.61■■□□□ 1.21
CCNA2-202ENST00000618014 TIMELESSQ9UNS1 1208 aa22.58■■□□□ 1.21
CCNA2-202ENST00000618014 TOP2BQ02880 1626 aa22.57■■□□□ 1.2
CCNA2-202ENST00000618014 SETD5Q9C0A6 1442 aa22.55■■□□□ 1.2
CCNA2-202ENST00000618014 DEKP35659 375 aaKnown RBP22.53■■□□□ 1.2
CCNA2-202ENST00000618014 SIN3AQ96ST3 1273 aa22.51■■□□□ 1.19
CCNA2-202ENST00000618014 ERICH6BQ5W0A0 696 aa22.5■■□□□ 1.19
CCNA2-202ENST00000618014 BIVM-ERCC5R4GMW8 1640 aa22.47■■□□□ 1.19
CCNA2-202ENST00000618014 NCAPD3P42695 1498 aa22.44■■□□□ 1.18
CCNA2-202ENST00000618014 HIRIP3Q9BW71 556 aaPredicted RBP22.43■■□□□ 1.18
CCNA2-202ENST00000618014 ARHGAP35Q9NRY4 1499 aa22.43■■□□□ 1.18
CCNA2-202ENST00000618014 MAP3K1Q13233 1512 aa22.4■■□□□ 1.18
CCNA2-202ENST00000618014 IRX6P78412 446 aaPredicted RBP22.4■■□□□ 1.18
CCNA2-202ENST00000618014 HMGXB3Q12766 1538 aa22.4■■□□□ 1.18
CCNA2-202ENST00000618014 PPP4R2Q9NY27 417 aa22.39■■□□□ 1.18
CCNA2-202ENST00000618014 HNRNPUQ00839 825 aaKnown RBP eCLIP22.38■■□□□ 1.17
CCNA2-202ENST00000618014 TIAM1Q13009 1591 aa22.37■■□□□ 1.17
CCNA2-202ENST00000618014 CC2D2AQ9P2K1 1620 aa22.32■■□□□ 1.16
CCNA2-202ENST00000618014 NOP58Q9Y2X3 529 aaKnown RBP22.3■■□□□ 1.16
CCNA2-202ENST00000618014 LRRC9Q6ZRR7 1453 aa22.28■■□□□ 1.16
CCNA2-202ENST00000618014 PHLDB1Q86UU1 1377 aa22.27■■□□□ 1.16
CCNA2-202ENST00000618014 KIF27Q86VH2 1401 aa22.27■■□□□ 1.16
CCNA2-202ENST00000618014 FAM50AQ14320 339 aaKnown RBP22.22■■□□□ 1.15
CCNA2-202ENST00000618014 TONSLQ96HA7 1378 aa22.22■■□□□ 1.15
CCNA2-202ENST00000618014 NBR1Q14596 966 aa22.2■■□□□ 1.14
CCNA2-202ENST00000618014 ANO8Q9HCE9 1232 aaPredicted RBP22.18■■□□□ 1.14
CCNA2-202ENST00000618014 B4GALNT3Q6L9W6 998 aa22.18■■□□□ 1.14
CCNA2-202ENST00000618014 PAK3O75914 559 aaPredicted RBP22.17■■□□□ 1.14
CCNA2-202ENST00000618014 FHAD1B1AJZ9 1412 aa22.17■■□□□ 1.14
CCNA2-202ENST00000618014 CFAP43Q8NDM7 1665 aa22.14■■□□□ 1.13
CCNA2-202ENST00000618014 CUX1P39880 1505 aa22.14■■□□□ 1.13
CCNA2-202ENST00000618014 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.13■■□□□ 1.13
CCNA2-202ENST00000618014 ZBED9Q6R2W3 1325 aa22.07■■□□□ 1.12
CCNA2-202ENST00000618014 RTL5Q5HYW3 569 aaPredicted RBP22.06■■□□□ 1.12
CCNA2-202ENST00000618014 IPO9Q96P70 1041 aaKnown RBP22.06■■□□□ 1.12
CCNA2-202ENST00000618014 WASHC2AQ641Q2 1341 aa22.05■■□□□ 1.12
CCNA2-202ENST00000618014 KDM5BQ9UGL1 1544 aa22.05■■□□□ 1.12
CCNA2-202ENST00000618014 ANP32AP39687 249 aaKnown RBP22.04■■□□□ 1.12
CCNA2-202ENST00000618014 UACAQ9BZF9 1416 aa22.03■■□□□ 1.12
CCNA2-202ENST00000618014 NCOA2Q15596 1464 aa22.03■■□□□ 1.12
CCNA2-202ENST00000618014 SALL2Q9Y467 1007 aaPredicted RBP22.03■■□□□ 1.12
CCNA2-202ENST00000618014 CCDC18Q5T9S5 1454 aa22.03■■□□□ 1.12
CCNA2-202ENST00000618014 CCDC184Q52MB2 194 aa22.01■■□□□ 1.11
CCNA2-202ENST00000618014 CNTLNQ9NXG0 1405 aa22.01■■□□□ 1.11
CCNA2-202ENST00000618014 PCF11O94913 1555 aaKnown RBP21.99■■□□□ 1.11
CCNA2-202ENST00000618014 ZBTB47Q9UFB7 747 aaPredicted RBP21.99■■□□□ 1.11
CCNA2-202ENST00000618014 HSPA5P11021 654 aaKnown RBP21.97■■□□□ 1.11
CCNA2-202ENST00000618014 CFTRP13569 1480 aa21.97■■□□□ 1.11
CCNA2-202ENST00000618014 HFM1A2PYH4 1435 aa21.96■■□□□ 1.11
CCNA2-202ENST00000618014 IGF1RP08069 1367 aa21.95■■□□□ 1.1
CCNA2-202ENST00000618014 FAM9BQ8IZU0 186 aa21.95■■□□□ 1.1
CCNA2-202ENST00000618014 PRKRIP1Q9H875 184 aaPredicted RBP21.95■■□□□ 1.1
CCNA2-202ENST00000618014 PTPN23Q9H3S7 1636 aa21.94■■□□□ 1.1
CCNA2-202ENST00000618014 IL27Q8NEV9 243 aa21.92■■□□□ 1.1
CCNA2-202ENST00000618014 MRS2Q9HD23 443 aa21.92■■□□□ 1.1
CCNA2-202ENST00000618014 FGD6Q6ZV73 1430 aa21.9■■□□□ 1.1
CCNA2-202ENST00000618014 EIF4G2P78344 907 aaKnown RBP eCLIP21.89■■□□□ 1.1
CCNA2-202ENST00000618014 SMG6Q86US8 1419 aaKnown RBP21.89■■□□□ 1.09
CCNA2-202ENST00000618014 FYCO1Q9BQS8 1478 aa21.88■■□□□ 1.09
CCNA2-202ENST00000618014 CADPSQ9ULU8 1353 aa21.88■■□□□ 1.09
CCNA2-202ENST00000618014 RNF123Q5XPI4 1314 aa21.87■■□□□ 1.09
CCNA2-202ENST00000618014 CCDC136Q96JN2 1154 aa21.87■■□□□ 1.09
CCNA2-202ENST00000618014 CARMIL1Q5VZK9 1371 aa21.87■■□□□ 1.09
CCNA2-202ENST00000618014 DNAJC5BQ9UF47 199 aa21.86■■□□□ 1.09
CCNA2-202ENST00000618014 PTPRKQ15262 1439 aa21.85■■□□□ 1.09
CCNA2-202ENST00000618014 NAIPQ13075 1403 aa21.84■■□□□ 1.09
CCNA2-202ENST00000618014 NCOA1Q15788 1441 aa21.84■■□□□ 1.09
CCNA2-202ENST00000618014 CCDC7Q96M83 1385 aa21.83■■□□□ 1.09
CCNA2-202ENST00000618014 AKNAQ7Z591 1439 aa21.83■■□□□ 1.09
CCNA2-202ENST00000618014 ATP1B4Q9UN42 357 aaPredicted RBP21.83■■□□□ 1.08
CCNA2-202ENST00000618014 CASKIN1Q8WXD9 1431 aa21.83■■□□□ 1.08
CCNA2-202ENST00000618014 USP35Q9P2H5 1018 aa21.82■■□□□ 1.08
CCNA2-202ENST00000618014 AQRO60306 1485 aaKnown RBP eCLIP21.82■■□□□ 1.089e-7■■■□□ 19.2
CCNA2-202ENST00000618014 FMN1Q68DA7 1419 aa21.8■■□□□ 1.08
CCNA2-202ENST00000618014 FGD5Q6ZNL6 1462 aa21.8■■□□□ 1.08
CCNA2-202ENST00000618014 NUDCQ9Y266 331 aa21.8■■□□□ 1.08
CCNA2-202ENST00000618014 PRDM2Q13029 1718 aa21.79■■□□□ 1.08
CCNA2-202ENST00000618014 RTN4Q9NQC3 1192 aaKnown RBP21.78■■□□□ 1.08
CCNA2-202ENST00000618014 C11orf95C9JLR9 678 aaPredicted RBP21.78■■□□□ 1.08
CCNA2-202ENST00000618014 P3H3Q8IVL6 736 aa21.77■■□□□ 1.08
CCNA2-202ENST00000618014 FHOD3Q2V2M9 1422 aa21.76■■□□□ 1.07
CCNA2-202ENST00000618014 WASHC2CQ9Y4E1 1318 aa21.75■■□□□ 1.07
CCNA2-202ENST00000618014 EFCAB5A4FU69 1503 aa21.75■■□□□ 1.07
CCNA2-202ENST00000618014 ABCA5Q8WWZ7 1642 aa21.74■■□□□ 1.07
CCNA2-202ENST00000618014 POLR1AO95602 1720 aaPredicted RBP21.73■■□□□ 1.07
CCNA2-202ENST00000618014 NEFMP07197 916 aa21.72■■□□□ 1.07
CCNA2-202ENST00000618014 UBE2Q2Q8WVN8 375 aa21.71■■□□□ 1.07
CCNA2-202ENST00000618014 NESP48681 1621 aa21.71■■□□□ 1.07
CCNA2-202ENST00000618014 HECW1Q76N89 1606 aa21.71■■□□□ 1.07
CCNA2-202ENST00000618014 DENND4BO75064 1496 aaPredicted RBP21.69■■□□□ 1.06
CCNA2-202ENST00000618014 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.68■■□□□ 1.06
CCNA2-202ENST00000618014 PPM1GO15355 546 aaPredicted RBP21.67■■□□□ 1.06
CCNA2-202ENST00000618014 MTUS2Q5JR59 1369 aa21.66■■□□□ 1.06
CCNA2-202ENST00000618014 MYOM3Q5VTT5 1437 aa21.66■■□□□ 1.06
CCNA2-202ENST00000618014 KIF7Q2M1P5 1343 aa21.65■■□□□ 1.06
CCNA2-202ENST00000618014 TCERG1O14776 1098 aaKnown RBP21.65■■□□□ 1.06
CCNA2-202ENST00000618014 L3MBTL2Q969R5 705 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms