RNA–Protein interactions for RNA: ENST00000614113.4

CAV1-209, Transcript of caveolin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAV1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAV1-209ENST00000614113 ANP32CO43423 234 aa16.69■□□□□ 0.26
CAV1-209ENST00000614113 RRBP1Q9P2E9 1410 aaKnown RBP16.69■□□□□ 0.26
CAV1-209ENST00000614113 PLEKHG5O94827 1062 aa16.68■□□□□ 0.26
CAV1-209ENST00000614113 TOP2BQ02880 1626 aa16.64■□□□□ 0.25
CAV1-209ENST00000614113 IRX6P78412 446 aaPredicted RBP16.64■□□□□ 0.25
CAV1-209ENST00000614113 UBE2Q2Q8WVN8 375 aa16.63■□□□□ 0.25
CAV1-209ENST00000614113 PEG3Q9GZU2 1588 aa16.62■□□□□ 0.25
CAV1-209ENST00000614113 ARHGAP35Q9NRY4 1499 aa16.62■□□□□ 0.25
CAV1-209ENST00000614113 SETD5Q9C0A6 1442 aa16.62■□□□□ 0.25
CAV1-209ENST00000614113 RBM19Q9Y4C8 960 aaKnown RBP16.6■□□□□ 0.25
CAV1-209ENST00000614113 ERICH3Q5RHP9 1530 aa16.59■□□□□ 0.25
CAV1-209ENST00000614113 PHLDB1Q86UU1 1377 aa16.56■□□□□ 0.24
CAV1-209ENST00000614113 PPP1R15AO75807 674 aaPredicted RBP16.56■□□□□ 0.24
CAV1-209ENST00000614113 CUX2O14529 1486 aa16.55■□□□□ 0.24
CAV1-209ENST00000614113 CUX1P39880 1505 aa16.55■□□□□ 0.24
CAV1-209ENST00000614113 WDR97A6NE52 1622 aa16.55■□□□□ 0.24
CAV1-209ENST00000614113 HNRNPUQ00839 825 aaKnown RBP eCLIP16.55■□□□□ 0.24
CAV1-209ENST00000614113 MAPKBP1O60336 1514 aa16.53■□□□□ 0.24
CAV1-209ENST00000614113 TONSLQ96HA7 1378 aa16.53■□□□□ 0.24
CAV1-209ENST00000614113 CARMIL1Q5VZK9 1371 aa16.51■□□□□ 0.23
CAV1-209ENST00000614113 CNGB1Q14028 1251 aaPredicted RBP16.51■□□□□ 0.23
CAV1-209ENST00000614113 IGF1RP08069 1367 aa16.5■□□□□ 0.23
CAV1-209ENST00000614113 CCER2I3L3R5 266 aa16.46■□□□□ 0.23
CAV1-209ENST00000614113 CCDC136Q96JN2 1154 aa16.46■□□□□ 0.23
CAV1-209ENST00000614113 BIVM-ERCC5R4GMW8 1640 aa16.45■□□□□ 0.22
CAV1-209ENST00000614113 LRRC9Q6ZRR7 1453 aa16.44■□□□□ 0.22
CAV1-209ENST00000614113 PODXL2Q9NZ53 605 aa16.43■□□□□ 0.22
CAV1-209ENST00000614113 CHIC2Q9UKJ5 165 aa16.43■□□□□ 0.22
CAV1-209ENST00000614113 CDK11AQ9UQ88 783 aaPredicted RBP16.43■□□□□ 0.22
CAV1-209ENST00000614113 SALL2Q9Y467 1007 aaPredicted RBP16.43■□□□□ 0.22
CAV1-209ENST00000614113 FHOD3Q2V2M9 1422 aa16.42■□□□□ 0.22
CAV1-209ENST00000614113 TIAM1Q13009 1591 aa16.4■□□□□ 0.22
CAV1-209ENST00000614113 TIMELESSQ9UNS1 1208 aa16.39■□□□□ 0.21
CAV1-209ENST00000614113 RRP7BPQ9NSQ0 103 aa16.39■□□□□ 0.21
CAV1-209ENST00000614113 FAM9BQ8IZU0 186 aa16.38■□□□□ 0.21
CAV1-209ENST00000614113 ARID3CA6NKF2 412 aa16.38■□□□□ 0.21
CAV1-209ENST00000614113 PKNOX2Q96KN3 472 aa16.37■□□□□ 0.21
CAV1-209ENST00000614113 FHAD1B1AJZ9 1412 aa16.37■□□□□ 0.21
CAV1-209ENST00000614113 MTUS2Q5JR59 1369 aa16.35■□□□□ 0.21
CAV1-209ENST00000614113 MSH5O43196 834 aa16.35■□□□□ 0.21
CAV1-209ENST00000614113 SENP3-EIF4A1A0A087X0R7 540 aa16.34■□□□□ 0.21
CAV1-209ENST00000614113 CFTRP13569 1480 aa16.34■□□□□ 0.21
CAV1-209ENST00000614113 POLR3GLQ9BT43 218 aa16.34■□□□□ 0.21
CAV1-209ENST00000614113 NCAPD3P42695 1498 aa16.33■□□□□ 0.21
CAV1-209ENST00000614113 HSPA5P11021 654 aaKnown RBP16.31■□□□□ 0.2
CAV1-209ENST00000614113 FGD5Q6ZNL6 1462 aa16.3■□□□□ 0.2
CAV1-209ENST00000614113 FOXD1Q16676 465 aa16.29■□□□□ 0.2
CAV1-209ENST00000614113 B4GALNT3Q6L9W6 998 aa16.29■□□□□ 0.2
CAV1-209ENST00000614113 CCDC184Q52MB2 194 aa16.29■□□□□ 0.2
CAV1-209ENST00000614113 MRS2Q9HD23 443 aa16.26■□□□□ 0.19
CAV1-209ENST00000614113 CCDC18Q5T9S5 1454 aa16.25■□□□□ 0.19
CAV1-209ENST00000614113 EIF4G2P78344 907 aaKnown RBP eCLIP16.25■□□□□ 0.19
CAV1-209ENST00000614113 PCF11O94913 1555 aaKnown RBP16.25■□□□□ 0.19
CAV1-209ENST00000614113 WASHC2AQ641Q2 1341 aa16.24■□□□□ 0.19
CAV1-209ENST00000614113 CADPSQ9ULU8 1353 aa16.24■□□□□ 0.19
CAV1-209ENST00000614113 RAD54L2Q9Y4B4 1467 aa16.23■□□□□ 0.19
CAV1-209ENST00000614113 FGD6Q6ZV73 1430 aa16.22■□□□□ 0.19
CAV1-209ENST00000614113 MAP3K1Q13233 1512 aa16.21■□□□□ 0.19
CAV1-209ENST00000614113 PTPRKQ15262 1439 aa16.2■□□□□ 0.18
CAV1-209ENST00000614113 HMGXB3Q12766 1538 aa16.2■□□□□ 0.18
CAV1-209ENST00000614113 ZNF326Q5BKZ1 582 aaKnown RBP16.2■□□□□ 0.18
CAV1-209ENST00000614113 PPP4R2Q9NY27 417 aa16.2■□□□□ 0.18
CAV1-209ENST00000614113 NBR1Q14596 966 aa16.17■□□□□ 0.18
CAV1-209ENST00000614113 L3MBTL2Q969R5 705 aa16.17■□□□□ 0.18
CAV1-209ENST00000614113 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.17■□□□□ 0.18
CAV1-209ENST00000614113 UACAQ9BZF9 1416 aa16.17■□□□□ 0.18
CAV1-209ENST00000614113 C11orf95C9JLR9 678 aaPredicted RBP16.16■□□□□ 0.18
CAV1-209ENST00000614113 AQRO60306 1485 aaKnown RBP eCLIP16.15■□□□□ 0.18
CAV1-209ENST00000614113 CASKIN1Q8WXD9 1431 aa16.15■□□□□ 0.18
CAV1-209ENST00000614113 FANCIQ9NVI1 1328 aa16.14■□□□□ 0.17
CAV1-209ENST00000614113 TDRD9Q8NDG6 1382 aaKnown RBP16.13■□□□□ 0.17
CAV1-209ENST00000614113 PRKRIP1Q9H875 184 aaPredicted RBP16.13■□□□□ 0.17
CAV1-209ENST00000614113 NAIPQ13075 1403 aa16.12■□□□□ 0.17
CAV1-209ENST00000614113 MPHOSPH9Q99550 1183 aa16.12■□□□□ 0.17
CAV1-209ENST00000614113 FYCO1Q9BQS8 1478 aa16.12■□□□□ 0.17
CAV1-209ENST00000614113 HFM1A2PYH4 1435 aa16.12■□□□□ 0.17
CAV1-209ENST00000614113 FMN1Q68DA7 1419 aa16.12■□□□□ 0.17
CAV1-209ENST00000614113 ERICH6BQ5W0A0 696 aa16.1■□□□□ 0.17
CAV1-209ENST00000614113 FANCD2Q9BXW9 1451 aa16.09■□□□□ 0.17
CAV1-209ENST00000614113 DEKP35659 375 aaKnown RBP16.09■□□□□ 0.17
CAV1-209ENST00000614113 NCOA2Q15596 1464 aa16.08■□□□□ 0.16
CAV1-209ENST00000614113 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.08■□□□□ 0.16
CAV1-209ENST00000614113 MYOM3Q5VTT5 1437 aa16.06■□□□□ 0.16
CAV1-209ENST00000614113 SLC4A1APQ9BWU0 796 aaKnown RBP16.06■□□□□ 0.16
CAV1-209ENST00000614113 NBPF8Q3BBV2 869 aa16.05■□□□□ 0.16
CAV1-209ENST00000614113 CFAP43Q8NDM7 1665 aa16.05■□□□□ 0.16
CAV1-209ENST00000614113 PTPN23Q9H3S7 1636 aa16.03■□□□□ 0.16
CAV1-209ENST00000614113 CNTLNQ9NXG0 1405 aa16.02■□□□□ 0.16
CAV1-209ENST00000614113 CCDC7Q96M83 1385 aa16.02■□□□□ 0.16
CAV1-209ENST00000614113 MYT1LQ9UL68 1186 aa16.01■□□□□ 0.15
CAV1-209ENST00000614113 POLA1P09884 1462 aaPredicted RBP16.01■□□□□ 0.15
CAV1-209ENST00000614113 NOP58Q9Y2X3 529 aaKnown RBP16.01■□□□□ 0.15
CAV1-209ENST00000614113 ZBED9Q6R2W3 1325 aa16■□□□□ 0.15
CAV1-209ENST00000614113 NPM2Q86SE8 214 aaKnown RBP16■□□□□ 0.15
CAV1-209ENST00000614113 PAK3O75914 559 aaPredicted RBP16■□□□□ 0.15
CAV1-209ENST00000614113 KIF7Q2M1P5 1343 aa16■□□□□ 0.15
CAV1-209ENST00000614113 NESP48681 1621 aa15.99■□□□□ 0.15
CAV1-209ENST00000614113 ZNF777Q9ULD5 760 aaPredicted RBP15.99■□□□□ 0.15
CAV1-209ENST00000614113 EFCAB5A4FU69 1503 aa15.98■□□□□ 0.15
CAV1-209ENST00000614113 ANP32AP39687 249 aaKnown RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms