RNA–Protein interactions for RNA: ENST00000616030.4

LINC00649-217, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 714 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-217ENST00000616030 ERCC6L2Q5T890 1561 aa17.96■□□□□ 0.46
LINC00649-217ENST00000616030 KIAA0586Q9BVV6 1533 aa17.92■□□□□ 0.46
LINC00649-217ENST00000616030 CARMIL1Q5VZK9 1371 aa17.9■□□□□ 0.46
LINC00649-217ENST00000616030 PRG4Q92954 1404 aaPredicted RBP17.86■□□□□ 0.45
LINC00649-217ENST00000616030 JPH4Q96JJ6 628 aa17.84■□□□□ 0.45
LINC00649-217ENST00000616030 RAPGEF2Q9Y4G8 1499 aa17.81■□□□□ 0.44
LINC00649-217ENST00000616030 IQGAP2Q13576 1575 aa17.79■□□□□ 0.44
LINC00649-217ENST00000616030 PRXQ9BXM0 1461 aa17.75■□□□□ 0.43
LINC00649-217ENST00000616030 UGGT2Q9NYU1 1516 aa17.72■□□□□ 0.43
LINC00649-217ENST00000616030 CTTNBP2Q8WZ74 1663 aa17.7■□□□□ 0.42
LINC00649-217ENST00000616030 ADCY10Q96PN6 1610 aa17.69■□□□□ 0.42
LINC00649-217ENST00000616030 DISP1Q96F81 1524 aa17.69■□□□□ 0.42
LINC00649-217ENST00000616030 EEA1Q15075 1411 aa17.68■□□□□ 0.42
LINC00649-217ENST00000616030 CARMIL2Q6F5E8 1435 aa17.67■□□□□ 0.42
LINC00649-217ENST00000616030 MAPKBP1O60336 1514 aa17.67■□□□□ 0.42
LINC00649-217ENST00000616030 TNIKQ9UKE5 1360 aa17.65■□□□□ 0.42
LINC00649-217ENST00000616030 KIAA0556O60303 1618 aa17.64■□□□□ 0.41
LINC00649-217ENST00000616030 UHRF1BP1LA0JNW5 1464 aa17.61■□□□□ 0.41
LINC00649-217ENST00000616030 TRHP20396 242 aaPredicted RBP17.6■□□□□ 0.41
LINC00649-217ENST00000616030 PTPRGP23470 1445 aa17.6■□□□□ 0.41
LINC00649-217ENST00000616030 KIF13AQ9H1H9 1805 aa17.6■□□□□ 0.41
LINC00649-217ENST00000616030 ABCC2Q92887 1545 aa17.56■□□□□ 0.4
LINC00649-217ENST00000616030 GOLGA3Q08378 1498 aa17.56■□□□□ 0.4
LINC00649-217ENST00000616030 ABCC10Q5T3U5 1492 aa17.56■□□□□ 0.4
LINC00649-217ENST00000616030 CSRNP3Q8WYN3 585 aa17.55■□□□□ 0.4
LINC00649-217ENST00000616030 DIP2BQ9P265 1576 aa17.54■□□□□ 0.4
LINC00649-217ENST00000616030 KIF21BO75037 1637 aa17.53■□□□□ 0.4
LINC00649-217ENST00000616030 UACAQ9BZF9 1416 aa17.53■□□□□ 0.4
LINC00649-217ENST00000616030 KDM5BQ9UGL1 1544 aa17.51■□□□□ 0.39
LINC00649-217ENST00000616030 SAMD9Q5K651 1589 aa17.49■□□□□ 0.39
LINC00649-217ENST00000616030 NPM1P06748 294 aaKnown RBP eCLIP17.47■□□□□ 0.39
LINC00649-217ENST00000616030 ABCA8O94911 1581 aa17.47■□□□□ 0.39
LINC00649-217ENST00000616030 PLB1Q6P1J6 1458 aa17.44■□□□□ 0.38
LINC00649-217ENST00000616030 GLI2P10070 1586 aa17.44■□□□□ 0.38
LINC00649-217ENST00000616030 ZCCHC11Q5TAX3 1644 aaKnown RBP17.43■□□□□ 0.38
LINC00649-217ENST00000616030 ASXL2Q76L83 1435 aa17.41■□□□□ 0.38
LINC00649-217ENST00000616030 FAM69CQ0P6D2 419 aa17.37■□□□□ 0.37
LINC00649-217ENST00000616030 EFCAB5A4FU69 1503 aa17.37■□□□□ 0.37
LINC00649-217ENST00000616030 EPRSP07814 1512 aaKnown RBP17.35■□□□□ 0.37
LINC00649-217ENST00000616030 PPRC1Q5VV67 1664 aaKnown RBP17.35■□□□□ 0.37
LINC00649-217ENST00000616030 WDR7Q9Y4E6 1490 aa17.34■□□□□ 0.37
LINC00649-217ENST00000616030 MAP3K4Q9Y6R4 1608 aa17.34■□□□□ 0.37
LINC00649-217ENST00000616030 RAPGEF6Q8TEU7 1601 aa17.31■□□□□ 0.36
LINC00649-217ENST00000616030 TTBK1Q5TCY1 1321 aaPredicted RBP17.3■□□□□ 0.36
LINC00649-217ENST00000616030 TSPOAP1O95153 1857 aa17.27■□□□□ 0.35
LINC00649-217ENST00000616030 FAM9AQ8IZU1 332 aaPredicted RBP17.26■□□□□ 0.35
LINC00649-217ENST00000616030 CFAP43Q8NDM7 1665 aa17.26■□□□□ 0.35
LINC00649-217ENST00000616030 KDM6BO15054 1643 aa17.25■□□□□ 0.35
LINC00649-217ENST00000616030 ATP10BO94823 1461 aa17.25■□□□□ 0.35
LINC00649-217ENST00000616030 NUP153P49790 1475 aaKnown RBP17.24■□□□□ 0.35
LINC00649-217ENST00000616030 FHOD3Q2V2M9 1422 aa17.24■□□□□ 0.35
LINC00649-217ENST00000616030 TEX14Q8IWB6 1497 aa17.22■□□□□ 0.35
LINC00649-217ENST00000616030 MAGI3Q5TCQ9 1506 aa17.21■□□□□ 0.35
LINC00649-217ENST00000616030 ARHGAP35Q9NRY4 1499 aa17.19■□□□□ 0.34
LINC00649-217ENST00000616030 ABCA9Q8IUA7 1624 aa17.19■□□□□ 0.34
LINC00649-217ENST00000616030 P3H3Q8IVL6 736 aa17.18■□□□□ 0.34
LINC00649-217ENST00000616030 FMN1Q68DA7 1419 aa17.15■□□□□ 0.34
LINC00649-217ENST00000616030 CD109Q6YHK3 1445 aa17.13■□□□□ 0.33
LINC00649-217ENST00000616030 COL17A1Q9UMD9 1497 aaPredicted RBP17.12■□□□□ 0.33
LINC00649-217ENST00000616030 HECW1Q76N89 1606 aa17.12■□□□□ 0.33
LINC00649-217ENST00000616030 UBTFP17480 764 aaKnown RBP17.12■□□□□ 0.33
LINC00649-217ENST00000616030 ARAP3Q8WWN8 1544 aa17.07■□□□□ 0.32
LINC00649-217ENST00000616030 PHLDB1Q86UU1 1377 aa17.06■□□□□ 0.32
LINC00649-217ENST00000616030 CDK13Q14004 1512 aaKnown RBP17.05■□□□□ 0.32
LINC00649-217ENST00000616030 NEO1Q92859 1461 aa17.05■□□□□ 0.32
LINC00649-217ENST00000616030 RANGAP1P46060 587 aaPredicted RBP17.04■□□□□ 0.32
LINC00649-217ENST00000616030 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.03■□□□□ 0.32
LINC00649-217ENST00000616030 KCNH8Q96L42 1107 aa17.03■□□□□ 0.32
LINC00649-217ENST00000616030 LRRIQ1Q96JM4 1722 aa17.02■□□□□ 0.32
LINC00649-217ENST00000616030 ARID3CA6NKF2 412 aa17■□□□□ 0.31
LINC00649-217ENST00000616030 PCF11O94913 1555 aaKnown RBP17■□□□□ 0.31
LINC00649-217ENST00000616030 TTC37Q6PGP7 1564 aa17■□□□□ 0.31
LINC00649-217ENST00000616030 CASKIN1Q8WXD9 1431 aa17■□□□□ 0.31
LINC00649-217ENST00000616030 CFAP74Q9C0B2 1584 aa17■□□□□ 0.31
LINC00649-217ENST00000616030 PLEKHD1A6NEE1 506 aa16.99■□□□□ 0.31
LINC00649-217ENST00000616030 FYCO1Q9BQS8 1478 aa16.99■□□□□ 0.31
LINC00649-217ENST00000616030 CCDC18Q5T9S5 1454 aa16.98■□□□□ 0.31
LINC00649-217ENST00000616030 CLIP1P30622 1438 aa16.97■□□□□ 0.31
LINC00649-217ENST00000616030 FRMPD1Q5SYB0 1578 aa16.96■□□□□ 0.31
LINC00649-217ENST00000616030 EHMT2Q96KQ7 1210 aa16.95■□□□□ 0.3
LINC00649-217ENST00000616030 TROQ12816 1431 aaPredicted RBP16.95■□□□□ 0.3
LINC00649-217ENST00000616030 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.94■□□□□ 0.3
LINC00649-217ENST00000616030 HNRNPUL2Q1KMD3 747 aaKnown RBP16.94■□□□□ 0.3
LINC00649-217ENST00000616030 KIF14Q15058 1648 aa16.94■□□□□ 0.3
LINC00649-217ENST00000616030 RICTORQ6R327 1708 aa16.92■□□□□ 0.3
LINC00649-217ENST00000616030 FANCAO15360 1455 aa16.92■□□□□ 0.3
LINC00649-217ENST00000616030 MYO5CQ9NQX4 1742 aa16.91■□□□□ 0.3
LINC00649-217ENST00000616030 PLCH2O75038 1416 aa16.91■□□□□ 0.3
LINC00649-217ENST00000616030 CDK11AQ9UQ88 783 aaPredicted RBP16.9■□□□□ 0.3
LINC00649-217ENST00000616030 ZMYM4Q5VZL5 1548 aa16.9■□□□□ 0.3
LINC00649-217ENST00000616030 AKNAQ7Z591 1439 aa16.88■□□□□ 0.29
LINC00649-217ENST00000616030 KDM4FA0A1W2PPD8 638 aa16.88■□□□□ 0.29
LINC00649-217ENST00000616030 CEP162Q5TB80 1403 aa16.87■□□□□ 0.29
LINC00649-217ENST00000616030 ADGRL1O94910 1474 aa16.86■□□□□ 0.29
LINC00649-217ENST00000616030 DENND4BO75064 1496 aaPredicted RBP16.86■□□□□ 0.29
LINC00649-217ENST00000616030 ARHGEF40Q8TER5 1519 aa16.86■□□□□ 0.29
LINC00649-217ENST00000616030 PREX2Q70Z35 1606 aa16.84■□□□□ 0.29
LINC00649-217ENST00000616030 CDC42BPBQ9Y5S2 1711 aa16.82■□□□□ 0.28
LINC00649-217ENST00000616030 MAGI2Q86UL8 1455 aa16.82■□□□□ 0.28
LINC00649-217ENST00000616030 POGZQ7Z3K3 1410 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms