RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 IGF1RP08069 1367 aa36.4■■■■□ 3.42
TRAPPC3-208ENST00000616074 CUL7Q14999 1698 aa36.39■■■■□ 3.42
TRAPPC3-208ENST00000616074 KIAA0586Q9BVV6 1533 aa36.29■■■■□ 3.4
TRAPPC3-208ENST00000616074 KIF13AQ9H1H9 1805 aa36.24■■■■□ 3.39
TRAPPC3-208ENST00000616074 ADCY10Q96PN6 1610 aa36.16■■■■□ 3.38
TRAPPC3-208ENST00000616074 CARMIL1Q5VZK9 1371 aa36.15■■■■□ 3.38
TRAPPC3-208ENST00000616074 MAPKBP1O60336 1514 aa36.08■■■■□ 3.37
TRAPPC3-208ENST00000616074 NPM1P06748 294 aaKnown RBP eCLIP36.05■■■■□ 3.36
TRAPPC3-208ENST00000616074 ABCC10Q5T3U5 1492 aa36.03■■■■□ 3.36
TRAPPC3-208ENST00000616074 IQGAP2Q13576 1575 aa35.98■■■■□ 3.35
TRAPPC3-208ENST00000616074 DIP2BQ9P265 1576 aa35.98■■■■□ 3.35
TRAPPC3-208ENST00000616074 FAM69CQ0P6D2 419 aa35.96■■■■□ 3.35
TRAPPC3-208ENST00000616074 PTPRGP23470 1445 aa35.92■■■■□ 3.34
TRAPPC3-208ENST00000616074 CARMIL2Q6F5E8 1435 aa35.91■■■■□ 3.34
TRAPPC3-208ENST00000616074 AEBP2Q6ZN18 517 aaPredicted RBP35.88■■■■□ 3.33
TRAPPC3-208ENST00000616074 TNIKQ9UKE5 1360 aa35.88■■■■□ 3.33
TRAPPC3-208ENST00000616074 TTBK1Q5TCY1 1321 aaPredicted RBP35.86■■■■□ 3.33
TRAPPC3-208ENST00000616074 RAPGEF2Q9Y4G8 1499 aa35.85■■■■□ 3.33
TRAPPC3-208ENST00000616074 DISP1Q96F81 1524 aa35.8■■■■□ 3.32
TRAPPC3-208ENST00000616074 ABCC2Q92887 1545 aa35.77■■■■□ 3.32
TRAPPC3-208ENST00000616074 TSPOAP1O95153 1857 aa35.75■■■■□ 3.31
TRAPPC3-208ENST00000616074 UGGT2Q9NYU1 1516 aa35.73■■■■□ 3.31
TRAPPC3-208ENST00000616074 UHRF1BP1LA0JNW5 1464 aa35.7■■■■□ 3.31
TRAPPC3-208ENST00000616074 UACAQ9BZF9 1416 aa35.67■■■■□ 3.3
TRAPPC3-208ENST00000616074 KIAA0556O60303 1618 aa35.67■■■■□ 3.3
TRAPPC3-208ENST00000616074 KDM6BO15054 1643 aa35.65■■■■□ 3.3
TRAPPC3-208ENST00000616074 CTTNBP2Q8WZ74 1663 aa35.64■■■■□ 3.3
TRAPPC3-208ENST00000616074 ASXL2Q76L83 1435 aa35.64■■■■□ 3.3
TRAPPC3-208ENST00000616074 PLB1Q6P1J6 1458 aa35.6■■■■□ 3.29
TRAPPC3-208ENST00000616074 GLI2P10070 1586 aa35.56■■■■□ 3.28
TRAPPC3-208ENST00000616074 KDM5BQ9UGL1 1544 aa35.55■■■■□ 3.28
TRAPPC3-208ENST00000616074 PPRC1Q5VV67 1664 aaKnown RBP35.52■■■■□ 3.28
TRAPPC3-208ENST00000616074 ZCCHC11Q5TAX3 1644 aaKnown RBP35.52■■■■□ 3.28
TRAPPC3-208ENST00000616074 PRXQ9BXM0 1461 aa35.49■■■■□ 3.27
TRAPPC3-208ENST00000616074 EPRSP07814 1512 aaKnown RBP35.44■■■■□ 3.26
TRAPPC3-208ENST00000616074 GOLGA3Q08378 1498 aa35.41■■■■□ 3.26
TRAPPC3-208ENST00000616074 MAP3K4Q9Y6R4 1608 aa35.39■■■■□ 3.26
TRAPPC3-208ENST00000616074 ABCA8O94911 1581 aa35.33■■■■□ 3.25
TRAPPC3-208ENST00000616074 WDR7Q9Y4E6 1490 aa35.29■■■■□ 3.24
TRAPPC3-208ENST00000616074 KDM4FA0A1W2PPD8 638 aa35.24■■■■□ 3.23
TRAPPC3-208ENST00000616074 TEX14Q8IWB6 1497 aa35.23■■■■□ 3.23
TRAPPC3-208ENST00000616074 COL17A1Q9UMD9 1497 aaPredicted RBP35.22■■■■□ 3.23
TRAPPC3-208ENST00000616074 CSRNP3Q8WYN3 585 aa35.17■■■■□ 3.22
TRAPPC3-208ENST00000616074 CFAP43Q8NDM7 1665 aa35.13■■■■□ 3.21
TRAPPC3-208ENST00000616074 P3H3Q8IVL6 736 aa35.11■■■■□ 3.21
TRAPPC3-208ENST00000616074 SAMD9Q5K651 1589 aa35.11■■■■□ 3.21
TRAPPC3-208ENST00000616074 KCNH8Q96L42 1107 aa35.08■■■■□ 3.21
TRAPPC3-208ENST00000616074 CD109Q6YHK3 1445 aa35.06■■■■□ 3.2
TRAPPC3-208ENST00000616074 MAGI3Q5TCQ9 1506 aa35.05■■■■□ 3.2
TRAPPC3-208ENST00000616074 EEA1Q15075 1411 aa35.05■■■■□ 3.2
TRAPPC3-208ENST00000616074 ARID3CA6NKF2 412 aa35.01■■■■□ 3.2
TRAPPC3-208ENST00000616074 ATP10BO94823 1461 aa35■■■■□ 3.19
TRAPPC3-208ENST00000616074 ADGRL1O94910 1474 aa35■■■■□ 3.19
TRAPPC3-208ENST00000616074 FAM9AQ8IZU1 332 aaPredicted RBP34.99■■■■□ 3.19
TRAPPC3-208ENST00000616074 RAPGEF6Q8TEU7 1601 aa34.96■■■■□ 3.19
TRAPPC3-208ENST00000616074 ABCA9Q8IUA7 1624 aa34.86■■■■□ 3.17
TRAPPC3-208ENST00000616074 RANGAP1P46060 587 aaPredicted RBP34.86■■■■□ 3.17
TRAPPC3-208ENST00000616074 FHOD3Q2V2M9 1422 aa34.84■■■■□ 3.17
TRAPPC3-208ENST00000616074 KIF21BO75037 1637 aa34.84■■■■□ 3.17
TRAPPC3-208ENST00000616074 NUP153P49790 1475 aaKnown RBP34.81■■■■□ 3.16
TRAPPC3-208ENST00000616074 ARAP3Q8WWN8 1544 aa34.78■■■■□ 3.16
TRAPPC3-208ENST00000616074 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.75■■■■□ 3.15
TRAPPC3-208ENST00000616074 HNRNPUL2Q1KMD3 747 aaKnown RBP34.75■■■■□ 3.15
TRAPPC3-208ENST00000616074 EFCAB5A4FU69 1503 aa34.72■■■■□ 3.15
TRAPPC3-208ENST00000616074 PHLDB1Q86UU1 1377 aa34.65■■■■□ 3.14
TRAPPC3-208ENST00000616074 NEO1Q92859 1461 aa34.64■■■■□ 3.14
TRAPPC3-208ENST00000616074 FRMPD1Q5SYB0 1578 aa34.55■■■■□ 3.12
TRAPPC3-208ENST00000616074 PLEKHD1A6NEE1 506 aa34.55■■■■□ 3.12
TRAPPC3-208ENST00000616074 RAPGEF3O95398 923 aa34.55■■■■□ 3.12
TRAPPC3-208ENST00000616074 CHIC1Q5VXU3 224 aa34.54■■■■□ 3.12
TRAPPC3-208ENST00000616074 EHMT2Q96KQ7 1210 aa34.54■■■■□ 3.12
TRAPPC3-208ENST00000616074 HECW2Q9P2P5 1572 aa34.53■■■■□ 3.12
TRAPPC3-208ENST00000616074 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.5■■■■□ 3.11
TRAPPC3-208ENST00000616074 UBTFP17480 764 aaKnown RBP34.49■■■■□ 3.11
TRAPPC3-208ENST00000616074 CDK13Q14004 1512 aaKnown RBP34.49■■■■□ 3.11
TRAPPC3-208ENST00000616074 TTC37Q6PGP7 1564 aa34.48■■■■□ 3.11
TRAPPC3-208ENST00000616074 CFAP74Q9C0B2 1584 aa34.44■■■■□ 3.1
TRAPPC3-208ENST00000616074 RICTORQ6R327 1708 aa34.42■■■■□ 3.1
TRAPPC3-208ENST00000616074 ARHGAP35Q9NRY4 1499 aa34.42■■■■□ 3.1
TRAPPC3-208ENST00000616074 FANCAO15360 1455 aa34.41■■■■□ 3.1
TRAPPC3-208ENST00000616074 ADAMTSL3P82987 1691 aa34.41■■■■□ 3.1
TRAPPC3-208ENST00000616074 AKNAQ7Z591 1439 aa34.4■■■■□ 3.1
TRAPPC3-208ENST00000616074 HECW1Q76N89 1606 aa34.39■■■■□ 3.1
TRAPPC3-208ENST00000616074 DENND4BO75064 1496 aaPredicted RBP34.39■■■■□ 3.1
TRAPPC3-208ENST00000616074 FMN1Q68DA7 1419 aa34.38■■■■□ 3.09
TRAPPC3-208ENST00000616074 ARHGEF40Q8TER5 1519 aa34.35■■■■□ 3.09
TRAPPC3-208ENST00000616074 BCORL1Q5H9F3 1711 aa34.34■■■■□ 3.09
TRAPPC3-208ENST00000616074 ATP1B4Q9UN42 357 aaPredicted RBP34.3■■■■□ 3.08
TRAPPC3-208ENST00000616074 PTPRMP28827 1452 aa34.29■■■■□ 3.08
TRAPPC3-208ENST00000616074 ZMYM4Q5VZL5 1548 aa34.27■■■■□ 3.08
TRAPPC3-208ENST00000616074 MADDQ8WXG6 1647 aa34.26■■■■□ 3.08
TRAPPC3-208ENST00000616074 ARID4BQ4LE39 1312 aaPredicted RBP34.26■■■■□ 3.07
TRAPPC3-208ENST00000616074 PLCH2O75038 1416 aa34.25■■■■□ 3.07
TRAPPC3-208ENST00000616074 LRRIQ1Q96JM4 1722 aa34.24■■■■□ 3.07
TRAPPC3-208ENST00000616074 MYO5CQ9NQX4 1742 aa34.23■■■■□ 3.07
TRAPPC3-208ENST00000616074 KIF14Q15058 1648 aa34.21■■■■□ 3.07
TRAPPC3-208ENST00000616074 ZFYVE16Q7Z3T8 1539 aa34.2■■■■□ 3.06
TRAPPC3-208ENST00000616074 SIGLEC1Q9BZZ2 1709 aa34.17■■■■□ 3.06
TRAPPC3-208ENST00000616074 YEATS2Q9ULM3 1422 aa34.17■■■■□ 3.06
TRAPPC3-208ENST00000616074 SCAPERQ9BY12 1400 aa34.16■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms