RNA–Protein interactions for RNA: ENST00000615285.4

NCAM1-222, Transcript of neural cell adhesion molecule 1, human

TSL 5 BASIC

Gene NCAM1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAM1-222	ENST00000615285	CHIC2	Q9UKJ5	165 aa		13.16	□□□□□ -0.3
NCAM1-222	ENST00000615285	ZNF316	A6NFI3	1004 aa	Predicted RBP	13.14	□□□□□ -0.31
NCAM1-222	ENST00000615285	PLPPR3	Q6T4P5	718 aa		13.14	□□□□□ -0.31
NCAM1-222	ENST00000615285	ARID4B	Q4LE39	1312 aa	Predicted RBP	13.13	□□□□□ -0.31
NCAM1-222	ENST00000615285	CLSPN	Q9HAW4	1339 aa		13.13	□□□□□ -0.31
NCAM1-222	ENST00000615285	PPP1R15A	O75807	674 aa	Predicted RBP	13.12	□□□□□ -0.31
NCAM1-222	ENST00000615285	CCNB3	Q8WWL7	1395 aa		13.11	□□□□□ -0.31
NCAM1-222	ENST00000615285	WIZ	O95785	1651 aa		13.1	□□□□□ -0.31
NCAM1-222	ENST00000615285	SLC24A1	O60721	1099 aa		13.09	□□□□□ -0.31
NCAM1-222	ENST00000615285	CANX	P27824	592 aa	Known RBP	13.08	□□□□□ -0.32
NCAM1-222	ENST00000615285	KANK1	Q14678	1352 aa		13.08	□□□□□ -0.32
NCAM1-222	ENST00000615285	FMN1	Q68DA7	1419 aa		13.06	□□□□□ -0.32
NCAM1-222	ENST00000615285	FANCD2	Q9BXW9	1451 aa		13.05	□□□□□ -0.32
NCAM1-222	ENST00000615285	HDGF	P51858	240 aa	Known RBP	13.04	□□□□□ -0.32
NCAM1-222	ENST00000615285	TRH	P20396	242 aa	Predicted RBP	13.03	□□□□□ -0.32
NCAM1-222	ENST00000615285	CDCA8	Q53HL2	280 aa		13.02	□□□□□ -0.33
NCAM1-222	ENST00000615285	NCAPD3	P42695	1498 aa		13.02	□□□□□ -0.33
NCAM1-222	ENST00000615285	RRP7BP	Q9NSQ0	103 aa		13.01	□□□□□ -0.33
NCAM1-222	ENST00000615285	RAPGEF2	Q9Y4G8	1499 aa		13	□□□□□ -0.33
NCAM1-222	ENST00000615285	TDRD9	Q8NDG6	1382 aa	Known RBP	13	□□□□□ -0.33
NCAM1-222	ENST00000615285	GTF3C3	Q9Y5Q9	886 aa		12.98	□□□□□ -0.33
NCAM1-222	ENST00000615285	C14orf37	Q86TY3	774 aa		12.97	□□□□□ -0.33
NCAM1-222	ENST00000615285	KDM2A	Q9Y2K7	1162 aa		12.95	□□□□□ -0.34
NCAM1-222	ENST00000615285	ARHGAP35	Q9NRY4	1499 aa		12.95	□□□□□ -0.34
NCAM1-222	ENST00000615285	RTL5	Q5HYW3	569 aa	Predicted RBP	12.94	□□□□□ -0.34
NCAM1-222	ENST00000615285	EFCAB2	Q5VUJ9	269 aa		12.94	□□□□□ -0.34
NCAM1-222	ENST00000615285	EIF4G2	P78344	907 aa	Known RBP eCLIP	12.93	□□□□□ -0.34
NCAM1-222	ENST00000615285	VPS8	Q8N3P4	1428 aa		12.92	□□□□□ -0.34
NCAM1-222	ENST00000615285	WDR43	Q15061	677 aa	Known RBP eCLIP	12.91	□□□□□ -0.34
NCAM1-222	ENST00000615285	RSPH4A	Q5TD94	716 aa		12.91	□□□□□ -0.34
NCAM1-222	ENST00000615285	BCL11A	Q9H165	835 aa		12.89	□□□□□ -0.35
NCAM1-222	ENST00000615285	CCDC18	Q5T9S5	1454 aa		12.89	□□□□□ -0.35
NCAM1-222	ENST00000615285	OSCAR	Q8IYS5	282 aa		12.89	□□□□□ -0.35
NCAM1-222	ENST00000615285	SCAF1	Q9H7N4	1312 aa	Known RBP	12.88	□□□□□ -0.35
NCAM1-222	ENST00000615285	HMGXB3	Q12766	1538 aa		12.88	□□□□□ -0.35
NCAM1-222	ENST00000615285	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	12.86	□□□□□ -0.35
NCAM1-222	ENST00000615285	TMC1	Q8TDI8	760 aa		12.86	□□□□□ -0.35
NCAM1-222	ENST00000615285	HAP1	P54257	671 aa	Predicted RBP	12.86	□□□□□ -0.35
NCAM1-222	ENST00000615285	JPH4	Q96JJ6	628 aa		12.85	□□□□□ -0.35
NCAM1-222	ENST00000615285	CFAP53	Q96M91	514 aa		12.85	□□□□□ -0.35
NCAM1-222	ENST00000615285	NPM2	Q86SE8	214 aa	Known RBP	12.85	□□□□□ -0.35
NCAM1-222	ENST00000615285	GAPVD1	Q14C86	1478 aa		12.84	□□□□□ -0.35
NCAM1-222	ENST00000615285	ANKRD30A	Q9BXX3	1397 aa		12.84	□□□□□ -0.35
NCAM1-222	ENST00000615285	POGK	Q9P215	609 aa		12.83	□□□□□ -0.36
NCAM1-222	ENST00000615285	TIMELESS	Q9UNS1	1208 aa		12.82	□□□□□ -0.36
NCAM1-222	ENST00000615285	CC2D2A	Q9P2K1	1620 aa		12.81	□□□□□ -0.36
NCAM1-222	ENST00000615285	MRC2	Q9UBG0	1479 aa		12.81	□□□□□ -0.36
NCAM1-222	ENST00000615285	RGL3	Q3MIN7	710 aa		12.81	□□□□□ -0.36
NCAM1-222	ENST00000615285	FGD5	Q6ZNL6	1462 aa		12.81	□□□□□ -0.36
NCAM1-222	ENST00000615285	PTPRG	P23470	1445 aa		12.8	□□□□□ -0.36
NCAM1-222	ENST00000615285	CARD11	Q9BXL7	1154 aa		12.79	□□□□□ -0.36
NCAM1-222	ENST00000615285	DDX10	Q13206	875 aa	Known RBP	12.77	□□□□□ -0.36
NCAM1-222	ENST00000615285	KNSTRN	Q9Y448	316 aa		12.77	□□□□□ -0.36
NCAM1-222	ENST00000615285	IFT140	Q96RY7	1462 aa		12.77	□□□□□ -0.37
NCAM1-222	ENST00000615285	GRIN2B	Q13224	1484 aa		12.76	□□□□□ -0.37
NCAM1-222	ENST00000615285	SETD5	Q9C0A6	1442 aa		12.75	□□□□□ -0.37
NCAM1-222	ENST00000615285	PNN	Q9H307	717 aa	Known RBP	12.74	□□□□□ -0.37
NCAM1-222	ENST00000615285	CFTR	P13569	1480 aa		12.74	□□□□□ -0.37
NCAM1-222	ENST00000615285	MLEC	Q14165	292 aa		12.74	□□□□□ -0.37
NCAM1-222	ENST00000615285	SPAG9	O60271	1321 aa	Known RBP	12.74	□□□□□ -0.37
NCAM1-222	ENST00000615285	NUDC	Q9Y266	331 aa		12.73	□□□□□ -0.37
NCAM1-222	ENST00000615285	ZBTB7C	A1YPR0	619 aa		12.73	□□□□□ -0.37
NCAM1-222	ENST00000615285	GGT6	Q6P531	493 aa		12.73	□□□□□ -0.37
NCAM1-222	ENST00000615285	MRS2	Q9HD23	443 aa		12.73	□□□□□ -0.37
NCAM1-222	ENST00000615285	FHOD3	Q2V2M9	1422 aa		12.72	□□□□□ -0.37
NCAM1-222	ENST00000615285	FAM9B	Q8IZU0	186 aa		12.72	□□□□□ -0.37
NCAM1-222	ENST00000615285	HNRNPU	Q00839	825 aa	Known RBP eCLIP	12.72	□□□□□ -0.37
NCAM1-222	ENST00000615285	TMF1	P82094	1093 aa		12.71	□□□□□ -0.38
NCAM1-222	ENST00000615285	MYH16	Q9H6N6	1097 aa		12.7	□□□□□ -0.38
NCAM1-222	ENST00000615285	EID1	Q9Y6B2	187 aa		12.69	□□□□□ -0.38
NCAM1-222	ENST00000615285	UPF2	Q9HAU5	1272 aa	Known RBP	12.68	□□□□□ -0.38
NCAM1-222	ENST00000615285	EIF3A	Q14152	1382 aa	Known RBP	12.68	□□□□□ -0.38
NCAM1-222	ENST00000615285	LAMC3	Q9Y6N6	1575 aa		12.67	□□□□□ -0.38
NCAM1-222	ENST00000615285		A0A0G2JS52	829 aa		12.67	□□□□□ -0.38
NCAM1-222	ENST00000615285	MAPK8IP3	Q9UPT6	1336 aa		12.65	□□□□□ -0.38
NCAM1-222	ENST00000615285	NUP155	O75694	1391 aa		12.65	□□□□□ -0.38
NCAM1-222	ENST00000615285	UACA	Q9BZF9	1416 aa		12.65	□□□□□ -0.38
NCAM1-222	ENST00000615285	RAD54L2	Q9Y4B4	1467 aa		12.65	□□□□□ -0.38
NCAM1-222	ENST00000615285	DCAF11	Q8TEB1	546 aa		12.65	□□□□□ -0.38
NCAM1-222	ENST00000615285	IGF1R	P08069	1367 aa		12.64	□□□□□ -0.39
NCAM1-222	ENST00000615285	KIF3B	O15066	747 aa		12.64	□□□□□ -0.39
NCAM1-222	ENST00000615285	PKD2	Q13563	968 aa		12.64	□□□□□ -0.39
NCAM1-222	ENST00000615285	CYB5RL	Q6IPT4	315 aa		12.63	□□□□□ -0.39
NCAM1-222	ENST00000615285	CUX1	P39880	1505 aa		12.63	□□□□□ -0.39
NCAM1-222	ENST00000615285	WASHC2C	Q9Y4E1	1318 aa		12.63	□□□□□ -0.39
NCAM1-222	ENST00000615285	EIF5B	O60841	1220 aa	Known RBP	12.63	□□□□□ -0.39
NCAM1-222	ENST00000615285	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	12.62	□□□□□ -0.39
NCAM1-222	ENST00000615285	DNMBP	Q6XZF7	1577 aa		12.62	□□□□□ -0.39
NCAM1-222	ENST00000615285	LMOD2	Q6P5Q4	547 aa		12.62	□□□□□ -0.39
NCAM1-222	ENST00000615285	CHMP4B	Q9H444	224 aa	Known RBP	12.61	□□□□□ -0.39
NCAM1-222	ENST00000615285	ANP32A	P39687	249 aa	Known RBP	12.61	□□□□□ -0.39
NCAM1-222	ENST00000615285	AQR	O60306	1485 aa	Known RBP eCLIP	12.6	□□□□□ -0.39
NCAM1-222	ENST00000615285	SRPK2	P78362	688 aa	Known RBP	12.6	□□□□□ -0.39
NCAM1-222	ENST00000615285	ERICH3	Q5RHP9	1530 aa		12.6	□□□□□ -0.39
NCAM1-222	ENST00000615285	SENP3	Q9H4L4	574 aa	Predicted RBP	12.6	□□□□□ -0.39
NCAM1-222	ENST00000615285	HNRNPM	P52272	730 aa	Known RBP eCLIP	12.59	□□□□□ -0.39
NCAM1-222	ENST00000615285	TOPBP1	Q92547	1522 aa		12.59	□□□□□ -0.39
NCAM1-222	ENST00000615285	SYNJ2	O15056	1496 aa		12.57	□□□□□ -0.4
NCAM1-222	ENST00000615285	KANK4	Q5T7N3	995 aa	Predicted RBP	12.57	□□□□□ -0.4
NCAM1-222	ENST00000615285	MPHOSPH9	Q99550	1183 aa		12.57	□□□□□ -0.4

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