RNA–Protein interactions for RNA: ENST00000616789.4

UPK1A-203, Transcript of uroplakin 1A, humanhuman

TSL 5 BASIC

Gene UPK1A, Length 1,366 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-203ENST00000616789 JPH4Q96JJ6 628 aa23.36■■□□□ 1.33
UPK1A-203ENST00000616789 KIAA0586Q9BVV6 1533 aa23.34■■□□□ 1.33
UPK1A-203ENST00000616789 PRG4Q92954 1404 aaPredicted RBP23.29■■□□□ 1.32
UPK1A-203ENST00000616789 RAPGEF2Q9Y4G8 1499 aa23.27■■□□□ 1.32
UPK1A-203ENST00000616789 PRXQ9BXM0 1461 aa23.23■■□□□ 1.31
UPK1A-203ENST00000616789 CHIC1Q5VXU3 224 aa23.2■■□□□ 1.3
UPK1A-203ENST00000616789 IQGAP2Q13576 1575 aa23.15■■□□□ 1.3
UPK1A-203ENST00000616789 CSRNP3Q8WYN3 585 aa23.13■■□□□ 1.29
UPK1A-203ENST00000616789 EEA1Q15075 1411 aa23.08■■□□□ 1.29
UPK1A-203ENST00000616789 DISP1Q96F81 1524 aa23.08■■□□□ 1.29
UPK1A-203ENST00000616789 UGGT2Q9NYU1 1516 aa23.08■■□□□ 1.29
UPK1A-203ENST00000616789 CTTNBP2Q8WZ74 1663 aa23.04■■□□□ 1.28
UPK1A-203ENST00000616789 CARMIL2Q6F5E8 1435 aa23■■□□□ 1.27
UPK1A-203ENST00000616789 ADCY10Q96PN6 1610 aa23■■□□□ 1.27
UPK1A-203ENST00000616789 TNIKQ9UKE5 1360 aa22.99■■□□□ 1.27
UPK1A-203ENST00000616789 PTPRGP23470 1445 aa22.98■■□□□ 1.27
UPK1A-203ENST00000616789 FAM9AQ8IZU1 332 aaPredicted RBP22.96■■□□□ 1.27
UPK1A-203ENST00000616789 KIAA0556O60303 1618 aa22.95■■□□□ 1.27
UPK1A-203ENST00000616789 TRHP20396 242 aaPredicted RBP22.95■■□□□ 1.26
UPK1A-203ENST00000616789 KIF21BO75037 1637 aa22.9■■□□□ 1.26
UPK1A-203ENST00000616789 UHRF1BP1LA0JNW5 1464 aa22.87■■□□□ 1.25
UPK1A-203ENST00000616789 MAPKBP1O60336 1514 aa22.85■■□□□ 1.25
UPK1A-203ENST00000616789 GOLGA3Q08378 1498 aa22.84■■□□□ 1.25
UPK1A-203ENST00000616789 TTBK1Q5TCY1 1321 aaPredicted RBP22.84■■□□□ 1.25
UPK1A-203ENST00000616789 UACAQ9BZF9 1416 aa22.84■■□□□ 1.25
UPK1A-203ENST00000616789 KIF13AQ9H1H9 1805 aa22.82■■□□□ 1.24
UPK1A-203ENST00000616789 ABCC2Q92887 1545 aa22.82■■□□□ 1.24
UPK1A-203ENST00000616789 SAMD9Q5K651 1589 aa22.8■■□□□ 1.24
UPK1A-203ENST00000616789 NPM1P06748 294 aaKnown RBP eCLIP22.79■■□□□ 1.24
UPK1A-203ENST00000616789 ABCC10Q5T3U5 1492 aa22.77■■□□□ 1.24
UPK1A-203ENST00000616789 KDM5BQ9UGL1 1544 aa22.77■■□□□ 1.24
UPK1A-203ENST00000616789 PLB1Q6P1J6 1458 aa22.76■■□□□ 1.23
UPK1A-203ENST00000616789 ABCA8O94911 1581 aa22.75■■□□□ 1.23
UPK1A-203ENST00000616789 DIP2BQ9P265 1576 aa22.72■■□□□ 1.23
UPK1A-203ENST00000616789 P3H3Q8IVL6 736 aa22.72■■□□□ 1.23
UPK1A-203ENST00000616789 ASXL2Q76L83 1435 aa22.68■■□□□ 1.22
UPK1A-203ENST00000616789 FAM69CQ0P6D2 419 aa22.68■■□□□ 1.22
UPK1A-203ENST00000616789 ZCCHC11Q5TAX3 1644 aaKnown RBP22.68■■□□□ 1.22
UPK1A-203ENST00000616789 EHMT2Q96KQ7 1210 aa22.63■■□□□ 1.21
UPK1A-203ENST00000616789 UBTFP17480 764 aaKnown RBP22.62■■□□□ 1.21
UPK1A-203ENST00000616789 FHOD3Q2V2M9 1422 aa22.61■■□□□ 1.21
UPK1A-203ENST00000616789 RANGAP1P46060 587 aaPredicted RBP22.61■■□□□ 1.21
UPK1A-203ENST00000616789 EFCAB5A4FU69 1503 aa22.6■■□□□ 1.21
UPK1A-203ENST00000616789 GLI2P10070 1586 aa22.59■■□□□ 1.21
UPK1A-203ENST00000616789 ATP10BO94823 1461 aa22.57■■□□□ 1.2
UPK1A-203ENST00000616789 EPRSP07814 1512 aaKnown RBP22.57■■□□□ 1.2
UPK1A-203ENST00000616789 RAPGEF6Q8TEU7 1601 aa22.55■■□□□ 1.2
UPK1A-203ENST00000616789 ARHGAP35Q9NRY4 1499 aa22.55■■□□□ 1.2
UPK1A-203ENST00000616789 WDR7Q9Y4E6 1490 aa22.53■■□□□ 1.2
UPK1A-203ENST00000616789 NUP153P49790 1475 aaKnown RBP22.52■■□□□ 1.2
UPK1A-203ENST00000616789 PPRC1Q5VV67 1664 aaKnown RBP22.52■■□□□ 1.2
UPK1A-203ENST00000616789 TSPOAP1O95153 1857 aa22.5■■□□□ 1.19
UPK1A-203ENST00000616789 MAP3K4Q9Y6R4 1608 aa22.49■■□□□ 1.19
UPK1A-203ENST00000616789 ARID3CA6NKF2 412 aa22.47■■□□□ 1.19
UPK1A-203ENST00000616789 KCNH8Q96L42 1107 aa22.39■■□□□ 1.18
UPK1A-203ENST00000616789 FMN1Q68DA7 1419 aa22.38■■□□□ 1.17
UPK1A-203ENST00000616789 CFAP43Q8NDM7 1665 aa22.36■■□□□ 1.17
UPK1A-203ENST00000616789 COL17A1Q9UMD9 1497 aaPredicted RBP22.35■■□□□ 1.17
UPK1A-203ENST00000616789 MAGI3Q5TCQ9 1506 aa22.34■■□□□ 1.17
UPK1A-203ENST00000616789 CD109Q6YHK3 1445 aa22.33■■□□□ 1.17
UPK1A-203ENST00000616789 KDM6BO15054 1643 aa22.33■■□□□ 1.16
UPK1A-203ENST00000616789 ABCA9Q8IUA7 1624 aa22.32■■□□□ 1.16
UPK1A-203ENST00000616789 CDK13Q14004 1512 aaKnown RBP22.32■■□□□ 1.16
UPK1A-203ENST00000616789 LRRIQ1Q96JM4 1722 aa22.3■■□□□ 1.16
UPK1A-203ENST00000616789 CLIP1P30622 1438 aa22.3■■□□□ 1.16
UPK1A-203ENST00000616789 TEX14Q8IWB6 1497 aa22.28■■□□□ 1.16
UPK1A-203ENST00000616789 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.28■■□□□ 1.16
UPK1A-203ENST00000616789 HNRNPUL2Q1KMD3 747 aaKnown RBP22.28■■□□□ 1.16
UPK1A-203ENST00000616789 HECW1Q76N89 1606 aa22.28■■□□□ 1.16
UPK1A-203ENST00000616789 PLEKHD1A6NEE1 506 aa22.27■■□□□ 1.16
UPK1A-203ENST00000616789 LOC105371045A0A1W2PR82 267 aa22.25■■□□□ 1.15
UPK1A-203ENST00000616789 CASKIN1Q8WXD9 1431 aa22.24■■□□□ 1.15
UPK1A-203ENST00000616789 PCF11O94913 1555 aaKnown RBP22.22■■□□□ 1.15
UPK1A-203ENST00000616789 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.21■■□□□ 1.15
UPK1A-203ENST00000616789 ATP1B4Q9UN42 357 aaPredicted RBP22.19■■□□□ 1.14
UPK1A-203ENST00000616789 CEP162Q5TB80 1403 aa22.19■■□□□ 1.14
UPK1A-203ENST00000616789 TTC37Q6PGP7 1564 aa22.17■■□□□ 1.14
UPK1A-203ENST00000616789 ARAP3Q8WWN8 1544 aa22.16■■□□□ 1.14
UPK1A-203ENST00000616789 FYCO1Q9BQS8 1478 aa22.15■■□□□ 1.14
UPK1A-203ENST00000616789 TROQ12816 1431 aaPredicted RBP22.13■■□□□ 1.13
UPK1A-203ENST00000616789 NEO1Q92859 1461 aa22.12■■□□□ 1.13
UPK1A-203ENST00000616789 PHLDB1Q86UU1 1377 aa22.11■■□□□ 1.13
UPK1A-203ENST00000616789 KIF14Q15058 1648 aa22.11■■□□□ 1.13
UPK1A-203ENST00000616789 CCDC18Q5T9S5 1454 aa22.11■■□□□ 1.13
UPK1A-203ENST00000616789 CDK11AQ9UQ88 783 aaPredicted RBP22.11■■□□□ 1.13
UPK1A-203ENST00000616789 PLCH2O75038 1416 aa22.08■■□□□ 1.12
UPK1A-203ENST00000616789 FANCAO15360 1455 aa22.04■■□□□ 1.12
UPK1A-203ENST00000616789 AKNAQ7Z591 1439 aa22.04■■□□□ 1.12
UPK1A-203ENST00000616789 FRMPD1Q5SYB0 1578 aa22.03■■□□□ 1.12
UPK1A-203ENST00000616789 RAPGEF3O95398 923 aa22.02■■□□□ 1.12
UPK1A-203ENST00000616789 MYO5CQ9NQX4 1742 aa22■■□□□ 1.11
UPK1A-203ENST00000616789 KDM4FA0A1W2PPD8 638 aa21.99■■□□□ 1.11
UPK1A-203ENST00000616789 RICTORQ6R327 1708 aa21.98■■□□□ 1.11
UPK1A-203ENST00000616789 CFAP74Q9C0B2 1584 aa21.98■■□□□ 1.11
UPK1A-203ENST00000616789 CDC42BPBQ9Y5S2 1711 aa21.97■■□□□ 1.11
UPK1A-203ENST00000616789 DENND4BO75064 1496 aaPredicted RBP21.95■■□□□ 1.1
UPK1A-203ENST00000616789 EFCAB2Q5VUJ9 269 aa21.93■■□□□ 1.1
UPK1A-203ENST00000616789 VPS8Q8N3P4 1428 aa21.93■■□□□ 1.1
UPK1A-203ENST00000616789 CDC42BPAQ5VT25 1732 aa21.92■■□□□ 1.1
UPK1A-203ENST00000616789 PREX2Q70Z35 1606 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms