RNA–Protein interactions for RNA: ENST00000617753.4

LTBP4-235, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 4

Gene LTBP4, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-235ENST00000617753 PRG4Q92954 1404 aaPredicted RBP28.98■■■□□ 2.23
LTBP4-235ENST00000617753 JPH4Q96JJ6 628 aa28.98■■■□□ 2.23
LTBP4-235ENST00000617753 CARMIL1Q5VZK9 1371 aa28.94■■■□□ 2.22
LTBP4-235ENST00000617753 KIAA0586Q9BVV6 1533 aa28.9■■■□□ 2.22
LTBP4-235ENST00000617753 RAPGEF2Q9Y4G8 1499 aa28.72■■■□□ 2.19
LTBP4-235ENST00000617753 IQGAP2Q13576 1575 aa28.7■■■□□ 2.18
LTBP4-235ENST00000617753 CARMIL2Q6F5E8 1435 aa28.64■■■□□ 2.18
LTBP4-235ENST00000617753 NPM1P06748 294 aaKnown RBP eCLIP28.61■■■□□ 2.17
LTBP4-235ENST00000617753 ADCY10Q96PN6 1610 aa28.58■■■□□ 2.17
LTBP4-235ENST00000617753 PTPRGP23470 1445 aa28.58■■■□□ 2.17
LTBP4-235ENST00000617753 TTBK1Q5TCY1 1321 aaPredicted RBP28.57■■■□□ 2.16
LTBP4-235ENST00000617753 TNIKQ9UKE5 1360 aa28.56■■■□□ 2.16
LTBP4-235ENST00000617753 UGGT2Q9NYU1 1516 aa28.51■■■□□ 2.15
LTBP4-235ENST00000617753 MAPKBP1O60336 1514 aa28.49■■■□□ 2.15
LTBP4-235ENST00000617753 DISP1Q96F81 1524 aa28.49■■■□□ 2.15
LTBP4-235ENST00000617753 CTTNBP2Q8WZ74 1663 aa28.49■■■□□ 2.15
LTBP4-235ENST00000617753 PRXQ9BXM0 1461 aa28.49■■■□□ 2.15
LTBP4-235ENST00000617753 KIF13AQ9H1H9 1805 aa28.47■■■□□ 2.15
LTBP4-235ENST00000617753 KIAA0556O60303 1618 aa28.43■■■□□ 2.14
LTBP4-235ENST00000617753 ABCC10Q5T3U5 1492 aa28.42■■■□□ 2.14
LTBP4-235ENST00000617753 FAM69CQ0P6D2 419 aa28.39■■■□□ 2.14
LTBP4-235ENST00000617753 ABCC2Q92887 1545 aa28.38■■■□□ 2.13
LTBP4-235ENST00000617753 UACAQ9BZF9 1416 aa28.37■■■□□ 2.13
LTBP4-235ENST00000617753 CSRNP3Q8WYN3 585 aa28.37■■■□□ 2.13
LTBP4-235ENST00000617753 DIP2BQ9P265 1576 aa28.37■■■□□ 2.13
LTBP4-235ENST00000617753 UHRF1BP1LA0JNW5 1464 aa28.35■■■□□ 2.13
LTBP4-235ENST00000617753 EEA1Q15075 1411 aa28.35■■■□□ 2.13
LTBP4-235ENST00000617753 GOLGA3Q08378 1498 aa28.34■■■□□ 2.13
LTBP4-235ENST00000617753 ASXL2Q76L83 1435 aa28.25■■■□□ 2.11
LTBP4-235ENST00000617753 PLB1Q6P1J6 1458 aa28.24■■■□□ 2.11
LTBP4-235ENST00000617753 FAM9AQ8IZU1 332 aaPredicted RBP28.23■■■□□ 2.11
LTBP4-235ENST00000617753 KDM5BQ9UGL1 1544 aa28.23■■■□□ 2.11
LTBP4-235ENST00000617753 ZCCHC11Q5TAX3 1644 aaKnown RBP28.18■■■□□ 2.1
LTBP4-235ENST00000617753 TSPOAP1O95153 1857 aa28.17■■■□□ 2.1
LTBP4-235ENST00000617753 CHIC1Q5VXU3 224 aa28.15■■■□□ 2.1
LTBP4-235ENST00000617753 ABCA8O94911 1581 aa28.13■■■□□ 2.09
LTBP4-235ENST00000617753 GLI2P10070 1586 aa28.11■■■□□ 2.09
LTBP4-235ENST00000617753 P3H3Q8IVL6 736 aa28.11■■■□□ 2.09
LTBP4-235ENST00000617753 KIF21BO75037 1637 aa28.09■■■□□ 2.09
LTBP4-235ENST00000617753 SAMD9Q5K651 1589 aa28.07■■■□□ 2.08
LTBP4-235ENST00000617753 EPRSP07814 1512 aaKnown RBP28.07■■■□□ 2.08
LTBP4-235ENST00000617753 KDM6BO15054 1643 aa28.06■■■□□ 2.08
LTBP4-235ENST00000617753 WDR7Q9Y4E6 1490 aa28.04■■■□□ 2.08
LTBP4-235ENST00000617753 RANGAP1P46060 587 aaPredicted RBP28.03■■■□□ 2.08
LTBP4-235ENST00000617753 PPRC1Q5VV67 1664 aaKnown RBP27.97■■■□□ 2.07
LTBP4-235ENST00000617753 MAP3K4Q9Y6R4 1608 aa27.97■■■□□ 2.07
LTBP4-235ENST00000617753 ARID3CA6NKF2 412 aa27.94■■■□□ 2.06
LTBP4-235ENST00000617753 AEBP2Q6ZN18 517 aaPredicted RBP27.92■■■□□ 2.06
LTBP4-235ENST00000617753 EHMT2Q96KQ7 1210 aa27.92■■■□□ 2.06
LTBP4-235ENST00000617753 RAPGEF6Q8TEU7 1601 aa27.92■■■□□ 2.06
LTBP4-235ENST00000617753 FHOD3Q2V2M9 1422 aa27.92■■■□□ 2.06
LTBP4-235ENST00000617753 TEX14Q8IWB6 1497 aa27.91■■■□□ 2.06
LTBP4-235ENST00000617753 KCNH8Q96L42 1107 aa27.9■■■□□ 2.06
LTBP4-235ENST00000617753 EFCAB5A4FU69 1503 aa27.9■■■□□ 2.06
LTBP4-235ENST00000617753 UBTFP17480 764 aaKnown RBP27.89■■■□□ 2.06
LTBP4-235ENST00000617753 ATP10BO94823 1461 aa27.89■■■□□ 2.05
LTBP4-235ENST00000617753 CFAP43Q8NDM7 1665 aa27.84■■■□□ 2.05
LTBP4-235ENST00000617753 CD109Q6YHK3 1445 aa27.83■■■□□ 2.05
LTBP4-235ENST00000617753 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.82■■■□□ 2.04
LTBP4-235ENST00000617753 HNRNPUL2Q1KMD3 747 aaKnown RBP27.82■■■□□ 2.04
LTBP4-235ENST00000617753 NUP153P49790 1475 aaKnown RBP27.8■■■□□ 2.04
LTBP4-235ENST00000617753 MAGI3Q5TCQ9 1506 aa27.77■■■□□ 2.04
LTBP4-235ENST00000617753 COL17A1Q9UMD9 1497 aaPredicted RBP27.74■■■□□ 2.03
LTBP4-235ENST00000617753 ABCA9Q8IUA7 1624 aa27.68■■■□□ 2.02
LTBP4-235ENST00000617753 ARHGAP35Q9NRY4 1499 aa27.67■■■□□ 2.02
LTBP4-235ENST00000617753 FMN1Q68DA7 1419 aa27.65■■■□□ 2.02
LTBP4-235ENST00000617753 PLEKHD1A6NEE1 506 aa27.64■■■□□ 2.02
LTBP4-235ENST00000617753 ATP1B4Q9UN42 357 aaPredicted RBP27.59■■■□□ 2.01
LTBP4-235ENST00000617753 CDK13Q14004 1512 aaKnown RBP27.58■■■□□ 2.01
LTBP4-235ENST00000617753 HECW1Q76N89 1606 aa27.58■■■□□ 2.01
LTBP4-235ENST00000617753 KDM4FA0A1W2PPD8 638 aa27.55■■■□□ 2
LTBP4-235ENST00000617753 ARAP3Q8WWN8 1544 aa27.55■■■□□ 2
LTBP4-235ENST00000617753 PHLDB1Q86UU1 1377 aa27.54■■■□□ 2
LTBP4-235ENST00000617753 NEO1Q92859 1461 aa27.51■■■□□ 2
LTBP4-235ENST00000617753 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.47■■□□□ 1.99
LTBP4-235ENST00000617753 ADGRL1O94910 1474 aa27.47■■□□□ 1.99
LTBP4-235ENST00000617753 TTC37Q6PGP7 1564 aa27.45■■□□□ 1.99
LTBP4-235ENST00000617753 CDK11AQ9UQ88 783 aaPredicted RBP27.45■■□□□ 1.98
LTBP4-235ENST00000617753 CFAP74Q9C0B2 1584 aa27.41■■□□□ 1.98
LTBP4-235ENST00000617753 FANCAO15360 1455 aa27.4■■□□□ 1.98
LTBP4-235ENST00000617753 RAPGEF3O95398 923 aa27.4■■□□□ 1.98
LTBP4-235ENST00000617753 CLIP1P30622 1438 aa27.39■■□□□ 1.97
LTBP4-235ENST00000617753 PCF11O94913 1555 aaKnown RBP27.39■■□□□ 1.97
LTBP4-235ENST00000617753 CASKIN1Q8WXD9 1431 aa27.37■■□□□ 1.97
LTBP4-235ENST00000617753 AKNAQ7Z591 1439 aa27.36■■□□□ 1.97
LTBP4-235ENST00000617753 LRRIQ1Q96JM4 1722 aa27.36■■□□□ 1.97
LTBP4-235ENST00000617753 KIF14Q15058 1648 aa27.34■■□□□ 1.97
LTBP4-235ENST00000617753 TROQ12816 1431 aaPredicted RBP27.34■■□□□ 1.97
LTBP4-235ENST00000617753 FRMPD1Q5SYB0 1578 aa27.34■■□□□ 1.97
LTBP4-235ENST00000617753 DENND4BO75064 1496 aaPredicted RBP27.33■■□□□ 1.97
LTBP4-235ENST00000617753 CCDC18Q5T9S5 1454 aa27.33■■□□□ 1.97
LTBP4-235ENST00000617753 PLCH2O75038 1416 aa27.31■■□□□ 1.96
LTBP4-235ENST00000617753 FYCO1Q9BQS8 1478 aa27.3■■□□□ 1.96
LTBP4-235ENST00000617753 MYO5CQ9NQX4 1742 aa27.29■■□□□ 1.96
LTBP4-235ENST00000617753 RICTORQ6R327 1708 aa27.27■■□□□ 1.96
LTBP4-235ENST00000617753 EFCAB2Q5VUJ9 269 aa27.23■■□□□ 1.95
LTBP4-235ENST00000617753 ARHGEF40Q8TER5 1519 aa27.21■■□□□ 1.95
LTBP4-235ENST00000617753 SCAPERQ9BY12 1400 aa27.2■■□□□ 1.94
LTBP4-235ENST00000617753 ARHGAP5Q13017 1502 aa27.2■■□□□ 1.94
LTBP4-235ENST00000617753 ZMYM4Q5VZL5 1548 aa27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms