RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 CHIC1Q5VXU3 224 aa28.23■■■□□ 2.11
CBWD3-211ENST00000615061 JPH4Q96JJ6 628 aa28.19■■■□□ 2.1
CBWD3-211ENST00000615061 RAPGEF2Q9Y4G8 1499 aa28.19■■■□□ 2.1
CBWD3-211ENST00000615061 KIAA0586Q9BVV6 1533 aa28.18■■■□□ 2.1
CBWD3-211ENST00000615061 PRG4Q92954 1404 aaPredicted RBP28.16■■■□□ 2.1
CBWD3-211ENST00000615061 PRXQ9BXM0 1461 aa28.09■■■□□ 2.09
CBWD3-211ENST00000615061 FAM9AQ8IZU1 332 aaPredicted RBP28.05■■■□□ 2.08
CBWD3-211ENST00000615061 CSRNP3Q8WYN3 585 aa28.05■■■□□ 2.08
CBWD3-211ENST00000615061 IQGAP2Q13576 1575 aa28.04■■■□□ 2.08
CBWD3-211ENST00000615061 EEA1Q15075 1411 aa28■■■□□ 2.07
CBWD3-211ENST00000615061 CTTNBP2Q8WZ74 1663 aa27.96■■■□□ 2.07
CBWD3-211ENST00000615061 DISP1Q96F81 1524 aa27.87■■■□□ 2.05
CBWD3-211ENST00000615061 UGGT2Q9NYU1 1516 aa27.87■■■□□ 2.05
CBWD3-211ENST00000615061 CARMIL2Q6F5E8 1435 aa27.85■■■□□ 2.05
CBWD3-211ENST00000615061 TTBK1Q5TCY1 1321 aaPredicted RBP27.85■■■□□ 2.05
CBWD3-211ENST00000615061 TNIKQ9UKE5 1360 aa27.8■■■□□ 2.04
CBWD3-211ENST00000615061 PTPRGP23470 1445 aa27.79■■■□□ 2.04
CBWD3-211ENST00000615061 KIAA0556O60303 1618 aa27.79■■■□□ 2.04
CBWD3-211ENST00000615061 KIF21BO75037 1637 aa27.78■■■□□ 2.04
CBWD3-211ENST00000615061 ADCY10Q96PN6 1610 aa27.76■■■□□ 2.03
CBWD3-211ENST00000615061 TRHP20396 242 aaPredicted RBP27.75■■■□□ 2.03
CBWD3-211ENST00000615061 EHMT2Q96KQ7 1210 aa27.75■■■□□ 2.03
CBWD3-211ENST00000615061 GOLGA3Q08378 1498 aa27.67■■■□□ 2.02
CBWD3-211ENST00000615061 RANGAP1P46060 587 aaPredicted RBP27.63■■■□□ 2.01
CBWD3-211ENST00000615061 P3H3Q8IVL6 736 aa27.62■■■□□ 2.01
CBWD3-211ENST00000615061 NPM1P06748 294 aaKnown RBP eCLIP27.6■■■□□ 2.01
CBWD3-211ENST00000615061 UACAQ9BZF9 1416 aa27.6■■■□□ 2.01
CBWD3-211ENST00000615061 SAMD9Q5K651 1589 aa27.59■■■□□ 2.01
CBWD3-211ENST00000615061 UBTFP17480 764 aaKnown RBP27.58■■■□□ 2
CBWD3-211ENST00000615061 ABCC2Q92887 1545 aa27.56■■■□□ 2
CBWD3-211ENST00000615061 UHRF1BP1LA0JNW5 1464 aa27.56■■■□□ 2
CBWD3-211ENST00000615061 PLB1Q6P1J6 1458 aa27.55■■■□□ 2
CBWD3-211ENST00000615061 MAPKBP1O60336 1514 aa27.54■■■□□ 2
CBWD3-211ENST00000615061 KIF13AQ9H1H9 1805 aa27.51■■□□□ 1.99
CBWD3-211ENST00000615061 ABCA8O94911 1581 aa27.48■■□□□ 1.99
CBWD3-211ENST00000615061 FHOD3Q2V2M9 1422 aa27.46■■□□□ 1.99
CBWD3-211ENST00000615061 KDM5BQ9UGL1 1544 aa27.45■■□□□ 1.99
CBWD3-211ENST00000615061 ZCCHC11Q5TAX3 1644 aaKnown RBP27.44■■□□□ 1.98
CBWD3-211ENST00000615061 ABCC10Q5T3U5 1492 aa27.43■■□□□ 1.98
CBWD3-211ENST00000615061 DIP2BQ9P265 1576 aa27.41■■□□□ 1.98
CBWD3-211ENST00000615061 EFCAB5A4FU69 1503 aa27.41■■□□□ 1.98
CBWD3-211ENST00000615061 ASXL2Q76L83 1435 aa27.4■■□□□ 1.98
CBWD3-211ENST00000615061 FAM69CQ0P6D2 419 aa27.4■■□□□ 1.98
CBWD3-211ENST00000615061 ARID3CA6NKF2 412 aa27.35■■□□□ 1.97
CBWD3-211ENST00000615061 RAPGEF6Q8TEU7 1601 aa27.33■■□□□ 1.97
CBWD3-211ENST00000615061 ARHGAP35Q9NRY4 1499 aa27.33■■□□□ 1.97
CBWD3-211ENST00000615061 ATP10BO94823 1461 aa27.26■■□□□ 1.96
CBWD3-211ENST00000615061 TSPOAP1O95153 1857 aa27.26■■□□□ 1.95
CBWD3-211ENST00000615061 NUP153P49790 1475 aaKnown RBP27.25■■□□□ 1.95
CBWD3-211ENST00000615061 WDR7Q9Y4E6 1490 aa27.24■■□□□ 1.95
CBWD3-211ENST00000615061 EPRSP07814 1512 aaKnown RBP27.24■■□□□ 1.95
CBWD3-211ENST00000615061 GLI2P10070 1586 aa27.2■■□□□ 1.95
CBWD3-211ENST00000615061 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.16■■□□□ 1.94
CBWD3-211ENST00000615061 HNRNPUL2Q1KMD3 747 aaKnown RBP27.16■■□□□ 1.94
CBWD3-211ENST00000615061 KCNH8Q96L42 1107 aa27.16■■□□□ 1.94
CBWD3-211ENST00000615061 FMN1Q68DA7 1419 aa27.15■■□□□ 1.94
CBWD3-211ENST00000615061 CLIP1P30622 1438 aa27.13■■□□□ 1.93
CBWD3-211ENST00000615061 LOC105371045A0A1W2PR82 267 aa27.13■■□□□ 1.93
CBWD3-211ENST00000615061 PPRC1Q5VV67 1664 aaKnown RBP27.13■■□□□ 1.93
CBWD3-211ENST00000615061 MAP3K4Q9Y6R4 1608 aa27.12■■□□□ 1.93
CBWD3-211ENST00000615061 ATP1B4Q9UN42 357 aaPredicted RBP27.09■■□□□ 1.93
CBWD3-211ENST00000615061 CDK13Q14004 1512 aaKnown RBP27.09■■□□□ 1.93
CBWD3-211ENST00000615061 HECW1Q76N89 1606 aa27.06■■□□□ 1.92
CBWD3-211ENST00000615061 LRRIQ1Q96JM4 1722 aa27.02■■□□□ 1.92
CBWD3-211ENST00000615061 CFAP43Q8NDM7 1665 aa27.02■■□□□ 1.92
CBWD3-211ENST00000615061 PCF11O94913 1555 aaKnown RBP27.02■■□□□ 1.92
CBWD3-211ENST00000615061 CEP162Q5TB80 1403 aa27.01■■□□□ 1.91
CBWD3-211ENST00000615061 CD109Q6YHK3 1445 aa26.99■■□□□ 1.91
CBWD3-211ENST00000615061 PLEKHD1A6NEE1 506 aa26.99■■□□□ 1.91
CBWD3-211ENST00000615061 KDM6BO15054 1643 aa26.98■■□□□ 1.91
CBWD3-211ENST00000615061 CASKIN1Q8WXD9 1431 aa26.96■■□□□ 1.91
CBWD3-211ENST00000615061 ABCA9Q8IUA7 1624 aa26.96■■□□□ 1.91
CBWD3-211ENST00000615061 TEX14Q8IWB6 1497 aa26.94■■□□□ 1.9
CBWD3-211ENST00000615061 MAGI3Q5TCQ9 1506 aa26.92■■□□□ 1.9
CBWD3-211ENST00000615061 FYCO1Q9BQS8 1478 aa26.89■■□□□ 1.9
CBWD3-211ENST00000615061 COL17A1Q9UMD9 1497 aaPredicted RBP26.89■■□□□ 1.9
CBWD3-211ENST00000615061 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.86■■□□□ 1.89
CBWD3-211ENST00000615061 TTC37Q6PGP7 1564 aa26.85■■□□□ 1.89
CBWD3-211ENST00000615061 CCDC18Q5T9S5 1454 aa26.84■■□□□ 1.89
CBWD3-211ENST00000615061 CDK11AQ9UQ88 783 aaPredicted RBP26.83■■□□□ 1.89
CBWD3-211ENST00000615061 KIF14Q15058 1648 aa26.8■■□□□ 1.88
CBWD3-211ENST00000615061 TROQ12816 1431 aaPredicted RBP26.8■■□□□ 1.88
CBWD3-211ENST00000615061 NEO1Q92859 1461 aa26.71■■□□□ 1.87
CBWD3-211ENST00000615061 ARAP3Q8WWN8 1544 aa26.69■■□□□ 1.86
CBWD3-211ENST00000615061 FANCAO15360 1455 aa26.68■■□□□ 1.86
CBWD3-211ENST00000615061 MYO5CQ9NQX4 1742 aa26.68■■□□□ 1.86
CBWD3-211ENST00000615061 PLCH2O75038 1416 aa26.67■■□□□ 1.86
CBWD3-211ENST00000615061 VPS8Q8N3P4 1428 aa26.67■■□□□ 1.86
CBWD3-211ENST00000615061 PHLDB1Q86UU1 1377 aa26.65■■□□□ 1.86
CBWD3-211ENST00000615061 AKNAQ7Z591 1439 aa26.63■■□□□ 1.85
CBWD3-211ENST00000615061 RAPGEF3O95398 923 aa26.63■■□□□ 1.85
CBWD3-211ENST00000615061 CFAP74Q9C0B2 1584 aa26.62■■□□□ 1.85
CBWD3-211ENST00000615061 CDC42BPBQ9Y5S2 1711 aa26.59■■□□□ 1.85
CBWD3-211ENST00000615061 FRMPD1Q5SYB0 1578 aa26.59■■□□□ 1.85
CBWD3-211ENST00000615061 MTUS2Q5JR59 1369 aa26.58■■□□□ 1.85
CBWD3-211ENST00000615061 ARHGAP5Q13017 1502 aa26.57■■□□□ 1.84
CBWD3-211ENST00000615061 CDC42BPAQ5VT25 1732 aa26.56■■□□□ 1.84
CBWD3-211ENST00000615061 PREX2Q70Z35 1606 aa26.55■■□□□ 1.84
CBWD3-211ENST00000615061 EFCAB2Q5VUJ9 269 aa26.55■■□□□ 1.84
CBWD3-211ENST00000615061 TIAM1Q13009 1591 aa26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms