RNA–Protein interactions for RNA: ENST00000617408.1

PCDHA11-203, Transcript of protocadherin alpha 11, humanhuman

TSL 3

Gene PCDHA11, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-203ENST00000617408 PRG4Q92954 1404 aaPredicted RBP35.64■■■■□ 3.3
PCDHA11-203ENST00000617408 KIAA0586Q9BVV6 1533 aa35.62■■■■□ 3.29
PCDHA11-203ENST00000617408 JPH4Q96JJ6 628 aa35.6■■■■□ 3.29
PCDHA11-203ENST00000617408 RAPGEF2Q9Y4G8 1499 aa35.54■■■■□ 3.28
PCDHA11-203ENST00000617408 IQGAP2Q13576 1575 aa35.46■■■■□ 3.27
PCDHA11-203ENST00000617408 TRHP20396 242 aaPredicted RBP35.36■■■■□ 3.25
PCDHA11-203ENST00000617408 PRXQ9BXM0 1461 aa35.32■■■■□ 3.24
PCDHA11-203ENST00000617408 CTTNBP2Q8WZ74 1663 aa35.31■■■■□ 3.24
PCDHA11-203ENST00000617408 CARMIL2Q6F5E8 1435 aa35.27■■■■□ 3.24
PCDHA11-203ENST00000617408 EEA1Q15075 1411 aa35.23■■■■□ 3.23
PCDHA11-203ENST00000617408 UGGT2Q9NYU1 1516 aa35.2■■■■□ 3.23
PCDHA11-203ENST00000617408 CSRNP3Q8WYN3 585 aa35.19■■■■□ 3.22
PCDHA11-203ENST00000617408 CHIC1Q5VXU3 224 aa35.18■■■■□ 3.22
PCDHA11-203ENST00000617408 ADCY10Q96PN6 1610 aa35.17■■■■□ 3.22
PCDHA11-203ENST00000617408 DISP1Q96F81 1524 aa35.17■■■■□ 3.22
PCDHA11-203ENST00000617408 TNIKQ9UKE5 1360 aa35.16■■■■□ 3.22
PCDHA11-203ENST00000617408 TTBK1Q5TCY1 1321 aaPredicted RBP35.16■■■■□ 3.22
PCDHA11-203ENST00000617408 PTPRGP23470 1445 aa35.15■■■■□ 3.22
PCDHA11-203ENST00000617408 KIAA0556O60303 1618 aa35.14■■■■□ 3.22
PCDHA11-203ENST00000617408 FAM9AQ8IZU1 332 aaPredicted RBP35.11■■■■□ 3.21
PCDHA11-203ENST00000617408 NPM1P06748 294 aaKnown RBP eCLIP35.03■■■■□ 3.2
PCDHA11-203ENST00000617408 GOLGA3Q08378 1498 aa34.99■■■■□ 3.19
PCDHA11-203ENST00000617408 MAPKBP1O60336 1514 aa34.96■■■■□ 3.19
PCDHA11-203ENST00000617408 KIF21BO75037 1637 aa34.95■■■■□ 3.18
PCDHA11-203ENST00000617408 UACAQ9BZF9 1416 aa34.92■■■■□ 3.18
PCDHA11-203ENST00000617408 KIF13AQ9H1H9 1805 aa34.92■■■■□ 3.18
PCDHA11-203ENST00000617408 ABCC2Q92887 1545 aa34.9■■■■□ 3.18
PCDHA11-203ENST00000617408 UHRF1BP1LA0JNW5 1464 aa34.89■■■■□ 3.18
PCDHA11-203ENST00000617408 ABCC10Q5T3U5 1492 aa34.82■■■■□ 3.16
PCDHA11-203ENST00000617408 DIP2BQ9P265 1576 aa34.82■■■■□ 3.16
PCDHA11-203ENST00000617408 SAMD9Q5K651 1589 aa34.79■■■■□ 3.16
PCDHA11-203ENST00000617408 PLB1Q6P1J6 1458 aa34.77■■■■□ 3.16
PCDHA11-203ENST00000617408 ZCCHC11Q5TAX3 1644 aaKnown RBP34.74■■■■□ 3.15
PCDHA11-203ENST00000617408 FAM69CQ0P6D2 419 aa34.74■■■■□ 3.15
PCDHA11-203ENST00000617408 KDM5BQ9UGL1 1544 aa34.73■■■■□ 3.15
PCDHA11-203ENST00000617408 P3H3Q8IVL6 736 aa34.73■■■■□ 3.15
PCDHA11-203ENST00000617408 EHMT2Q96KQ7 1210 aa34.73■■■■□ 3.15
PCDHA11-203ENST00000617408 ABCA8O94911 1581 aa34.72■■■■□ 3.15
PCDHA11-203ENST00000617408 RANGAP1P46060 587 aaPredicted RBP34.72■■■■□ 3.15
PCDHA11-203ENST00000617408 ASXL2Q76L83 1435 aa34.71■■■■□ 3.15
PCDHA11-203ENST00000617408 UBTFP17480 764 aaKnown RBP34.61■■■■□ 3.13
PCDHA11-203ENST00000617408 EFCAB5A4FU69 1503 aa34.59■■■■□ 3.13
PCDHA11-203ENST00000617408 FHOD3Q2V2M9 1422 aa34.58■■■■□ 3.13
PCDHA11-203ENST00000617408 TSPOAP1O95153 1857 aa34.57■■■■□ 3.12
PCDHA11-203ENST00000617408 RAPGEF6Q8TEU7 1601 aa34.53■■■■□ 3.12
PCDHA11-203ENST00000617408 GLI2P10070 1586 aa34.52■■■■□ 3.12
PCDHA11-203ENST00000617408 WDR7Q9Y4E6 1490 aa34.51■■■■□ 3.11
PCDHA11-203ENST00000617408 EPRSP07814 1512 aaKnown RBP34.5■■■■□ 3.11
PCDHA11-203ENST00000617408 ARID3CA6NKF2 412 aa34.46■■■■□ 3.11
PCDHA11-203ENST00000617408 MAP3K4Q9Y6R4 1608 aa34.4■■■■□ 3.1
PCDHA11-203ENST00000617408 PPRC1Q5VV67 1664 aaKnown RBP34.39■■■■□ 3.1
PCDHA11-203ENST00000617408 ATP10BO94823 1461 aa34.39■■■■□ 3.1
PCDHA11-203ENST00000617408 NUP153P49790 1475 aaKnown RBP34.36■■■■□ 3.09
PCDHA11-203ENST00000617408 KDM6BO15054 1643 aa34.35■■■■□ 3.09
PCDHA11-203ENST00000617408 ARHGAP35Q9NRY4 1499 aa34.34■■■■□ 3.09
PCDHA11-203ENST00000617408 KCNH8Q96L42 1107 aa34.3■■■■□ 3.08
PCDHA11-203ENST00000617408 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.28■■■■□ 3.08
PCDHA11-203ENST00000617408 HNRNPUL2Q1KMD3 747 aaKnown RBP34.28■■■■□ 3.08
PCDHA11-203ENST00000617408 CFAP43Q8NDM7 1665 aa34.27■■■■□ 3.08
PCDHA11-203ENST00000617408 TEX14Q8IWB6 1497 aa34.24■■■■□ 3.07
PCDHA11-203ENST00000617408 FMN1Q68DA7 1419 aa34.23■■■■□ 3.07
PCDHA11-203ENST00000617408 HECW1Q76N89 1606 aa34.19■■■■□ 3.06
PCDHA11-203ENST00000617408 CD109Q6YHK3 1445 aa34.18■■■■□ 3.06
PCDHA11-203ENST00000617408 CDK13Q14004 1512 aaKnown RBP34.14■■■■□ 3.06
PCDHA11-203ENST00000617408 ABCA9Q8IUA7 1624 aa34.13■■■■□ 3.05
PCDHA11-203ENST00000617408 MAGI3Q5TCQ9 1506 aa34.12■■■■□ 3.05
PCDHA11-203ENST00000617408 ATP1B4Q9UN42 357 aaPredicted RBP34.1■■■■□ 3.05
PCDHA11-203ENST00000617408 CLIP1P30622 1438 aa34.06■■■■□ 3.04
PCDHA11-203ENST00000617408 PLEKHD1A6NEE1 506 aa34.05■■■■□ 3.04
PCDHA11-203ENST00000617408 PCF11O94913 1555 aaKnown RBP34.02■■■■□ 3.04
PCDHA11-203ENST00000617408 COL17A1Q9UMD9 1497 aaPredicted RBP34.01■■■■□ 3.04
PCDHA11-203ENST00000617408 LRRIQ1Q96JM4 1722 aa33.98■■■■□ 3.03
PCDHA11-203ENST00000617408 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.93■■■■□ 3.02
PCDHA11-203ENST00000617408 CASKIN1Q8WXD9 1431 aa33.92■■■■□ 3.02
PCDHA11-203ENST00000617408 TTC37Q6PGP7 1564 aa33.92■■■■□ 3.02
PCDHA11-203ENST00000617408 FYCO1Q9BQS8 1478 aa33.88■■■■□ 3.01
PCDHA11-203ENST00000617408 CEP162Q5TB80 1403 aa33.87■■■■□ 3.01
PCDHA11-203ENST00000617408 CDK11AQ9UQ88 783 aaPredicted RBP33.86■■■■□ 3.01
PCDHA11-203ENST00000617408 CCDC18Q5T9S5 1454 aa33.86■■■■□ 3.01
PCDHA11-203ENST00000617408 NEO1Q92859 1461 aa33.83■■■■□ 3.01
PCDHA11-203ENST00000617408 ARAP3Q8WWN8 1544 aa33.83■■■■□ 3.01
PCDHA11-203ENST00000617408 KIF14Q15058 1648 aa33.82■■■■□ 3.01
PCDHA11-203ENST00000617408 CFAP74Q9C0B2 1584 aa33.8■■■■□ 3
PCDHA11-203ENST00000617408 TROQ12816 1431 aaPredicted RBP33.79■■■■□ 3
PCDHA11-203ENST00000617408 PHLDB1Q86UU1 1377 aa33.79■■■■□ 3
PCDHA11-203ENST00000617408 AEBP2Q6ZN18 517 aaPredicted RBP33.76■■■□□ 2.99
PCDHA11-203ENST00000617408 FANCAO15360 1455 aa33.76■■■□□ 2.99
PCDHA11-203ENST00000617408 LOC105371045A0A1W2PR82 267 aa33.75■■■□□ 2.99
PCDHA11-203ENST00000617408 MYO5CQ9NQX4 1742 aa33.74■■■□□ 2.99
PCDHA11-203ENST00000617408 FRMPD1Q5SYB0 1578 aa33.68■■■□□ 2.98
PCDHA11-203ENST00000617408 AKNAQ7Z591 1439 aa33.67■■■□□ 2.98
PCDHA11-203ENST00000617408 PLCH2O75038 1416 aa33.66■■■□□ 2.98
PCDHA11-203ENST00000617408 RAPGEF3O95398 923 aa33.64■■■□□ 2.98
PCDHA11-203ENST00000617408 DENND4BO75064 1496 aaPredicted RBP33.61■■■□□ 2.97
PCDHA11-203ENST00000617408 RICTORQ6R327 1708 aa33.6■■■□□ 2.97
PCDHA11-203ENST00000617408 ARHGAP5Q13017 1502 aa33.59■■■□□ 2.97
PCDHA11-203ENST00000617408 ADGRL1O94910 1474 aa33.58■■■□□ 2.97
PCDHA11-203ENST00000617408 KDM4FA0A1W2PPD8 638 aa33.56■■■□□ 2.96
PCDHA11-203ENST00000617408 PREX2Q70Z35 1606 aa33.54■■■□□ 2.96
PCDHA11-203ENST00000617408 CDC42BPBQ9Y5S2 1711 aa33.53■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms