RNA–Protein interactions for RNA: ENST00000616010.4

CCND3-223, Transcript of cyclin D3, humanhuman

TSL 5 BASIC

Gene CCND3, Length 2,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-223ENST00000616010 FBLN2P98095 1184 aa37.48■■■■□ 3.59
CCND3-223ENST00000616010 CLIP1P30622 1438 aa37.48■■■■□ 3.59
CCND3-223ENST00000616010 CHD1O14646 1710 aa37.42■■■■□ 3.58
CCND3-223ENST00000616010 CEP170Q5SW79 1584 aa37.37■■■■□ 3.57
CCND3-223ENST00000616010 IQGAP2Q13576 1575 aa37.33■■■■□ 3.57
CCND3-223ENST00000616010 NUP160Q12769 1436 aa37.31■■■■□ 3.56
CCND3-223ENST00000616010 KIAA0586Q9BVV6 1533 aa37.28■■■■□ 3.56
CCND3-223ENST00000616010 ARHGAP35Q9NRY4 1499 aa37.27■■■■□ 3.56
CCND3-223ENST00000616010 EFCAB5A4FU69 1503 aa37.2■■■■□ 3.55
CCND3-223ENST00000616010 ARAP1Q96P48 1450 aa37.19■■■■□ 3.54
CCND3-223ENST00000616010 SAMD9Q5K651 1589 aa37.15■■■■□ 3.54
CCND3-223ENST00000616010 UGGT2Q9NYU1 1516 aa37.11■■■■□ 3.53
CCND3-223ENST00000616010 VPS8Q8N3P4 1428 aa37.07■■■■□ 3.53
CCND3-223ENST00000616010 P3H3Q8IVL6 736 aa37.05■■■■□ 3.52
CCND3-223ENST00000616010 FHOD3Q2V2M9 1422 aa37.04■■■■□ 3.52
CCND3-223ENST00000616010 KIAA0556O60303 1618 aa36.97■■■■□ 3.51
CCND3-223ENST00000616010 CLASP1Q7Z460 1538 aa36.96■■■■□ 3.51
CCND3-223ENST00000616010 DISP1Q96F81 1524 aa36.96■■■■□ 3.51
CCND3-223ENST00000616010 JPH4Q96JJ6 628 aa36.94■■■■□ 3.5
CCND3-223ENST00000616010 SHROOM2Q13796 1616 aa36.89■■■■□ 3.5
CCND3-223ENST00000616010 FMN1Q68DA7 1419 aa36.83■■■■□ 3.49
CCND3-223ENST00000616010 CARMIL2Q6F5E8 1435 aa36.83■■■■□ 3.49
CCND3-223ENST00000616010 PCF11O94913 1555 aaKnown RBP36.81■■■■□ 3.48
CCND3-223ENST00000616010 PRG4Q92954 1404 aaPredicted RBP36.8■■■■□ 3.48
CCND3-223ENST00000616010 OSCARQ8IYS5 282 aa36.76■■■■□ 3.47
CCND3-223ENST00000616010 FYCO1Q9BQS8 1478 aa36.7■■■■□ 3.47
CCND3-223ENST00000616010 CASKIN1Q8WXD9 1431 aa36.69■■■■□ 3.46
CCND3-223ENST00000616010 TTBK1Q5TCY1 1321 aaPredicted RBP36.67■■■■□ 3.46
CCND3-223ENST00000616010 ERCC6L2Q5T890 1561 aa36.67■■■■□ 3.46
CCND3-223ENST00000616010 APLP2Q06481 763 aa36.64■■■■□ 3.46
CCND3-223ENST00000616010 PPARGC1BQ86YN6 1023 aaKnown RBP36.63■■■■□ 3.45
CCND3-223ENST00000616010 ATP1B4Q9UN42 357 aaPredicted RBP36.6■■■■□ 3.45
CCND3-223ENST00000616010 HECW1Q76N89 1606 aa36.56■■■■□ 3.44
CCND3-223ENST00000616010 RAPGEF6Q8TEU7 1601 aa36.54■■■■□ 3.44
CCND3-223ENST00000616010 TIAM1Q13009 1591 aa36.53■■■■□ 3.44
CCND3-223ENST00000616010 CFAP43Q8NDM7 1665 aa36.53■■■■□ 3.44
CCND3-223ENST00000616010 LRRIQ1Q96JM4 1722 aa36.53■■■■□ 3.44
CCND3-223ENST00000616010 PTPRGP23470 1445 aa36.5■■■■□ 3.43
CCND3-223ENST00000616010 PLB1Q6P1J6 1458 aa36.5■■■■□ 3.43
CCND3-223ENST00000616010 MAP3K1Q13233 1512 aa36.49■■■■□ 3.43
CCND3-223ENST00000616010 ABCA8O94911 1581 aa36.43■■■■□ 3.42
CCND3-223ENST00000616010 NUP153P49790 1475 aaKnown RBP36.41■■■■□ 3.42
CCND3-223ENST00000616010 CCDC18Q5T9S5 1454 aa36.41■■■■□ 3.42
CCND3-223ENST00000616010 KANK4Q5T7N3 995 aaPredicted RBP36.39■■■■□ 3.42
CCND3-223ENST00000616010 EPRSP07814 1512 aaKnown RBP36.39■■■■□ 3.42
CCND3-223ENST00000616010 CDK13Q14004 1512 aaKnown RBP36.35■■■■□ 3.41
CCND3-223ENST00000616010 LRRC9Q6ZRR7 1453 aa36.33■■■■□ 3.41
CCND3-223ENST00000616010 ARID3CA6NKF2 412 aa36.33■■■■□ 3.41
CCND3-223ENST00000616010 UACAQ9BZF9 1416 aa36.3■■■■□ 3.4
CCND3-223ENST00000616010 ABCC2Q92887 1545 aa36.24■■■■□ 3.39
CCND3-223ENST00000616010 ARHGEF11O15085 1522 aa36.23■■■■□ 3.39
CCND3-223ENST00000616010 MTUS2Q5JR59 1369 aa36.2■■■■□ 3.39
CCND3-223ENST00000616010 MAGI3Q5TCQ9 1506 aa36.2■■■■□ 3.38
CCND3-223ENST00000616010 EHBP1L1Q8N3D4 1523 aa36.19■■■■□ 3.38
CCND3-223ENST00000616010 TRIM26Q12899 539 aaPredicted RBP36.17■■■■□ 3.38
CCND3-223ENST00000616010 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.17■■■■□ 3.38
CCND3-223ENST00000616010 HNRNPUL2Q1KMD3 747 aaKnown RBP36.17■■■■□ 3.38
CCND3-223ENST00000616010 UHRF1BP1LA0JNW5 1464 aa36.14■■■■□ 3.38
CCND3-223ENST00000616010 ATP10BO94823 1461 aa36.14■■■■□ 3.38
CCND3-223ENST00000616010 RIMBP3CA6NJZ7 1639 aa36.1■■■■□ 3.37
CCND3-223ENST00000616010 RIMBP3BA6NNM3 1639 aa36.1■■■■□ 3.37
CCND3-223ENST00000616010 RIMBP3Q9UFD9 1639 aa36.1■■■■□ 3.37
CCND3-223ENST00000616010 ADCY10Q96PN6 1610 aa36.1■■■■□ 3.37
CCND3-223ENST00000616010 SUPT6HQ7KZ85 1726 aaKnown RBP36.07■■■■□ 3.36
CCND3-223ENST00000616010 CDK11AQ9UQ88 783 aaPredicted RBP36.05■■■■□ 3.36
CCND3-223ENST00000616010 PCGF6Q9BYE7 350 aa36.05■■■■□ 3.36
CCND3-223ENST00000616010 ZCCHC11Q5TAX3 1644 aaKnown RBP36.02■■■■□ 3.36
CCND3-223ENST00000616010 KDM5BQ9UGL1 1544 aa36.01■■■■□ 3.35
CCND3-223ENST00000616010 NCOA2Q15596 1464 aa35.99■■■■□ 3.35
CCND3-223ENST00000616010 TROQ12816 1431 aaPredicted RBP35.99■■■■□ 3.35
CCND3-223ENST00000616010 PHLDB1Q86UU1 1377 aa35.98■■■■□ 3.35
CCND3-223ENST00000616010 PLEKHD1A6NEE1 506 aa35.92■■■■□ 3.34
CCND3-223ENST00000616010 KIF14Q15058 1648 aa35.89■■■■□ 3.34
CCND3-223ENST00000616010 RRBP1Q9P2E9 1410 aaKnown RBP35.87■■■■□ 3.33
CCND3-223ENST00000616010 CYB5RLQ6IPT4 315 aa35.83■■■■□ 3.33
CCND3-223ENST00000616010 MYOM3Q5VTT5 1437 aa35.81■■■■□ 3.32
CCND3-223ENST00000616010 CCNB3Q8WWL7 1395 aa35.8■■■■□ 3.32
CCND3-223ENST00000616010 FGD6Q6ZV73 1430 aa35.76■■■■□ 3.32
CCND3-223ENST00000616010 NPM1P06748 294 aaKnown RBP eCLIP35.73■■■■□ 3.31
CCND3-223ENST00000616010 ABCC10Q5T3U5 1492 aa35.71■■■■□ 3.31
CCND3-223ENST00000616010 WDR7Q9Y4E6 1490 aa35.7■■■■□ 3.31
CCND3-223ENST00000616010 ITSN2Q9NZM3 1697 aa35.69■■■■□ 3.3
CCND3-223ENST00000616010 ASXL2Q76L83 1435 aa35.68■■■■□ 3.3
CCND3-223ENST00000616010 TTC37Q6PGP7 1564 aa35.65■■■■□ 3.3
CCND3-223ENST00000616010 PTPN23Q9H3S7 1636 aa35.64■■■■□ 3.3
CCND3-223ENST00000616010 CDC42BPAQ5VT25 1732 aa35.64■■■■□ 3.3
CCND3-223ENST00000616010 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.64■■■■□ 3.34e-7■■□□□ 12.9
CCND3-223ENST00000616010 KCNH8Q96L42 1107 aa35.64■■■■□ 3.3
CCND3-223ENST00000616010 GPATCH8Q9UKJ3 1502 aaKnown RBP35.63■■■■□ 3.29
CCND3-223ENST00000616010 FAM50AQ14320 339 aaKnown RBP35.63■■■■□ 3.29
CCND3-223ENST00000616010 MIA2Q96PC5 1412 aa35.62■■■■□ 3.29
CCND3-223ENST00000616010 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.56■■■■□ 3.283e-7■□□□□ 10.7
CCND3-223ENST00000616010 TCOF1Q13428 1488 aaKnown RBP35.56■■■■□ 3.28
CCND3-223ENST00000616010 PREX2Q70Z35 1606 aa35.55■■■■□ 3.28
CCND3-223ENST00000616010 MAPKBP1O60336 1514 aa35.54■■■■□ 3.28
CCND3-223ENST00000616010 MYO5CQ9NQX4 1742 aa35.53■■■■□ 3.28
CCND3-223ENST00000616010 CFDP1Q9UEE9 299 aaPredicted RBP35.52■■■■□ 3.28
CCND3-223ENST00000616010 CDC42BPBQ9Y5S2 1711 aa35.49■■■■□ 3.27
CCND3-223ENST00000616010 ITGAEP38570 1179 aa35.49■■■■□ 3.27
CCND3-223ENST00000616010 ABCA9Q8IUA7 1624 aa35.47■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms