RNA–Protein interactions for RNA: ENST00000617769.1

PCDHA13-203, Transcript of protocadherin alpha 13, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA13, Length 2,427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-203ENST00000617769 GAPVD1Q14C86 1478 aa29.65■■■□□ 2.34
PCDHA13-203ENST00000617769 ATP1B4Q9UN42 357 aaPredicted RBP29.62■■■□□ 2.33
PCDHA13-203ENST00000617769 CUL7Q14999 1698 aa29.61■■■□□ 2.33
PCDHA13-203ENST00000617769 ABCA5Q8WWZ7 1642 aa29.59■■■□□ 2.33
PCDHA13-203ENST00000617769 FHOD3Q2V2M9 1422 aa29.58■■■□□ 2.33
PCDHA13-203ENST00000617769 PELP1Q8IZL8 1130 aaKnown RBP29.57■■■□□ 2.32
PCDHA13-203ENST00000617769 GTF3C3Q9Y5Q9 886 aa29.57■■■□□ 2.32
PCDHA13-203ENST00000617769 TARBP1Q13395 1621 aaKnown RBP29.53■■■□□ 2.32
PCDHA13-203ENST00000617769 AQRO60306 1485 aaKnown RBP eCLIP29.5■■■□□ 2.31
PCDHA13-203ENST00000617769 MRC2Q9UBG0 1479 aa29.5■■■□□ 2.31
PCDHA13-203ENST00000617769 ITGAEP38570 1179 aa29.45■■■□□ 2.31
PCDHA13-203ENST00000617769 MIER1Q8N108 512 aa29.45■■■□□ 2.31
PCDHA13-203ENST00000617769 CTTNBP2Q8WZ74 1663 aa29.45■■■□□ 2.31
PCDHA13-203ENST00000617769 TIAM1Q13009 1591 aa29.45■■■□□ 2.3
PCDHA13-203ENST00000617769 FHAD1B1AJZ9 1412 aa29.44■■■□□ 2.3
PCDHA13-203ENST00000617769 PCF11O94913 1555 aaKnown RBP29.43■■■□□ 2.3
PCDHA13-203ENST00000617769 YTHDC1Q96MU7 727 aaKnown RBP29.42■■■□□ 2.3
PCDHA13-203ENST00000617769 DHX57Q6P158 1386 aaKnown RBP29.42■■■□□ 2.3
PCDHA13-203ENST00000617769 RRBP1Q9P2E9 1410 aaKnown RBP29.41■■■□□ 2.3
PCDHA13-203ENST00000617769 CCNB3Q8WWL7 1395 aa29.38■■■□□ 2.29
PCDHA13-203ENST00000617769 CLSPNQ9HAW4 1339 aa29.37■■■□□ 2.29
PCDHA13-203ENST00000617769 LRRC9Q6ZRR7 1453 aa29.37■■■□□ 2.29
PCDHA13-203ENST00000617769 EFCAB5A4FU69 1503 aa29.36■■■□□ 2.29
PCDHA13-203ENST00000617769 ZNF608Q9ULD9 1512 aaPredicted RBP29.34■■■□□ 2.29
PCDHA13-203ENST00000617769 MAP3K1Q13233 1512 aa29.32■■■□□ 2.28
PCDHA13-203ENST00000617769 PHLDB1Q86UU1 1377 aa29.3■■■□□ 2.28
PCDHA13-203ENST00000617769 ERCC6Q03468 1493 aa29.3■■■□□ 2.28
PCDHA13-203ENST00000617769 PBRM1Q86U86 1689 aa29.3■■■□□ 2.28
PCDHA13-203ENST00000617769 CASKIN1Q8WXD9 1431 aa29.27■■■□□ 2.28
PCDHA13-203ENST00000617769 WDR62O43379 1518 aa29.25■■■□□ 2.27
PCDHA13-203ENST00000617769 FYCO1Q9BQS8 1478 aa29.25■■■□□ 2.27
PCDHA13-203ENST00000617769 FMN1Q68DA7 1419 aa29.23■■■□□ 2.27
PCDHA13-203ENST00000617769 IFT140Q96RY7 1462 aa29.22■■■□□ 2.27
PCDHA13-203ENST00000617769 CFAP43Q8NDM7 1665 aa29.22■■■□□ 2.27
PCDHA13-203ENST00000617769 GRIN2BQ13224 1484 aa29.22■■■□□ 2.27
PCDHA13-203ENST00000617769 FAM50AQ14320 339 aaKnown RBP29.22■■■□□ 2.27
PCDHA13-203ENST00000617769 SAMD9Q5K651 1589 aa29.2■■■□□ 2.27
PCDHA13-203ENST00000617769 SNAPC4Q5SXM2 1469 aa29.19■■■□□ 2.26
PCDHA13-203ENST00000617769 ADAMTS12P58397 1594 aa29.19■■■□□ 2.26
PCDHA13-203ENST00000617769 MTUS2Q5JR59 1369 aa29.07■■■□□ 2.24
PCDHA13-203ENST00000617769 IQGAP2Q13576 1575 aa29.06■■■□□ 2.24
PCDHA13-203ENST00000617769 ARID3CA6NKF2 412 aa29.06■■■□□ 2.24
PCDHA13-203ENST00000617769 LRRIQ1Q96JM4 1722 aa29.05■■■□□ 2.24
PCDHA13-203ENST00000617769 EIF4G3O43432 1585 aaKnown RBP29.04■■■□□ 2.24
PCDHA13-203ENST00000617769 THOC2Q8NI27 1593 aaKnown RBP29.04■■■□□ 2.24
PCDHA13-203ENST00000617769 RAB3GAP2Q9H2M9 1393 aa29.03■■■□□ 2.24
PCDHA13-203ENST00000617769 FBLN2P98095 1184 aa29■■■□□ 2.23
PCDHA13-203ENST00000617769 CHMP7Q8WUX9 453 aaPredicted RBP28.94■■■□□ 2.22
PCDHA13-203ENST00000617769 GRIN2AQ12879 1464 aa28.92■■■□□ 2.22
PCDHA13-203ENST00000617769 SETD5Q9C0A6 1442 aa28.92■■■□□ 2.22
PCDHA13-203ENST00000617769 MAPKBP1O60336 1514 aa28.91■■■□□ 2.22
PCDHA13-203ENST00000617769 FGD6Q6ZV73 1430 aa28.9■■■□□ 2.22
PCDHA13-203ENST00000617769 NCOA2Q15596 1464 aa28.89■■■□□ 2.21
PCDHA13-203ENST00000617769 MAGI3Q5TCQ9 1506 aa28.88■■■□□ 2.21
PCDHA13-203ENST00000617769 KIAA0586Q9BVV6 1533 aa28.88■■■□□ 2.21
PCDHA13-203ENST00000617769 UGGT2Q9NYU1 1516 aa28.86■■■□□ 2.21
PCDHA13-203ENST00000617769 CDK13Q14004 1512 aaKnown RBP28.84■■■□□ 2.21
PCDHA13-203ENST00000617769 DISP1Q96F81 1524 aa28.82■■■□□ 2.2
PCDHA13-203ENST00000617769 EPRSP07814 1512 aaKnown RBP28.81■■■□□ 2.2
PCDHA13-203ENST00000617769 MAGI1Q96QZ7 1491 aaPredicted RBP28.8■■■□□ 2.2
PCDHA13-203ENST00000617769 HECW1Q76N89 1606 aa28.79■■■□□ 2.2
PCDHA13-203ENST00000617769 EHBP1L1Q8N3D4 1523 aa28.78■■■□□ 2.2
PCDHA13-203ENST00000617769 CCDC18Q5T9S5 1454 aa28.78■■■□□ 2.2
PCDHA13-203ENST00000617769 MYOM3Q5VTT5 1437 aa28.78■■■□□ 2.2
PCDHA13-203ENST00000617769 SYNJ2O15056 1496 aa28.77■■■□□ 2.2
PCDHA13-203ENST00000617769 PTPRKQ15262 1439 aa28.77■■■□□ 2.2
PCDHA13-203ENST00000617769 SUPT6HQ7KZ85 1726 aaKnown RBP28.77■■■□□ 2.2
PCDHA13-203ENST00000617769 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.76■■■□□ 2.2
PCDHA13-203ENST00000617769 KIAA0556O60303 1618 aa28.76■■■□□ 2.19
PCDHA13-203ENST00000617769 CEP170Q5SW79 1584 aa28.76■■■□□ 2.19
PCDHA13-203ENST00000617769 SIN3AQ96ST3 1273 aa28.72■■■□□ 2.19
PCDHA13-203ENST00000617769 JPH4Q96JJ6 628 aa28.67■■■□□ 2.18
PCDHA13-203ENST00000617769 ARHGEF11O15085 1522 aa28.66■■■□□ 2.18
PCDHA13-203ENST00000617769 CHIC2Q9UKJ5 165 aa28.65■■■□□ 2.18
PCDHA13-203ENST00000617769 PTPN23Q9H3S7 1636 aa28.63■■■□□ 2.17
PCDHA13-203ENST00000617769 NUP153P49790 1475 aaKnown RBP28.63■■■□□ 2.17
PCDHA13-203ENST00000617769 NUP160Q12769 1436 aa28.59■■■□□ 2.17
PCDHA13-203ENST00000617769 RRP7BPQ9NSQ0 103 aa28.59■■■□□ 2.17
PCDHA13-203ENST00000617769 PLB1Q6P1J6 1458 aa28.59■■■□□ 2.17
PCDHA13-203ENST00000617769 RAPGEF6Q8TEU7 1601 aa28.57■■■□□ 2.16
PCDHA13-203ENST00000617769 HFM1A2PYH4 1435 aa28.56■■■□□ 2.16
PCDHA13-203ENST00000617769 KCNH8Q96L42 1107 aa28.54■■■□□ 2.16
PCDHA13-203ENST00000617769 NAIPQ13075 1403 aa28.54■■■□□ 2.16
PCDHA13-203ENST00000617769 CARMIL2Q6F5E8 1435 aa28.5■■■□□ 2.15
PCDHA13-203ENST00000617769 TIMELESSQ9UNS1 1208 aa28.5■■■□□ 2.15
PCDHA13-203ENST00000617769 ZNF644Q9H582 1327 aaPredicted RBP28.5■■■□□ 2.15
PCDHA13-203ENST00000617769 PRG4Q92954 1404 aaPredicted RBP28.49■■■□□ 2.15
PCDHA13-203ENST00000617769 DDX10Q13206 875 aaKnown RBP28.49■■■□□ 2.15
PCDHA13-203ENST00000617769 TCOF1Q13428 1488 aaKnown RBP28.49■■■□□ 2.15
PCDHA13-203ENST00000617769 SUPT16HQ9Y5B9 1047 aaKnown RBP28.48■■■□□ 2.15
PCDHA13-203ENST00000617769 CDK11AQ9UQ88 783 aaPredicted RBP28.48■■■□□ 2.15
PCDHA13-203ENST00000617769 PPP1R15AO75807 674 aaPredicted RBP28.44■■■□□ 2.14
PCDHA13-203ENST00000617769 MIA2Q96PC5 1412 aa28.44■■■□□ 2.14
PCDHA13-203ENST00000617769 HIRIP3Q9BW71 556 aaPredicted RBP28.41■■■□□ 2.14
PCDHA13-203ENST00000617769 UACAQ9BZF9 1416 aa28.4■■■□□ 2.14
PCDHA13-203ENST00000617769 TRIM52Q96A61 297 aa28.37■■■□□ 2.13
PCDHA13-203ENST00000617769 TROQ12816 1431 aaPredicted RBP28.36■■■□□ 2.13
PCDHA13-203ENST00000617769 ZNF777Q9ULD5 760 aaPredicted RBP28.35■■■□□ 2.13
PCDHA13-203ENST00000617769 KDM6BO15054 1643 aa28.34■■■□□ 2.13
PCDHA13-203ENST00000617769 CFDP1Q9UEE9 299 aaPredicted RBP28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms