RNA–Protein interactions for RNA: ENST00000617948.4

DEF8-229, Transcript of differentially expressed in FDCP 8 homolog, humanhuman

APPRIS P4 TSL 5 BASIC

Gene DEF8, Length 3,883 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEF8-229ENST00000617948 TOPBP1Q92547 1522 aa16.28■□□□□ 0.2
DEF8-229ENST00000617948 JPH4Q96JJ6 628 aa16.27■□□□□ 0.2
DEF8-229ENST00000617948 POLA1P09884 1462 aaPredicted RBP16.27■□□□□ 0.19
DEF8-229ENST00000617948 FHOD3Q2V2M9 1422 aa16.27■□□□□ 0.19
DEF8-229ENST00000617948 POLR3GLQ9BT43 218 aa16.26■□□□□ 0.19
DEF8-229ENST00000617948 PLEKHD1A6NEE1 506 aa16.25■□□□□ 0.19
DEF8-229ENST00000617948 RRP7BPQ9NSQ0 103 aa16.24■□□□□ 0.19
DEF8-229ENST00000617948 ZNF326Q5BKZ1 582 aaKnown RBP16.22■□□□□ 0.19
DEF8-229ENST00000617948 DIEXFQ68CQ4 756 aaKnown RBP16.21■□□□□ 0.19
DEF8-229ENST00000617948 PLPPR3Q6T4P5 718 aa16.19■□□□□ 0.18
DEF8-229ENST00000617948 MRC2Q9UBG0 1479 aa16.17■□□□□ 0.18
DEF8-229ENST00000617948 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.17■□□□□ 0.18
DEF8-229ENST00000617948 GTF3C3Q9Y5Q9 886 aa16.17■□□□□ 0.18
DEF8-229ENST00000617948 VPS8Q8N3P4 1428 aa16.16■□□□□ 0.18
DEF8-229ENST00000617948 TOP2BQ02880 1626 aa16.16■□□□□ 0.18
DEF8-229ENST00000617948 URB2Q14146 1524 aaKnown RBP16.15■□□□□ 0.18
DEF8-229ENST00000617948 CFDP1Q9UEE9 299 aaPredicted RBP16.14■□□□□ 0.17
DEF8-229ENST00000617948 LAMC3Q9Y6N6 1575 aa16.12■□□□□ 0.17
DEF8-229ENST00000617948 CYB5RLQ6IPT4 315 aa16.11■□□□□ 0.17
DEF8-229ENST00000617948 ZNF608Q9ULD9 1512 aaPredicted RBP16.1■□□□□ 0.17
DEF8-229ENST00000617948 TSPY4P0CV99 314 aa16.1■□□□□ 0.17
DEF8-229ENST00000617948 TSPY10P0CW01 314 aa16.1■□□□□ 0.17
DEF8-229ENST00000617948 SENP3Q9H4L4 574 aaPredicted RBP16.09■□□□□ 0.17
DEF8-229ENST00000617948 FHAD1B1AJZ9 1412 aa16.07■□□□□ 0.16
DEF8-229ENST00000617948 DNMBPQ6XZF7 1577 aa16.06■□□□□ 0.16
DEF8-229ENST00000617948 OSCARQ8IYS5 282 aa16.06■□□□□ 0.16
DEF8-229ENST00000617948 ACIN1Q9UKV3 1341 aaKnown RBP16.06■□□□□ 0.16
DEF8-229ENST00000617948 CARMIL2Q6F5E8 1435 aa16.04■□□□□ 0.16
DEF8-229ENST00000617948 GRIN2BQ13224 1484 aa16.03■□□□□ 0.16
DEF8-229ENST00000617948 PRXQ9BXM0 1461 aa16.02■□□□□ 0.15
DEF8-229ENST00000617948 SNAPC4Q5SXM2 1469 aa16■□□□□ 0.15
DEF8-229ENST00000617948 IFT140Q96RY7 1462 aa15.99■□□□□ 0.15
DEF8-229ENST00000617948 TRHP20396 242 aaPredicted RBP15.98■□□□□ 0.15
DEF8-229ENST00000617948 HIRIP3Q9BW71 556 aaPredicted RBP15.98■□□□□ 0.15
DEF8-229ENST00000617948 FMN1Q68DA7 1419 aa15.98■□□□□ 0.15
DEF8-229ENST00000617948 CHGAP10645 457 aaKnown RBP15.97■□□□□ 0.15
DEF8-229ENST00000617948 ARAP1Q96P48 1450 aa15.97■□□□□ 0.15
DEF8-229ENST00000617948 CCNB3Q8WWL7 1395 aa15.97■□□□□ 0.15
DEF8-229ENST00000617948 PTPRGP23470 1445 aa15.96■□□□□ 0.14
DEF8-229ENST00000617948 ABCA10Q8WWZ4 1543 aa15.96■□□□□ 0.14
DEF8-229ENST00000617948 SIN3AQ96ST3 1273 aa15.93■□□□□ 0.14
DEF8-229ENST00000617948 SLC4A1APQ9BWU0 796 aaKnown RBP15.93■□□□□ 0.14
DEF8-229ENST00000617948 ARHGAP35Q9NRY4 1499 aa15.92■□□□□ 0.14
DEF8-229ENST00000617948 KIF21BO75037 1637 aa15.92■□□□□ 0.14
DEF8-229ENST00000617948 KDM2AQ9Y2K7 1162 aa15.91■□□□□ 0.14
DEF8-229ENST00000617948 HNRNPMP52272 730 aaKnown RBP eCLIP15.91■□□□□ 0.142e-11■■■■■ 33
DEF8-229ENST00000617948 FOXD1Q16676 465 aa15.91■□□□□ 0.14
DEF8-229ENST00000617948 ZNF316A6NFI3 1004 aaPredicted RBP15.9■□□□□ 0.14
DEF8-229ENST00000617948 ZNF644Q9H582 1327 aaPredicted RBP15.89■□□□□ 0.13
DEF8-229ENST00000617948 KIF21AQ7Z4S6 1674 aa15.87■□□□□ 0.13
DEF8-229ENST00000617948 RGL3Q3MIN7 710 aa15.87■□□□□ 0.13
DEF8-229ENST00000617948 PRG4Q92954 1404 aaPredicted RBP15.86■□□□□ 0.13
DEF8-229ENST00000617948 ESF1Q9H501 851 aaKnown RBP15.84■□□□□ 0.13
DEF8-229ENST00000617948 BCANQ96GW7 911 aa15.84■□□□□ 0.13
DEF8-229ENST00000617948 MYT1Q01538 1121 aa15.83■□□□□ 0.13
DEF8-229ENST00000617948 MLECQ14165 292 aa15.83■□□□□ 0.13
DEF8-229ENST00000617948 TONSLQ96HA7 1378 aa15.82■□□□□ 0.12
DEF8-229ENST00000617948 BIVM-ERCC5R4GMW8 1640 aa15.82■□□□□ 0.12
DEF8-229ENST00000617948 ERICH3Q5RHP9 1530 aa15.81■□□□□ 0.12
DEF8-229ENST00000617948 ARID4BQ4LE39 1312 aaPredicted RBP15.79■□□□□ 0.12
DEF8-229ENST00000617948 PHLDB1Q86UU1 1377 aa15.77■□□□□ 0.12
DEF8-229ENST00000617948 STAG3Q9UJ98 1225 aa15.77■□□□□ 0.12
DEF8-229ENST00000617948 GGT6Q6P531 493 aa15.77■□□□□ 0.11
DEF8-229ENST00000617948 PRDM2Q13029 1718 aa15.76■□□□□ 0.11
DEF8-229ENST00000617948 EFCAB2Q5VUJ9 269 aa15.76■□□□□ 0.11
DEF8-229ENST00000617948 GRIN2AQ12879 1464 aa15.73■□□□□ 0.11
DEF8-229ENST00000617948 RAB3GAP2Q9H2M9 1393 aa15.73■□□□□ 0.11
DEF8-229ENST00000617948 MIER1Q8N108 512 aa15.72■□□□□ 0.11
DEF8-229ENST00000617948 SYNJ2O15056 1496 aa15.72■□□□□ 0.11
DEF8-229ENST00000617948 DDX10Q13206 875 aaKnown RBP15.7■□□□□ 0.1
DEF8-229ENST00000617948 KIAA0586Q9BVV6 1533 aa15.7■□□□□ 0.1
DEF8-229ENST00000617948 PLB1Q6P1J6 1458 aa15.7■□□□□ 0.1
DEF8-229ENST00000617948 CCDC18Q5T9S5 1454 aa15.68■□□□□ 0.1
DEF8-229ENST00000617948 FAM69CQ0P6D2 419 aa15.68■□□□□ 0.1
DEF8-229ENST00000617948 CASKIN1Q8WXD9 1431 aa15.67■□□□□ 0.1
DEF8-229ENST00000617948 SETD5Q9C0A6 1442 aa15.66■□□□□ 0.1
DEF8-229ENST00000617948 LRRC9Q6ZRR7 1453 aa15.66■□□□□ 0.1
DEF8-229ENST00000617948 PKD2Q13563 968 aa15.66■□□□□ 0.1
DEF8-229ENST00000617948 AFAP1Q8N556 730 aa15.66■□□□□ 0.1
DEF8-229ENST00000617948 CDK13Q14004 1512 aaKnown RBP15.66■□□□□ 0.1
DEF8-229ENST00000617948 KIF3BO15066 747 aa15.66■□□□□ 0.1
DEF8-229ENST00000617948 MAGI1Q96QZ7 1491 aaPredicted RBP15.64■□□□□ 0.09
DEF8-229ENST00000617948 IQGAP2Q13576 1575 aa15.63■□□□□ 0.09
DEF8-229ENST00000617948 MPHOSPH9Q99550 1183 aa15.62■□□□□ 0.09
DEF8-229ENST00000617948 SPAG9O60271 1321 aaKnown RBP15.62■□□□□ 0.09
DEF8-229ENST00000617948 NUP155O75694 1391 aa15.61■□□□□ 0.09
DEF8-229ENST00000617948 NCOA2Q15596 1464 aa15.59■□□□□ 0.09
DEF8-229ENST00000617948 WDR62O43379 1518 aa15.58■□□□□ 0.09
DEF8-229ENST00000617948 FGD6Q6ZV73 1430 aa15.57■□□□□ 0.08
DEF8-229ENST00000617948 CUL7Q14999 1698 aa15.57■□□□□ 0.08
DEF8-229ENST00000617948 EIF4G3O43432 1585 aaKnown RBP15.57■□□□□ 0.08
DEF8-229ENST00000617948 DCAF11Q8TEB1 546 aa15.57■□□□□ 0.08
DEF8-229ENST00000617948 FYCO1Q9BQS8 1478 aa15.55■□□□□ 0.08
DEF8-229ENST00000617948 MYOM3Q5VTT5 1437 aa15.54■□□□□ 0.08
DEF8-229ENST00000617948 NUTM2DQ5VT03 806 aaPredicted RBP15.54■□□□□ 0.08
DEF8-229ENST00000617948 ANKRD30AQ9BXX3 1397 aa15.54■□□□□ 0.08
DEF8-229ENST00000617948 RAPGEF3O95398 923 aa15.53■□□□□ 0.08
DEF8-229ENST00000617948 PCF11O94913 1555 aaKnown RBP15.53■□□□□ 0.08
DEF8-229ENST00000617948 SENP3-EIF4A1A0A087X0R7 540 aa15.53■□□□□ 0.08
DEF8-229ENST00000617948 EFCAB5A4FU69 1503 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms