RNA–Protein interactions for RNA: ENST00000614640.4

MSRB3-212, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MSRB3, Length 4,270 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-212ENST00000614640 ATP1B4Q9UN42 357 aaPredicted RBP13.59□□□□□ -0.23
MSRB3-212ENST00000614640 NEUROD1Q13562 356 aa13.57□□□□□ -0.24
MSRB3-212ENST00000614640 FBLN2P98095 1184 aa13.57□□□□□ -0.24
MSRB3-212ENST00000614640 ACIN1Q9UKV3 1341 aaKnown RBP13.56□□□□□ -0.24
MSRB3-212ENST00000614640 DHX57Q6P158 1386 aaKnown RBP13.56□□□□□ -0.24
MSRB3-212ENST00000614640 CHMP7Q8WUX9 453 aaPredicted RBP13.56□□□□□ -0.24
MSRB3-212ENST00000614640 WDR62O43379 1518 aa13.55□□□□□ -0.24
MSRB3-212ENST00000614640 GRIN2BQ13224 1484 aa13.55□□□□□ -0.24
MSRB3-212ENST00000614640 CUL7Q14999 1698 aa13.54□□□□□ -0.24
MSRB3-212ENST00000614640 AQRO60306 1485 aaKnown RBP eCLIP13.53□□□□□ -0.24
MSRB3-212ENST00000614640 TIAM1Q13009 1591 aa13.52□□□□□ -0.25
MSRB3-212ENST00000614640 FHAD1B1AJZ9 1412 aa13.52□□□□□ -0.25
MSRB3-212ENST00000614640 P3H3Q8IVL6 736 aa13.51□□□□□ -0.25
MSRB3-212ENST00000614640 MAP3K1Q13233 1512 aa13.51□□□□□ -0.25
MSRB3-212ENST00000614640 CCNB3Q8WWL7 1395 aa13.5□□□□□ -0.25
MSRB3-212ENST00000614640 CLSPNQ9HAW4 1339 aa13.5□□□□□ -0.25
MSRB3-212ENST00000614640 LRRC9Q6ZRR7 1453 aa13.45□□□□□ -0.26
MSRB3-212ENST00000614640 TARBP1Q13395 1621 aaKnown RBP13.45□□□□□ -0.26
MSRB3-212ENST00000614640 ABCA5Q8WWZ7 1642 aa13.45□□□□□ -0.26
MSRB3-212ENST00000614640 PCF11O94913 1555 aaKnown RBP13.45□□□□□ -0.26
MSRB3-212ENST00000614640 CFAP43Q8NDM7 1665 aa13.45□□□□□ -0.26
MSRB3-212ENST00000614640 WDR97A6NE52 1622 aa13.45□□□□□ -0.26
MSRB3-212ENST00000614640 MIER1Q8N108 512 aa13.44□□□□□ -0.26
MSRB3-212ENST00000614640 CENPBP07199 599 aaPredicted RBP13.43□□□□□ -0.26
MSRB3-212ENST00000614640 ZNF608Q9ULD9 1512 aaPredicted RBP13.42□□□□□ -0.26
MSRB3-212ENST00000614640 PHLDB1Q86UU1 1377 aa13.41□□□□□ -0.26
MSRB3-212ENST00000614640 THOC2Q8NI27 1593 aaKnown RBP13.41□□□□□ -0.26
MSRB3-212ENST00000614640 CTTNBP2Q8WZ74 1663 aa13.41□□□□□ -0.26
MSRB3-212ENST00000614640 SNAPC4Q5SXM2 1469 aa13.4□□□□□ -0.26
MSRB3-212ENST00000614640 FMN1Q68DA7 1419 aa13.39□□□□□ -0.27
MSRB3-212ENST00000614640 MAGI1Q96QZ7 1491 aaPredicted RBP13.39□□□□□ -0.27
MSRB3-212ENST00000614640 FHOD3Q2V2M9 1422 aa13.39□□□□□ -0.27
MSRB3-212ENST00000614640 GTF3C3Q9Y5Q9 886 aa13.39□□□□□ -0.27
MSRB3-212ENST00000614640 EFCAB5A4FU69 1503 aa13.38□□□□□ -0.27
MSRB3-212ENST00000614640 RAB3GAP2Q9H2M9 1393 aa13.38□□□□□ -0.27
MSRB3-212ENST00000614640 ITGAEP38570 1179 aa13.38□□□□□ -0.27
MSRB3-212ENST00000614640 MAPKBP1O60336 1514 aa13.38□□□□□ -0.27
MSRB3-212ENST00000614640 FYCO1Q9BQS8 1478 aa13.36□□□□□ -0.27
MSRB3-212ENST00000614640 CASKIN1Q8WXD9 1431 aa13.34□□□□□ -0.27
MSRB3-212ENST00000614640 PBRM1Q86U86 1689 aa13.34□□□□□ -0.27
MSRB3-212ENST00000614640 SYNJ2O15056 1496 aa13.34□□□□□ -0.27
MSRB3-212ENST00000614640 ADAMTS12P58397 1594 aa13.34□□□□□ -0.27
MSRB3-212ENST00000614640 EIF4G3O43432 1585 aaKnown RBP13.34□□□□□ -0.27
MSRB3-212ENST00000614640 YTHDC1Q96MU7 727 aaKnown RBP13.33□□□□□ -0.28
MSRB3-212ENST00000614640 CARMIL2Q6F5E8 1435 aa13.32□□□□□ -0.28
MSRB3-212ENST00000614640 SETD5Q9C0A6 1442 aa13.32□□□□□ -0.28
MSRB3-212ENST00000614640 GRIN2AQ12879 1464 aa13.32□□□□□ -0.28
MSRB3-212ENST00000614640 KIAA0586Q9BVV6 1533 aa13.31□□□□□ -0.28
MSRB3-212ENST00000614640 LRRIQ1Q96JM4 1722 aa13.31□□□□□ -0.28
MSRB3-212ENST00000614640 SAMD9Q5K651 1589 aa13.31□□□□□ -0.28
MSRB3-212ENST00000614640 CDK11AQ9UQ88 783 aaPredicted RBP13.31□□□□□ -0.28
MSRB3-212ENST00000614640 IQGAP2Q13576 1575 aa13.29□□□□□ -0.28
MSRB3-212ENST00000614640 JPH4Q96JJ6 628 aa13.29□□□□□ -0.28
MSRB3-212ENST00000614640 MTUS2Q5JR59 1369 aa13.28□□□□□ -0.28
MSRB3-212ENST00000614640 FAM50AQ14320 339 aaKnown RBP13.27□□□□□ -0.29
MSRB3-212ENST00000614640 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.26□□□□□ -0.29
MSRB3-212ENST00000614640 PELP1Q8IZL8 1130 aaKnown RBP13.23□□□□□ -0.29
MSRB3-212ENST00000614640 FGD6Q6ZV73 1430 aa13.22□□□□□ -0.29
MSRB3-212ENST00000614640 ARID3CA6NKF2 412 aa13.21□□□□□ -0.29
MSRB3-212ENST00000614640 SIN3AQ96ST3 1273 aa13.2□□□□□ -0.3
MSRB3-212ENST00000614640 PTPRKQ15262 1439 aa13.19□□□□□ -0.3
MSRB3-212ENST00000614640 UGGT2Q9NYU1 1516 aa13.19□□□□□ -0.3
MSRB3-212ENST00000614640 CCDC18Q5T9S5 1454 aa13.17□□□□□ -0.3
MSRB3-212ENST00000614640 NUP160Q12769 1436 aa13.17□□□□□ -0.3
MSRB3-212ENST00000614640 MAGI3Q5TCQ9 1506 aa13.17□□□□□ -0.3
MSRB3-212ENST00000614640 NCOA2Q15596 1464 aa13.17□□□□□ -0.3
MSRB3-212ENST00000614640 ARHGEF11O15085 1522 aa13.15□□□□□ -0.3
MSRB3-212ENST00000614640 SUPT6HQ7KZ85 1726 aaKnown RBP13.15□□□□□ -0.3
MSRB3-212ENST00000614640 PTPN23Q9H3S7 1636 aa13.14□□□□□ -0.31
MSRB3-212ENST00000614640 EHBP1L1Q8N3D4 1523 aa13.14□□□□□ -0.31
MSRB3-212ENST00000614640 MYOM3Q5VTT5 1437 aa13.14□□□□□ -0.31
MSRB3-212ENST00000614640 PLEKHD1A6NEE1 506 aa13.14□□□□□ -0.31
MSRB3-212ENST00000614640 HFM1A2PYH4 1435 aa13.14□□□□□ -0.31
MSRB3-212ENST00000614640 PTPRGP23470 1445 aa13.13□□□□□ -0.31
MSRB3-212ENST00000614640 PRG4Q92954 1404 aaPredicted RBP13.12□□□□□ -0.31
MSRB3-212ENST00000614640 HECW1Q76N89 1606 aa13.12□□□□□ -0.31
MSRB3-212ENST00000614640 TIMELESSQ9UNS1 1208 aa13.11□□□□□ -0.31
MSRB3-212ENST00000614640 NAIPQ13075 1403 aa13.11□□□□□ -0.31
MSRB3-212ENST00000614640 CEP170Q5SW79 1584 aa13.1□□□□□ -0.31
MSRB3-212ENST00000614640 KIAA0556O60303 1618 aa13.09□□□□□ -0.31
MSRB3-212ENST00000614640 OSCARQ8IYS5 282 aa13.09□□□□□ -0.31
MSRB3-212ENST00000614640 UACAQ9BZF9 1416 aa13.09□□□□□ -0.31
MSRB3-212ENST00000614640 PPP1R15AO75807 674 aaPredicted RBP13.08□□□□□ -0.32
MSRB3-212ENST00000614640 DISP1Q96F81 1524 aa13.07□□□□□ -0.32
MSRB3-212ENST00000614640 EPRSP07814 1512 aaKnown RBP13.07□□□□□ -0.32
MSRB3-212ENST00000614640 TCOF1Q13428 1488 aaKnown RBP13.07□□□□□ -0.32
MSRB3-212ENST00000614640 KCNH8Q96L42 1107 aa13.06□□□□□ -0.32
MSRB3-212ENST00000614640 CDK13Q14004 1512 aaKnown RBP13.05□□□□□ -0.32
MSRB3-212ENST00000614640 KDM5BQ9UGL1 1544 aa13.04□□□□□ -0.32
MSRB3-212ENST00000614640 NPM1P06748 294 aaKnown RBP eCLIP13.04□□□□□ -0.32
MSRB3-212ENST00000614640 GCC2Q8IWJ2 1684 aa13.04□□□□□ -0.32
MSRB3-212ENST00000614640 DENND4BO75064 1496 aaPredicted RBP13.03□□□□□ -0.32
MSRB3-212ENST00000614640 KDM6BO15054 1643 aa13.02□□□□□ -0.33
MSRB3-212ENST00000614640 DDX10Q13206 875 aaKnown RBP13.02□□□□□ -0.33
MSRB3-212ENST00000614640 HIRIP3Q9BW71 556 aaPredicted RBP13.01□□□□□ -0.33
MSRB3-212ENST00000614640 CFDP1Q9UEE9 299 aaPredicted RBP13.01□□□□□ -0.33
MSRB3-212ENST00000614640 ZNF777Q9ULD5 760 aaPredicted RBP13□□□□□ -0.33
MSRB3-212ENST00000614640 RAPGEF6Q8TEU7 1601 aa13□□□□□ -0.33
MSRB3-212ENST00000614640 PLB1Q6P1J6 1458 aa13□□□□□ -0.33
MSRB3-212ENST00000614640 TONSLQ96HA7 1378 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms