RNA–Protein interactions for RNA: ENST00000617556.4

CYFIP1-207, Transcript of cytoplasmic FMR1 interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene CYFIP1, Length 5,674 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYFIP1-207ENST00000617556 CFDP1Q9UEE9 299 aaPredicted RBP16.83■□□□□ 0.28
CYFIP1-207ENST00000617556 EIF4G1Q04637 1599 aaKnown RBP16.83■□□□□ 0.28
CYFIP1-207ENST00000617556 GTF3C3Q9Y5Q9 886 aa16.8■□□□□ 0.28
CYFIP1-207ENST00000617556 DDX10Q13206 875 aaKnown RBP16.77■□□□□ 0.28
CYFIP1-207ENST00000617556 MYT1Q01538 1121 aa16.75■□□□□ 0.27
CYFIP1-207ENST00000617556 VPS8Q8N3P4 1428 aa16.75■□□□□ 0.27
CYFIP1-207ENST00000617556 KDM2AQ9Y2K7 1162 aa16.73■□□□□ 0.27
CYFIP1-207ENST00000617556 CANXP27824 592 aaKnown RBP16.72■□□□□ 0.27
CYFIP1-207ENST00000617556 CCNB3Q8WWL7 1395 aa16.71■□□□□ 0.27
CYFIP1-207ENST00000617556 TDRD9Q8NDG6 1382 aaKnown RBP16.7■□□□□ 0.26
CYFIP1-207ENST00000617556 EIF4G2P78344 907 aaKnown RBP eCLIP16.68■□□□□ 0.26
CYFIP1-207ENST00000617556 CARMIL2Q6F5E8 1435 aa16.67■□□□□ 0.26
CYFIP1-207ENST00000617556 ZBTB47Q9UFB7 747 aaPredicted RBP16.67■□□□□ 0.26
CYFIP1-207ENST00000617556 PLPPR3Q6T4P5 718 aa16.66■□□□□ 0.26
CYFIP1-207ENST00000617556 RAPGEF2Q9Y4G8 1499 aa16.65■□□□□ 0.26
CYFIP1-207ENST00000617556 FMN1Q68DA7 1419 aa16.64■□□□□ 0.26
CYFIP1-207ENST00000617556 FANCD2Q9BXW9 1451 aa16.63■□□□□ 0.25
CYFIP1-207ENST00000617556 ARHGAP35Q9NRY4 1499 aa16.62■□□□□ 0.25
CYFIP1-207ENST00000617556 SLC24A1O60721 1099 aa16.61■□□□□ 0.25
CYFIP1-207ENST00000617556 HNRNPUQ00839 825 aaKnown RBP eCLIP16.61■□□□□ 0.25
CYFIP1-207ENST00000617556 FAM9BQ8IZU0 186 aa16.6■□□□□ 0.25
CYFIP1-207ENST00000617556 TMC1Q8TDI8 760 aa16.6■□□□□ 0.25
CYFIP1-207ENST00000617556 NCAPD3P42695 1498 aa16.58■□□□□ 0.24
CYFIP1-207ENST00000617556 RGL3Q3MIN7 710 aa16.54■□□□□ 0.24
CYFIP1-207ENST00000617556 RTL5Q5HYW3 569 aaPredicted RBP16.54■□□□□ 0.24
CYFIP1-207ENST00000617556 HIRIP3Q9BW71 556 aaPredicted RBP16.54■□□□□ 0.24
CYFIP1-207ENST00000617556 MRS2Q9HD23 443 aa16.54■□□□□ 0.24
CYFIP1-207ENST00000617556 KANK4Q5T7N3 995 aaPredicted RBP16.53■□□□□ 0.24
CYFIP1-207ENST00000617556 PPP1R15AO75807 674 aaPredicted RBP16.52■□□□□ 0.24
CYFIP1-207ENST00000617556 WDR43Q15061 677 aaKnown RBP eCLIP16.52■□□□□ 0.24
CYFIP1-207ENST00000617556 SETD5Q9C0A6 1442 aa16.51■□□□□ 0.23
CYFIP1-207ENST00000617556 MIER1Q8N108 512 aa16.5■□□□□ 0.23
CYFIP1-207ENST00000617556 CDCA8Q53HL2 280 aa16.49■□□□□ 0.23
CYFIP1-207ENST00000617556 TIMELESSQ9UNS1 1208 aa16.48■□□□□ 0.23
CYFIP1-207ENST00000617556 SIN3AQ96ST3 1273 aa16.48■□□□□ 0.23
CYFIP1-207ENST00000617556 FKBP8Q14318 412 aa16.47■□□□□ 0.23
CYFIP1-207ENST00000617556 CARD11Q9BXL7 1154 aa16.47■□□□□ 0.23
CYFIP1-207ENST00000617556 FHOD3Q2V2M9 1422 aa16.47■□□□□ 0.23
CYFIP1-207ENST00000617556 ARID4BQ4LE39 1312 aaPredicted RBP16.47■□□□□ 0.23
CYFIP1-207ENST00000617556 KANK1Q14678 1352 aa16.46■□□□□ 0.23
CYFIP1-207ENST00000617556 RUSC2Q8N2Y8 1516 aa16.46■□□□□ 0.22
CYFIP1-207ENST00000617556 FGD5Q6ZNL6 1462 aa16.44■□□□□ 0.22
CYFIP1-207ENST00000617556 SALL2Q9Y467 1007 aaPredicted RBP16.43■□□□□ 0.22
CYFIP1-207ENST00000617556 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.41■□□□□ 0.22
CYFIP1-207ENST00000617556 CCDC18Q5T9S5 1454 aa16.39■□□□□ 0.21
CYFIP1-207ENST00000617556 JPH4Q96JJ6 628 aa16.39■□□□□ 0.21
CYFIP1-207ENST00000617556 EFCAB2Q5VUJ9 269 aa16.38■□□□□ 0.21
CYFIP1-207ENST00000617556 GAPVD1Q14C86 1478 aa16.37■□□□□ 0.21
CYFIP1-207ENST00000617556 BCL11AQ9H165 835 aa16.37■□□□□ 0.21
CYFIP1-207ENST00000617556 ANKRD30AQ9BXX3 1397 aa16.36■□□□□ 0.21
CYFIP1-207ENST00000617556 KNSTRNQ9Y448 316 aa16.36■□□□□ 0.21
CYFIP1-207ENST00000617556 IGF1RP08069 1367 aa16.35■□□□□ 0.21
CYFIP1-207ENST00000617556 RAB3GAP2Q9H2M9 1393 aa16.35■□□□□ 0.21
CYFIP1-207ENST00000617556 ANP32AP39687 249 aaKnown RBP16.34■□□□□ 0.21
CYFIP1-207ENST00000617556 SENP3Q9H4L4 574 aaPredicted RBP16.34■□□□□ 0.21
CYFIP1-207ENST00000617556 HMGXB3Q12766 1538 aa16.33■□□□□ 0.21
CYFIP1-207ENST00000617556 RAD54L2Q9Y4B4 1467 aa16.32■□□□□ 0.2
CYFIP1-207ENST00000617556 DCAF11Q8TEB1 546 aa16.32■□□□□ 0.2
CYFIP1-207ENST00000617556 CFTRP13569 1480 aa16.32■□□□□ 0.2
CYFIP1-207ENST00000617556 PKD2Q13563 968 aa16.31■□□□□ 0.2
CYFIP1-207ENST00000617556 CFAP53Q96M91 514 aa16.31■□□□□ 0.2
CYFIP1-207ENST00000617556 RSPH4AQ5TD94 716 aa16.31■□□□□ 0.2
CYFIP1-207ENST00000617556 CCDC136Q96JN2 1154 aa16.28■□□□□ 0.2
CYFIP1-207ENST00000617556 MPHOSPH9Q99550 1183 aa16.28■□□□□ 0.2
CYFIP1-207ENST00000617556 C14orf37Q86TY3 774 aa16.28■□□□□ 0.2
CYFIP1-207ENST00000617556 POGKQ9P215 609 aa16.28■□□□□ 0.2
CYFIP1-207ENST00000617556 NUP155O75694 1391 aa16.26■□□□□ 0.19
CYFIP1-207ENST00000617556 CC2D2AQ9P2K1 1620 aa16.26■□□□□ 0.19
CYFIP1-207ENST00000617556 TMF1P82094 1093 aa16.26■□□□□ 0.19
CYFIP1-207ENST00000617556 HDGFP51858 240 aaKnown RBP16.25■□□□□ 0.19
CYFIP1-207ENST00000617556 PTPRGP23470 1445 aa16.24■□□□□ 0.19
CYFIP1-207ENST00000617556 GGT6Q6P531 493 aa16.23■□□□□ 0.19
CYFIP1-207ENST00000617556 SCAF1Q9H7N4 1312 aaKnown RBP16.23■□□□□ 0.19
CYFIP1-207ENST00000617556 TRHP20396 242 aaPredicted RBP16.22■□□□□ 0.19
CYFIP1-207ENST00000617556 HNRNPMP52272 730 aaKnown RBP eCLIP16.22■□□□□ 0.19
CYFIP1-207ENST00000617556 UPF2Q9HAU5 1272 aaKnown RBP16.22■□□□□ 0.19
CYFIP1-207ENST00000617556 NPM2Q86SE8 214 aaKnown RBP16.21■□□□□ 0.19
CYFIP1-207ENST00000617556 KIF21BO75037 1637 aa16.2■□□□□ 0.18
CYFIP1-207ENST00000617556 FOXD1Q16676 465 aa16.2■□□□□ 0.18
CYFIP1-207ENST00000617556 SYNJ1O43426 1573 aa16.2■□□□□ 0.18
CYFIP1-207ENST00000617556 MLECQ14165 292 aa16.19■□□□□ 0.18
CYFIP1-207ENST00000617556 ERICH3Q5RHP9 1530 aa16.19■□□□□ 0.18
CYFIP1-207ENST00000617556 SPAG9O60271 1321 aaKnown RBP16.19■□□□□ 0.18
CYFIP1-207ENST00000617556 HSPA5P11021 654 aaKnown RBP16.19■□□□□ 0.18
CYFIP1-207ENST00000617556 AQRO60306 1485 aaKnown RBP eCLIP16.18■□□□□ 0.183e-6■■■■■ 28.7
CYFIP1-207ENST00000617556 GRIN2BQ13224 1484 aa16.17■□□□□ 0.18
CYFIP1-207ENST00000617556 BICRAQ9NZM4 1560 aa16.17■□□□□ 0.18
CYFIP1-207ENST00000617556 ZBTB7CA1YPR0 619 aa16.17■□□□□ 0.18
CYFIP1-207ENST00000617556 NUDCQ9Y266 331 aa16.16■□□□□ 0.18
CYFIP1-207ENST00000617556 MRC2Q9UBG0 1479 aa16.16■□□□□ 0.18
CYFIP1-207ENST00000617556 TOP2BQ02880 1626 aa16.16■□□□□ 0.18
CYFIP1-207ENST00000617556 KIF3BO15066 747 aa16.14■□□□□ 0.17
CYFIP1-207ENST00000617556 NESP48681 1621 aa16.14■□□□□ 0.17
CYFIP1-207ENST00000617556 CC2D1BQ5T0F9 858 aaKnown RBP16.13■□□□□ 0.17
CYFIP1-207ENST00000617556 IRX6P78412 446 aaPredicted RBP16.13■□□□□ 0.17
CYFIP1-207ENST00000617556 PPM1GO15355 546 aaPredicted RBP16.13■□□□□ 0.17
CYFIP1-207ENST00000617556 MYH16Q9H6N6 1097 aa16.13■□□□□ 0.17
CYFIP1-207ENST00000617556 ROCK2O75116 1388 aaKnown RBP16.12■□□□□ 0.17
CYFIP1-207ENST00000617556 OSCARQ8IYS5 282 aa16.12■□□□□ 0.17
CYFIP1-207ENST00000617556 CCER2I3L3R5 266 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms