RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 B4GALNT3Q6L9W6 998 aa9.27□□□□□ -0.92
LMO3-235ENST00000616247 SENP3-EIF4A1A0A087X0R7 540 aa9.26□□□□□ -0.93
LMO3-235ENST00000616247 MAPK8IP2Q13387 824 aaPredicted RBP9.26□□□□□ -0.93
LMO3-235ENST00000616247 RTN4Q9NQC3 1192 aaKnown RBP9.26□□□□□ -0.93
LMO3-235ENST00000616247 RTL5Q5HYW3 569 aaPredicted RBP9.26□□□□□ -0.93
LMO3-235ENST00000616247 SMARCA4P51532 1647 aa9.25□□□□□ -0.93
LMO3-235ENST00000616247 RAPGEF2Q9Y4G8 1499 aa9.25□□□□□ -0.93
LMO3-235ENST00000616247 BAZ1AQ9NRL2 1556 aaPredicted RBP9.25□□□□□ -0.93
LMO3-235ENST00000616247 FAM9BQ8IZU0 186 aa9.25□□□□□ -0.93
LMO3-235ENST00000616247 P3H3Q8IVL6 736 aa9.24□□□□□ -0.93
LMO3-235ENST00000616247 RAB3GAP2Q9H2M9 1393 aa9.23□□□□□ -0.93
LMO3-235ENST00000616247 ANO8Q9HCE9 1232 aaPredicted RBP9.23□□□□□ -0.93
LMO3-235ENST00000616247 CCNB3Q8WWL7 1395 aa9.22□□□□□ -0.93
LMO3-235ENST00000616247 FANCIQ9NVI1 1328 aa9.22□□□□□ -0.93
LMO3-235ENST00000616247 PPP1R15AO75807 674 aaPredicted RBP9.21□□□□□ -0.93
LMO3-235ENST00000616247 POLR3GLQ9BT43 218 aa9.21□□□□□ -0.93
LMO3-235ENST00000616247 CCER2I3L3R5 266 aa9.21□□□□□ -0.94
LMO3-235ENST00000616247 NPM2Q86SE8 214 aaKnown RBP9.2□□□□□ -0.94
LMO3-235ENST00000616247 CCDC136Q96JN2 1154 aa9.2□□□□□ -0.94
LMO3-235ENST00000616247 NOP58Q9Y2X3 529 aaKnown RBP9.2□□□□□ -0.94
LMO3-235ENST00000616247 EIF4G1Q04637 1599 aaKnown RBP9.19□□□□□ -0.94
LMO3-235ENST00000616247 PPP4R2Q9NY27 417 aa9.19□□□□□ -0.94
LMO3-235ENST00000616247 MYT1LQ9UL68 1186 aa9.18□□□□□ -0.94
LMO3-235ENST00000616247 TONSLQ96HA7 1378 aa9.18□□□□□ -0.94
LMO3-235ENST00000616247 TOP2AP11388 1531 aaKnown RBP9.18□□□□□ -0.94
LMO3-235ENST00000616247 PAK3O75914 559 aaPredicted RBP9.17□□□□□ -0.94
LMO3-235ENST00000616247 KIF21BO75037 1637 aa9.17□□□□□ -0.94
LMO3-235ENST00000616247 ANP32AP39687 249 aaKnown RBP9.17□□□□□ -0.94
LMO3-235ENST00000616247 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.16□□□□□ -0.94
LMO3-235ENST00000616247 DNAJC5BQ9UF47 199 aa9.16□□□□□ -0.94
LMO3-235ENST00000616247 SMARCA2P51531 1590 aa9.16□□□□□ -0.94
LMO3-235ENST00000616247 BAZ1BQ9UIG0 1483 aaKnown RBP9.16□□□□□ -0.94
LMO3-235ENST00000616247 ATAD2BQ9ULI0 1458 aa9.16□□□□□ -0.94
LMO3-235ENST00000616247 ZBTB47Q9UFB7 747 aaPredicted RBP9.15□□□□□ -0.94
LMO3-235ENST00000616247 MRS2Q9HD23 443 aa9.14□□□□□ -0.95
LMO3-235ENST00000616247 SALL2Q9Y467 1007 aaPredicted RBP9.14□□□□□ -0.95
LMO3-235ENST00000616247 PPP4R3CPQ6ZMV5 832 aa9.13□□□□□ -0.95
LMO3-235ENST00000616247 WDR97A6NE52 1622 aa9.13□□□□□ -0.95
LMO3-235ENST00000616247 SETD5Q9C0A6 1442 aa9.13□□□□□ -0.95
LMO3-235ENST00000616247 EIF5BO60841 1220 aaKnown RBP9.12□□□□□ -0.95
LMO3-235ENST00000616247 LAS1LQ9Y4W2 734 aaKnown RBP9.12□□□□□ -0.95
LMO3-235ENST00000616247 IL27Q8NEV9 243 aa9.11□□□□□ -0.95
LMO3-235ENST00000616247 CCDC184Q52MB2 194 aa9.1□□□□□ -0.95
LMO3-235ENST00000616247 CC2D2AQ9P2K1 1620 aa9.09□□□□□ -0.95
LMO3-235ENST00000616247 ARAP1Q96P48 1450 aa9.08□□□□□ -0.96
LMO3-235ENST00000616247 SYNJ1O43426 1573 aa9.08□□□□□ -0.96
LMO3-235ENST00000616247 RRBP1Q9P2E9 1410 aaKnown RBP9.08□□□□□ -0.96
LMO3-235ENST00000616247 PEG3Q9GZU2 1588 aa9.06□□□□□ -0.96
LMO3-235ENST00000616247 HSPA5P11021 654 aaKnown RBP9.06□□□□□ -0.96
LMO3-235ENST00000616247 CHIC2Q9UKJ5 165 aa9.06□□□□□ -0.96
LMO3-235ENST00000616247 NEFMP07197 916 aa9.06□□□□□ -0.96
LMO3-235ENST00000616247 HOXD11P31277 338 aaPredicted RBP9.05□□□□□ -0.96
LMO3-235ENST00000616247 CNKSR2Q8WXI2 1034 aa9.05□□□□□ -0.96
LMO3-235ENST00000616247 IPO9Q96P70 1041 aaKnown RBP9.05□□□□□ -0.96
LMO3-235ENST00000616247 ZNF326Q5BKZ1 582 aaKnown RBP9.04□□□□□ -0.96
LMO3-235ENST00000616247 EIF4G2P78344 907 aaKnown RBP eCLIP9.04□□□□□ -0.96
LMO3-235ENST00000616247 TIMELESSQ9UNS1 1208 aa9.04□□□□□ -0.96
LMO3-235ENST00000616247 NCAPD3P42695 1498 aa9.04□□□□□ -0.96
LMO3-235ENST00000616247 MAPKBP1O60336 1514 aa9.03□□□□□ -0.96
LMO3-235ENST00000616247 RRP7BPQ9NSQ0 103 aa9.03□□□□□ -0.96
LMO3-235ENST00000616247 ERICH6BQ5W0A0 696 aa9.02□□□□□ -0.97
LMO3-235ENST00000616247 PHLDB1Q86UU1 1377 aa9.02□□□□□ -0.97
LMO3-235ENST00000616247 DAXXQ9UER7 740 aaPredicted RBP9.01□□□□□ -0.97
LMO3-235ENST00000616247 WASHC2AQ641Q2 1341 aa9.01□□□□□ -0.97
LMO3-235ENST00000616247 ARID3CA6NKF2 412 aa8.99□□□□□ -0.97
LMO3-235ENST00000616247 PRKRIP1Q9H875 184 aaPredicted RBP8.99□□□□□ -0.97
LMO3-235ENST00000616247 RNF216Q9NWF9 866 aaPredicted RBP8.98□□□□□ -0.97
LMO3-235ENST00000616247 KIF27Q86VH2 1401 aa8.98□□□□□ -0.97
LMO3-235ENST00000616247 HMGXB3Q12766 1538 aa8.96□□□□□ -0.97
LMO3-235ENST00000616247 ARHGAP35Q9NRY4 1499 aa8.96□□□□□ -0.98
LMO3-235ENST00000616247 AKNAQ7Z591 1439 aa8.96□□□□□ -0.98
LMO3-235ENST00000616247 TMC1Q8TDI8 760 aa8.95□□□□□ -0.98
LMO3-235ENST00000616247 ZBED9Q6R2W3 1325 aa8.95□□□□□ -0.98
LMO3-235ENST00000616247 BRPF3Q9ULD4 1205 aa8.95□□□□□ -0.98
LMO3-235ENST00000616247 CUX2O14529 1486 aa8.95□□□□□ -0.98
LMO3-235ENST00000616247 C11orf95C9JLR9 678 aaPredicted RBP8.95□□□□□ -0.98
LMO3-235ENST00000616247 SLC4A3P48751 1232 aa8.94□□□□□ -0.98
LMO3-235ENST00000616247 PRXQ9BXM0 1461 aa8.94□□□□□ -0.98
LMO3-235ENST00000616247 L3MBTL2Q969R5 705 aa8.93□□□□□ -0.98
LMO3-235ENST00000616247 NUDCQ9Y266 331 aa8.93□□□□□ -0.98
LMO3-235ENST00000616247 MTUS2Q5JR59 1369 aa8.93□□□□□ -0.98
LMO3-235ENST00000616247 ARXQ96QS3 562 aa8.92□□□□□ -0.98
LMO3-235ENST00000616247 NESP48681 1621 aa8.92□□□□□ -0.98
LMO3-235ENST00000616247 SKAP1Q86WV1 359 aa8.91□□□□□ -0.98
LMO3-235ENST00000616247 EXOC6Q8TAG9 804 aa8.91□□□□□ -0.98
LMO3-235ENST00000616247 PDE4AP27815 886 aa8.9□□□□□ -0.98
LMO3-235ENST00000616247 LRRC9Q6ZRR7 1453 aa8.9□□□□□ -0.98
LMO3-235ENST00000616247 PPM1GO15355 546 aaPredicted RBP8.9□□□□□ -0.98
LMO3-235ENST00000616247 NCBP3Q53F19 620 aaKnown RBP8.9□□□□□ -0.99
LMO3-235ENST00000616247 CACNB1Q02641 598 aaPredicted RBP8.89□□□□□ -0.99
LMO3-235ENST00000616247 CARMIL1Q5VZK9 1371 aa8.89□□□□□ -0.99
LMO3-235ENST00000616247 CCDC18Q5T9S5 1454 aa8.89□□□□□ -0.99
LMO3-235ENST00000616247 DCAF8L1A6NGE4 600 aa8.88□□□□□ -0.99
LMO3-235ENST00000616247 FHOD3Q2V2M9 1422 aa8.88□□□□□ -0.99
LMO3-235ENST00000616247 CNTLNQ9NXG0 1405 aa8.87□□□□□ -0.99
LMO3-235ENST00000616247 ERICH3Q5RHP9 1530 aa8.87□□□□□ -0.99
LMO3-235ENST00000616247 CCDC7Q96M83 1385 aa8.86□□□□□ -0.99
LMO3-235ENST00000616247 PLIN1O60240 522 aa8.86□□□□□ -0.99
LMO3-235ENST00000616247 FHAD1B1AJZ9 1412 aa8.86□□□□□ -0.99
LMO3-235ENST00000616247 KIF7Q2M1P5 1343 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms