RNA–Protein interactions for RNA: ENST00000615317.4

MMP28-205, Transcript of matrix metallopeptidase 28, humanhuman

TSL 2

Gene MMP28, Length 436 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-205ENST00000615317 IQGAP2Q13576 1575 aa14.98□□□□□ -0.01
MMP28-205ENST00000615317 SHROOM2Q13796 1616 aa14.94□□□□□ -0.02
MMP28-205ENST00000615317 KIAA0586Q9BVV6 1533 aa14.91□□□□□ -0.02
MMP28-205ENST00000615317 KIAA0556O60303 1618 aa14.87□□□□□ -0.03
MMP28-205ENST00000615317 SAMD9Q5K651 1589 aa14.86□□□□□ -0.03
MMP28-205ENST00000615317 UGGT2Q9NYU1 1516 aa14.86□□□□□ -0.03
MMP28-205ENST00000615317 UBTFP17480 764 aaKnown RBP14.85□□□□□ -0.03
MMP28-205ENST00000615317 ERCC6L2Q5T890 1561 aa14.85□□□□□ -0.03
MMP28-205ENST00000615317 TNIKQ9UKE5 1360 aa14.83□□□□□ -0.04
MMP28-205ENST00000615317 EFCAB5A4FU69 1503 aa14.82□□□□□ -0.04
MMP28-205ENST00000615317 LOC105371045A0A1W2PR82 267 aa14.82□□□□□ -0.04
MMP28-205ENST00000615317 OSCARQ8IYS5 282 aa14.82□□□□□ -0.04
MMP28-205ENST00000615317 CEP162Q5TB80 1403 aa14.8□□□□□ -0.04
MMP28-205ENST00000615317 DISP1Q96F81 1524 aa14.8□□□□□ -0.04
MMP28-205ENST00000615317 RIMBP3CA6NJZ7 1639 aa14.8□□□□□ -0.04
MMP28-205ENST00000615317 RIMBP3BA6NNM3 1639 aa14.8□□□□□ -0.04
MMP28-205ENST00000615317 RIMBP3Q9UFD9 1639 aa14.8□□□□□ -0.04
MMP28-205ENST00000615317 ARHGEF11O15085 1522 aa14.78□□□□□ -0.04
MMP28-205ENST00000615317 RANGAP1P46060 587 aaPredicted RBP14.78□□□□□ -0.04
MMP28-205ENST00000615317 PRG4Q92954 1404 aaPredicted RBP14.77□□□□□ -0.04
MMP28-205ENST00000615317 ARHGAP35Q9NRY4 1499 aa14.76□□□□□ -0.05
MMP28-205ENST00000615317 CLIP1P30622 1438 aa14.76□□□□□ -0.05
MMP28-205ENST00000615317 FHOD3Q2V2M9 1422 aa14.74□□□□□ -0.05
MMP28-205ENST00000615317 ARAP1Q96P48 1450 aa14.73□□□□□ -0.05
MMP28-205ENST00000615317 CARMIL2Q6F5E8 1435 aa14.72□□□□□ -0.05
MMP28-205ENST00000615317 JPH4Q96JJ6 628 aa14.71□□□□□ -0.05
MMP28-205ENST00000615317 PCF11O94913 1555 aaKnown RBP14.7□□□□□ -0.06
MMP28-205ENST00000615317 RAPGEF6Q8TEU7 1601 aa14.66□□□□□ -0.06
MMP28-205ENST00000615317 P3H3Q8IVL6 736 aa14.65□□□□□ -0.06
MMP28-205ENST00000615317 LRRIQ1Q96JM4 1722 aa14.65□□□□□ -0.06
MMP28-205ENST00000615317 TTBK1Q5TCY1 1321 aaPredicted RBP14.64□□□□□ -0.07
MMP28-205ENST00000615317 HECW1Q76N89 1606 aa14.63□□□□□ -0.07
MMP28-205ENST00000615317 ABCA8O94911 1581 aa14.63□□□□□ -0.07
MMP28-205ENST00000615317 ADCY10Q96PN6 1610 aa14.63□□□□□ -0.07
MMP28-205ENST00000615317 PLB1Q6P1J6 1458 aa14.61□□□□□ -0.07
MMP28-205ENST00000615317 ABCC2Q92887 1545 aa14.6□□□□□ -0.07
MMP28-205ENST00000615317 FMN1Q68DA7 1419 aa14.59□□□□□ -0.07
MMP28-205ENST00000615317 CFAP43Q8NDM7 1665 aa14.59□□□□□ -0.07
MMP28-205ENST00000615317 PTPRGP23470 1445 aa14.58□□□□□ -0.07
MMP28-205ENST00000615317 VPS8Q8N3P4 1428 aa14.58□□□□□ -0.07
MMP28-205ENST00000615317 FYCO1Q9BQS8 1478 aa14.57□□□□□ -0.08
MMP28-205ENST00000615317 ZCCHC11Q5TAX3 1644 aaKnown RBP14.56□□□□□ -0.08
MMP28-205ENST00000615317 NUP153P49790 1475 aaKnown RBP14.55□□□□□ -0.08
MMP28-205ENST00000615317 UACAQ9BZF9 1416 aa14.54□□□□□ -0.08
MMP28-205ENST00000615317 CDK13Q14004 1512 aaKnown RBP14.53□□□□□ -0.08
MMP28-205ENST00000615317 CASKIN1Q8WXD9 1431 aa14.53□□□□□ -0.08
MMP28-205ENST00000615317 DNAJC5Q9H3Z4 198 aa14.53□□□□□ -0.08
MMP28-205ENST00000615317 UHRF1BP1LA0JNW5 1464 aa14.52□□□□□ -0.08
MMP28-205ENST00000615317 TIAM1Q13009 1591 aa14.49□□□□□ -0.09
MMP28-205ENST00000615317 CCDC18Q5T9S5 1454 aa14.49□□□□□ -0.09
MMP28-205ENST00000615317 EPRSP07814 1512 aaKnown RBP14.48□□□□□ -0.09
MMP28-205ENST00000615317 KDM5BQ9UGL1 1544 aa14.46□□□□□ -0.09
MMP28-205ENST00000615317 ARID3CA6NKF2 412 aa14.46□□□□□ -0.09
MMP28-205ENST00000615317 CYB5RLQ6IPT4 315 aa14.46□□□□□ -0.09
MMP28-205ENST00000615317 ATP1B4Q9UN42 357 aaPredicted RBP14.43□□□□□ -0.1
MMP28-205ENST00000615317 MAGI3Q5TCQ9 1506 aa14.42□□□□□ -0.1
MMP28-205ENST00000615317 ATP10BO94823 1461 aa14.42□□□□□ -0.1
MMP28-205ENST00000615317 MAPKBP1O60336 1514 aa14.41□□□□□ -0.1
MMP28-205ENST00000615317 EHBP1L1Q8N3D4 1523 aa14.41□□□□□ -0.1
MMP28-205ENST00000615317 KIF14Q15058 1648 aa14.4□□□□□ -0.1
MMP28-205ENST00000615317 MAP3K1Q13233 1512 aa14.38□□□□□ -0.11
MMP28-205ENST00000615317 WDR7Q9Y4E6 1490 aa14.38□□□□□ -0.11
MMP28-205ENST00000615317 SUPT6HQ7KZ85 1726 aaKnown RBP14.37□□□□□ -0.11
MMP28-205ENST00000615317 DIP2BQ9P265 1576 aa14.36□□□□□ -0.11
MMP28-205ENST00000615317 ASXL2Q76L83 1435 aa14.36□□□□□ -0.11
MMP28-205ENST00000615317 KIF13AQ9H1H9 1805 aa14.36□□□□□ -0.11
MMP28-205ENST00000615317 TTC37Q6PGP7 1564 aa14.35□□□□□ -0.11
MMP28-205ENST00000615317 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.35□□□□□ -0.11
MMP28-205ENST00000615317 HNRNPUL2Q1KMD3 747 aaKnown RBP14.35□□□□□ -0.11
MMP28-205ENST00000615317 LRRC9Q6ZRR7 1453 aa14.34□□□□□ -0.11
MMP28-205ENST00000615317 TROQ12816 1431 aaPredicted RBP14.32□□□□□ -0.12
MMP28-205ENST00000615317 MYO5CQ9NQX4 1742 aa14.32□□□□□ -0.12
MMP28-205ENST00000615317 ITSN2Q9NZM3 1697 aa14.31□□□□□ -0.12
MMP28-205ENST00000615317 MTUS2Q5JR59 1369 aa14.31□□□□□ -0.12
MMP28-205ENST00000615317 ABCA9Q8IUA7 1624 aa14.3□□□□□ -0.12
MMP28-205ENST00000615317 CDC42BPAQ5VT25 1732 aa14.3□□□□□ -0.12
MMP28-205ENST00000615317 NPM1P06748 294 aaKnown RBP eCLIP14.3□□□□□ -0.12
MMP28-205ENST00000615317 APLP2Q06481 763 aa14.29□□□□□ -0.12
MMP28-205ENST00000615317 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.29□□□□□ -0.12
MMP28-205ENST00000615317 PREX2Q70Z35 1606 aa14.29□□□□□ -0.12
MMP28-205ENST00000615317 MAP3K4Q9Y6R4 1608 aa14.29□□□□□ -0.12
MMP28-205ENST00000615317 TSPOAP1O95153 1857 aa14.27□□□□□ -0.13
MMP28-205ENST00000615317 NCOA2Q15596 1464 aa14.26□□□□□ -0.13
MMP28-205ENST00000615317 GLI2P10070 1586 aa14.26□□□□□ -0.13
MMP28-205ENST00000615317 ABCC10Q5T3U5 1492 aa14.25□□□□□ -0.13
MMP28-205ENST00000615317 KANK4Q5T7N3 995 aaPredicted RBP14.25□□□□□ -0.13
MMP28-205ENST00000615317 CDC42BPBQ9Y5S2 1711 aa14.24□□□□□ -0.13
MMP28-205ENST00000615317 PPRC1Q5VV67 1664 aaKnown RBP14.24□□□□□ -0.13
MMP28-205ENST00000615317 CDK11AQ9UQ88 783 aaPredicted RBP14.24□□□□□ -0.13
MMP28-205ENST00000615317 PLEKHD1A6NEE1 506 aa14.22□□□□□ -0.13
MMP28-205ENST00000615317 PPARGC1BQ86YN6 1023 aaKnown RBP14.22□□□□□ -0.13
MMP28-205ENST00000615317 CFAP74Q9C0B2 1584 aa14.2□□□□□ -0.14
MMP28-205ENST00000615317 KCNH8Q96L42 1107 aa14.19□□□□□ -0.14
MMP28-205ENST00000615317 ARHGAP5Q13017 1502 aa14.19□□□□□ -0.14
MMP28-205ENST00000615317 PHLDB1Q86UU1 1377 aa14.17□□□□□ -0.14
MMP28-205ENST00000615317 SAMD9LQ8IVG5 1584 aa14.17□□□□□ -0.14
MMP28-205ENST00000615317 ARAP3Q8WWN8 1544 aa14.16□□□□□ -0.14
MMP28-205ENST00000615317 MYOM3Q5VTT5 1437 aa14.15□□□□□ -0.14
MMP28-205ENST00000615317 GPATCH8Q9UKJ3 1502 aaKnown RBP14.15□□□□□ -0.14
MMP28-205ENST00000615317 PTPN23Q9H3S7 1636 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms