RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 TDRD9Q8NDG6 1382 aaKnown RBP13.74□□□□□ -0.21
VPS11-206ENST00000614944 CEP162Q5TB80 1403 aa13.72□□□□□ -0.21
VPS11-206ENST00000614944 AQRO60306 1485 aaKnown RBP eCLIP13.71□□□□□ -0.216e-11■■■■□ 25.1
VPS11-206ENST00000614944 EFCAB5A4FU69 1503 aa13.7□□□□□ -0.22
VPS11-206ENST00000614944 SYNJ2O15056 1496 aa13.7□□□□□ -0.22
VPS11-206ENST00000614944 SNAPC4Q5SXM2 1469 aa13.68□□□□□ -0.22
VPS11-206ENST00000614944 SAMD9Q5K651 1589 aa13.66□□□□□ -0.22
VPS11-206ENST00000614944 GRIN2AQ12879 1464 aa13.65□□□□□ -0.22
VPS11-206ENST00000614944 PPARGC1BQ86YN6 1023 aaKnown RBP13.64□□□□□ -0.23
VPS11-206ENST00000614944 CLIP1P30622 1438 aa13.63□□□□□ -0.23
VPS11-206ENST00000614944 NUP160Q12769 1436 aa13.62□□□□□ -0.23
VPS11-206ENST00000614944 UGGT2Q9NYU1 1516 aa13.62□□□□□ -0.23
VPS11-206ENST00000614944 IQGAP2Q13576 1575 aa13.61□□□□□ -0.23
VPS11-206ENST00000614944 KIAA0586Q9BVV6 1533 aa13.61□□□□□ -0.23
VPS11-206ENST00000614944 UBTFP17480 764 aaKnown RBP13.6□□□□□ -0.23
VPS11-206ENST00000614944 ARHGAP35Q9NRY4 1499 aa13.58□□□□□ -0.23
VPS11-206ENST00000614944 ARAP1Q96P48 1450 aa13.58□□□□□ -0.24
VPS11-206ENST00000614944 DAXXQ9UER7 740 aaPredicted RBP13.58□□□□□ -0.24
VPS11-206ENST00000614944 CEP170Q5SW79 1584 aa13.58□□□□□ -0.24
VPS11-206ENST00000614944 VPS8Q8N3P4 1428 aa13.57□□□□□ -0.24
VPS11-206ENST00000614944 CHD1O14646 1710 aa13.57□□□□□ -0.24
VPS11-206ENST00000614944 CENPBP07199 599 aaPredicted RBP13.57□□□□□ -0.24
VPS11-206ENST00000614944 MAP3K1Q13233 1512 aa13.56□□□□□ -0.24
VPS11-206ENST00000614944 SHROOM2Q13796 1616 aa13.54□□□□□ -0.24
VPS11-206ENST00000614944 CLASP1Q7Z460 1538 aa13.5□□□□□ -0.25
VPS11-206ENST00000614944 KIAA0556O60303 1618 aa13.5□□□□□ -0.25
VPS11-206ENST00000614944 FYCO1Q9BQS8 1478 aa13.47□□□□□ -0.25
VPS11-206ENST00000614944 CFAP43Q8NDM7 1665 aa13.47□□□□□ -0.25
VPS11-206ENST00000614944 FMN1Q68DA7 1419 aa13.47□□□□□ -0.25
VPS11-206ENST00000614944 DISP1Q96F81 1524 aa13.46□□□□□ -0.26
VPS11-206ENST00000614944 CASKIN1Q8WXD9 1431 aa13.44□□□□□ -0.26
VPS11-206ENST00000614944 CHMP7Q8WUX9 453 aaPredicted RBP13.44□□□□□ -0.26
VPS11-206ENST00000614944 PCF11O94913 1555 aaKnown RBP13.41□□□□□ -0.26
VPS11-206ENST00000614944 HECW1Q76N89 1606 aa13.39□□□□□ -0.27
VPS11-206ENST00000614944 TIAM1Q13009 1591 aa13.39□□□□□ -0.27
VPS11-206ENST00000614944 CARMIL2Q6F5E8 1435 aa13.39□□□□□ -0.27
VPS11-206ENST00000614944 CCDC18Q5T9S5 1454 aa13.37□□□□□ -0.27
VPS11-206ENST00000614944 EHMT2Q96KQ7 1210 aa13.36□□□□□ -0.27
VPS11-206ENST00000614944 FHOD3Q2V2M9 1422 aa13.36□□□□□ -0.27
VPS11-206ENST00000614944 LRRIQ1Q96JM4 1722 aa13.35□□□□□ -0.27
VPS11-206ENST00000614944 EIF5BO60841 1220 aaKnown RBP13.35□□□□□ -0.27
VPS11-206ENST00000614944 RAPGEF6Q8TEU7 1601 aa13.34□□□□□ -0.27
VPS11-206ENST00000614944 ABCA8O94911 1581 aa13.34□□□□□ -0.27
VPS11-206ENST00000614944 JPH4Q96JJ6 628 aa13.31□□□□□ -0.28
VPS11-206ENST00000614944 ACIN1Q9UKV3 1341 aaKnown RBP13.3□□□□□ -0.28
VPS11-206ENST00000614944 LRRC9Q6ZRR7 1453 aa13.28□□□□□ -0.28
VPS11-206ENST00000614944 PRG4Q92954 1404 aaPredicted RBP13.28□□□□□ -0.28
VPS11-206ENST00000614944 EHBP1L1Q8N3D4 1523 aa13.28□□□□□ -0.28
VPS11-206ENST00000614944 UHRF1BP1LA0JNW5 1464 aa13.27□□□□□ -0.28
VPS11-206ENST00000614944 ADCY10Q96PN6 1610 aa13.26□□□□□ -0.29
VPS11-206ENST00000614944 ARHGEF11O15085 1522 aa13.26□□□□□ -0.29
VPS11-206ENST00000614944 EPRSP07814 1512 aaKnown RBP13.26□□□□□ -0.29
VPS11-206ENST00000614944 NUP153P49790 1475 aaKnown RBP13.24□□□□□ -0.29
VPS11-206ENST00000614944 FBLN2P98095 1184 aa13.24□□□□□ -0.29
VPS11-206ENST00000614944 TRIM26Q12899 539 aaPredicted RBP13.24□□□□□ -0.29
VPS11-206ENST00000614944 ANP32EQ9BTT0 268 aa13.23□□□□□ -0.29
VPS11-206ENST00000614944 GTF3C3Q9Y5Q9 886 aa13.23□□□□□ -0.29
VPS11-206ENST00000614944 SUPT6HQ7KZ85 1726 aaKnown RBP13.22□□□□□ -0.29
VPS11-206ENST00000614944 ABCC2Q92887 1545 aa13.21□□□□□ -0.29
VPS11-206ENST00000614944 RRBP1Q9P2E9 1410 aaKnown RBP13.2□□□□□ -0.3
VPS11-206ENST00000614944 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.2□□□□□ -0.3
VPS11-206ENST00000614944 PTPRGP23470 1445 aa13.19□□□□□ -0.3
VPS11-206ENST00000614944 PCGF6Q9BYE7 350 aa13.18□□□□□ -0.3
VPS11-206ENST00000614944 ERCC6L2Q5T890 1561 aa13.18□□□□□ -0.3
VPS11-206ENST00000614944 UACAQ9BZF9 1416 aa13.18□□□□□ -0.3
VPS11-206ENST00000614944 OSCARQ8IYS5 282 aa13.18□□□□□ -0.3
VPS11-206ENST00000614944 MAGI3Q5TCQ9 1506 aa13.16□□□□□ -0.3
VPS11-206ENST00000614944 PLB1Q6P1J6 1458 aa13.16□□□□□ -0.3
VPS11-206ENST00000614944 RANGAP1P46060 587 aaPredicted RBP13.15□□□□□ -0.3
VPS11-206ENST00000614944 P3H3Q8IVL6 736 aa13.15□□□□□ -0.3
VPS11-206ENST00000614944 KDM5BQ9UGL1 1544 aa13.15□□□□□ -0.31
VPS11-206ENST00000614944 NEUROD1Q13562 356 aa13.14□□□□□ -0.31
VPS11-206ENST00000614944 CDK13Q14004 1512 aaKnown RBP13.13□□□□□ -0.31
VPS11-206ENST00000614944 ITSN2Q9NZM3 1697 aa13.12□□□□□ -0.31
VPS11-206ENST00000614944 ATP10BO94823 1461 aa13.12□□□□□ -0.31
VPS11-206ENST00000614944 TROQ12816 1431 aaPredicted RBP13.12□□□□□ -0.31
VPS11-206ENST00000614944 KANK4Q5T7N3 995 aaPredicted RBP13.12□□□□□ -0.31
VPS11-206ENST00000614944 TCOF1Q13428 1488 aaKnown RBP13.11□□□□□ -0.31
VPS11-206ENST00000614944 ZCCHC11Q5TAX3 1644 aaKnown RBP13.11□□□□□ -0.31
VPS11-206ENST00000614944 NCOA2Q15596 1464 aa13.1□□□□□ -0.31
VPS11-206ENST00000614944 MIA2Q96PC5 1412 aa13.1□□□□□ -0.31
VPS11-206ENST00000614944 KIF14Q15058 1648 aa13.09□□□□□ -0.31
VPS11-206ENST00000614944 MTUS2Q5JR59 1369 aa13.09□□□□□ -0.31
VPS11-206ENST00000614944 CDK11AQ9UQ88 783 aaPredicted RBP13.08□□□□□ -0.32
VPS11-206ENST00000614944 MYOM3Q5VTT5 1437 aa13.07□□□□□ -0.32
VPS11-206ENST00000614944 ABCC10Q5T3U5 1492 aa13.06□□□□□ -0.32
VPS11-206ENST00000614944 PHLDB1Q86UU1 1377 aa13.05□□□□□ -0.32
VPS11-206ENST00000614944 ARAP3Q8WWN8 1544 aa13.05□□□□□ -0.32
VPS11-206ENST00000614944 CCNB3Q8WWL7 1395 aa13.05□□□□□ -0.32
VPS11-206ENST00000614944 FGD6Q6ZV73 1430 aa13.04□□□□□ -0.32
VPS11-206ENST00000614944 PTPN23Q9H3S7 1636 aa13.04□□□□□ -0.32
VPS11-206ENST00000614944 RIMBP3CA6NJZ7 1639 aa13.03□□□□□ -0.32
VPS11-206ENST00000614944 RIMBP3BA6NNM3 1639 aa13.03□□□□□ -0.32
VPS11-206ENST00000614944 RIMBP3Q9UFD9 1639 aa13.03□□□□□ -0.32
VPS11-206ENST00000614944 CDC42BPAQ5VT25 1732 aa13.03□□□□□ -0.32
VPS11-206ENST00000614944 PREX2Q70Z35 1606 aa13.02□□□□□ -0.32
VPS11-206ENST00000614944 UBE2Q2Q8WVN8 375 aa13.02□□□□□ -0.32
VPS11-206ENST00000614944 PLEKHG5O94827 1062 aa13.01□□□□□ -0.33
VPS11-206ENST00000614944 ZEB1P37275 1124 aaPredicted RBP13.01□□□□□ -0.33
VPS11-206ENST00000614944 MAPKBP1O60336 1514 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms