RNA–Protein interactions for RNA: ENST00000614136.1

SRSF3-205, Transcript of serine and arginine rich splicing factor 3, humanhuman

Gene SRSF3, Length 2,376 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-205ENST00000614136 ATXN8OSP0DMR3 200 aa8.68□□□□□ -1.02
SRSF3-205ENST00000614136 PRR29P0C7W0 189 aa8.68□□□□□ -1.02
SRSF3-205ENST00000614136 ATAD2BQ9ULI0 1458 aa8.67□□□□□ -1.02
SRSF3-205ENST00000614136 PCDH10Q9P2E7 1040 aa8.65□□□□□ -1.02
SRSF3-205ENST00000614136 CC2D2AQ9P2K1 1620 aa8.64□□□□□ -1.03
SRSF3-205ENST00000614136 SMARCA2P51531 1590 aa8.63□□□□□ -1.03
SRSF3-205ENST00000614136 NCAPD3P42695 1498 aa8.62□□□□□ -1.03
SRSF3-205ENST00000614136 BAZ1BQ9UIG0 1483 aaKnown RBP8.62□□□□□ -1.03
SRSF3-205ENST00000614136 POTEMA6NI47 508 aa8.61□□□□□ -1.03
SRSF3-205ENST00000614136 PEG3Q9GZU2 1588 aa8.61□□□□□ -1.03
SRSF3-205ENST00000614136 FARP1Q9Y4F1 1045 aaPredicted RBP8.59□□□□□ -1.03
SRSF3-205ENST00000614136 POTEGQ6S5H5 508 aa8.57□□□□□ -1.04
SRSF3-205ENST00000614136 TOP2AP11388 1531 aaKnown RBP8.57□□□□□ -1.04
SRSF3-205ENST00000614136 SLC24A1O60721 1099 aa8.56□□□□□ -1.04
SRSF3-205ENST00000614136 ZNF579Q8NAF0 562 aaKnown RBP8.56□□□□□ -1.04
SRSF3-205ENST00000614136 OTUD5Q96G74 571 aa8.56□□□□□ -1.04
SRSF3-205ENST00000614136 CCDC88BA6NC98 1476 aa8.56□□□□□ -1.04
SRSF3-205ENST00000614136 RTN4Q9NQC3 1192 aaKnown RBP8.54□□□□□ -1.04
SRSF3-205ENST00000614136 MKRN4PQ13434 485 aaPredicted RBP8.53□□□□□ -1.04
SRSF3-205ENST00000614136 HMGXB3Q12766 1538 aa8.52□□□□□ -1.04
SRSF3-205ENST00000614136 ZRANB1Q9UGI0 708 aa8.47□□□□□ -1.05
SRSF3-205ENST00000614136 AMER1Q5JTC6 1135 aaPredicted RBP8.44□□□□□ -1.06
SRSF3-205ENST00000614136 CADPSQ9ULU8 1353 aa8.42□□□□□ -1.06
SRSF3-205ENST00000614136 POTEB2H3BUK9 544 aa8.41□□□□□ -1.06
SRSF3-205ENST00000614136 TRIM41Q8WV44 630 aa8.41□□□□□ -1.06
SRSF3-205ENST00000614136 GALR2O43603 387 aaPredicted RBP8.4□□□□□ -1.06
SRSF3-205ENST00000614136 MAMSTRQ6ZN01 415 aa8.4□□□□□ -1.06
SRSF3-205ENST00000614136 CFTRP13569 1480 aa8.39□□□□□ -1.07
SRSF3-205ENST00000614136 NESP48681 1621 aa8.39□□□□□ -1.07
SRSF3-205ENST00000614136 PAK3O75914 559 aaPredicted RBP8.37□□□□□ -1.07
SRSF3-205ENST00000614136 ABCC8Q09428 1581 aa8.33□□□□□ -1.08
SRSF3-205ENST00000614136 PDS5BQ9NTI5 1447 aa8.31□□□□□ -1.08
SRSF3-205ENST00000614136 C7P10643 843 aa8.31□□□□□ -1.08
SRSF3-205ENST00000614136 SLC39A7Q92504 469 aa8.31□□□□□ -1.08
SRSF3-205ENST00000614136 FANCD2Q9BXW9 1451 aa8.31□□□□□ -1.08
SRSF3-205ENST00000614136 LAMC3Q9Y6N6 1575 aa8.3□□□□□ -1.08
SRSF3-205ENST00000614136 WRNQ14191 1432 aaPredicted RBP eCLIP8.3□□□□□ -1.08
SRSF3-205ENST00000614136 FAM9AQ8IZU1 332 aaPredicted RBP8.29□□□□□ -1.08
SRSF3-205ENST00000614136 STAG3Q9UJ98 1225 aa8.29□□□□□ -1.08
SRSF3-205ENST00000614136 METRNQ9UJH8 293 aa8.29□□□□□ -1.08
SRSF3-205ENST00000614136 FKBP8Q14318 412 aa8.28□□□□□ -1.08
SRSF3-205ENST00000614136 CREBZFQ9NS37 354 aa8.28□□□□□ -1.08
SRSF3-205ENST00000614136 SCUBE2Q9NQ36 999 aa8.27□□□□□ -1.09
SRSF3-205ENST00000614136 PELP1Q8IZL8 1130 aaKnown RBP8.27□□□□□ -1.09
SRSF3-205ENST00000614136 FAM163AQ96GL9 167 aaPredicted RBP8.27□□□□□ -1.09
SRSF3-205ENST00000614136 ASTLQ6HA08 431 aaPredicted RBP8.25□□□□□ -1.09
SRSF3-205ENST00000614136 PHF12Q96QT6 1004 aa8.25□□□□□ -1.09
SRSF3-205ENST00000614136 ERCC6Q03468 1493 aa8.25□□□□□ -1.09
SRSF3-205ENST00000614136 CEP164Q9UPV0 1460 aa8.25□□□□□ -1.09
SRSF3-205ENST00000614136 LCE2DQ5TA82 110 aaPredicted RBP8.24□□□□□ -1.09
SRSF3-205ENST00000614136 NPM1P06748 294 aaKnown RBP eCLIP8.23□□□□□ -1.09
SRSF3-205ENST00000614136 SYNJ1O43426 1573 aa8.22□□□□□ -1.09
SRSF3-205ENST00000614136 PRDM2Q13029 1718 aa8.22□□□□□ -1.09
SRSF3-205ENST00000614136 CUX1P39880 1505 aa8.21□□□□□ -1.09
SRSF3-205ENST00000614136 KIF21AQ7Z4S6 1674 aa8.21□□□□□ -1.1
SRSF3-205ENST00000614136 ATMINO43313 823 aaPredicted RBP8.2□□□□□ -1.1
SRSF3-205ENST00000614136 LOC105371045A0A1W2PR82 267 aa8.2□□□□□ -1.1
SRSF3-205ENST00000614136 POTEJP0CG39 1038 aa8.2□□□□□ -1.1
SRSF3-205ENST00000614136 SOGA1O94964 1423 aa8.19□□□□□ -1.1
SRSF3-205ENST00000614136 URB2Q14146 1524 aaKnown RBP8.19□□□□□ -1.1
SRSF3-205ENST00000614136 TOP2BQ02880 1626 aa8.18□□□□□ -1.1
SRSF3-205ENST00000614136 TOPBP1Q92547 1522 aa8.18□□□□□ -1.1
SRSF3-205ENST00000614136 FGD5Q6ZNL6 1462 aa8.16□□□□□ -1.1
SRSF3-205ENST00000614136 MRC2Q9UBG0 1479 aa8.16□□□□□ -1.1
SRSF3-205ENST00000614136 CDAN1Q8IWY9 1227 aa8.16□□□□□ -1.1
SRSF3-205ENST00000614136 RUSC2Q8N2Y8 1516 aa8.16□□□□□ -1.1
SRSF3-205ENST00000614136 RAD54L2Q9Y4B4 1467 aa8.15□□□□□ -1.1
SRSF3-205ENST00000614136 DNMBPQ6XZF7 1577 aa8.15□□□□□ -1.1
SRSF3-205ENST00000614136 POLA1P09884 1462 aaPredicted RBP8.14□□□□□ -1.11
SRSF3-205ENST00000614136 MS4A3Q96HJ5 214 aa8.14□□□□□ -1.11
SRSF3-205ENST00000614136 BIVM-ERCC5R4GMW8 1640 aa8.14□□□□□ -1.11
SRSF3-205ENST00000614136 TDRD9Q8NDG6 1382 aaKnown RBP8.13□□□□□ -1.11
SRSF3-205ENST00000614136 CUX2O14529 1486 aa8.11□□□□□ -1.11
SRSF3-205ENST00000614136 KIF27Q86VH2 1401 aa8.11□□□□□ -1.11
SRSF3-205ENST00000614136 UBTFP17480 764 aaKnown RBP8.1□□□□□ -1.11
SRSF3-205ENST00000614136 WDR62O43379 1518 aa8.09□□□□□ -1.11
SRSF3-205ENST00000614136 AQRO60306 1485 aaKnown RBP eCLIP8.08□□□□□ -1.125e-15■■■■■ 31.3
SRSF3-205ENST00000614136 IGF1RP08069 1367 aa8.08□□□□□ -1.12
SRSF3-205ENST00000614136 THOC2Q8NI27 1593 aaKnown RBP8.07□□□□□ -1.12
SRSF3-205ENST00000614136 EEA1Q15075 1411 aa8.07□□□□□ -1.12
SRSF3-205ENST00000614136 ABCA10Q8WWZ4 1543 aa8.07□□□□□ -1.12
SRSF3-205ENST00000614136 IFT140Q96RY7 1462 aa8.06□□□□□ -1.12
SRSF3-205ENST00000614136 RANGAP1P46060 587 aaPredicted RBP8.05□□□□□ -1.12
SRSF3-205ENST00000614136 ATN1P54259 1190 aaPredicted RBP8.05□□□□□ -1.12
SRSF3-205ENST00000614136 ZNF608Q9ULD9 1512 aaPredicted RBP8.05□□□□□ -1.12
SRSF3-205ENST00000614136 GAPVD1Q14C86 1478 aa8.04□□□□□ -1.12
SRSF3-205ENST00000614136 TARBP1Q13395 1621 aaKnown RBP8.04□□□□□ -1.12
SRSF3-205ENST00000614136 CARMIL1Q5VZK9 1371 aa8.03□□□□□ -1.12
SRSF3-205ENST00000614136 MNX1P50219 401 aaPredicted RBP8.03□□□□□ -1.12
SRSF3-205ENST00000614136 SPDYE4A6NLX3 237 aa8.02□□□□□ -1.13
SRSF3-205ENST00000614136 MMRN1Q13201 1228 aa8.01□□□□□ -1.13
SRSF3-205ENST00000614136 RAPGEF2Q9Y4G8 1499 aa8□□□□□ -1.13
SRSF3-205ENST00000614136 CHMP7Q8WUX9 453 aaPredicted RBP8□□□□□ -1.13
SRSF3-205ENST00000614136 POTEFA5A3E0 1075 aa7.99□□□□□ -1.13
SRSF3-205ENST00000614136 PRXQ9BXM0 1461 aa7.99□□□□□ -1.13
SRSF3-205ENST00000614136 TIE1P35590 1138 aa7.98□□□□□ -1.13
SRSF3-205ENST00000614136 GRIN2BQ13224 1484 aa7.98□□□□□ -1.13
SRSF3-205ENST00000614136 SEC24BO95487 1268 aa7.98□□□□□ -1.13
SRSF3-205ENST00000614136 GOLGA3Q08378 1498 aa7.97□□□□□ -1.13
SRSF3-205ENST00000614136 BMP2KQ9NSY1 1161 aaPredicted RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms