RNA–Protein interactions for RNA: ENST00000613455.4

CPNE9-205, Transcript of copine family member 9, humanhuman

TSL 5 BASIC

Gene CPNE9, Length 1,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-205ENST00000613455 CHD1O14646 1710 aa32.37■■■□□ 2.77
CPNE9-205ENST00000613455 CEP170Q5SW79 1584 aa32.35■■■□□ 2.77
CPNE9-205ENST00000613455 FBLN2P98095 1184 aa32.34■■■□□ 2.77
CPNE9-205ENST00000613455 RANGAP1P46060 587 aaPredicted RBP32.34■■■□□ 2.77
CPNE9-205ENST00000613455 NUP160Q12769 1436 aa32.32■■■□□ 2.76
CPNE9-205ENST00000613455 IQGAP2Q13576 1575 aa32.3■■■□□ 2.76
CPNE9-205ENST00000613455 ARHGAP35Q9NRY4 1499 aa32.28■■■□□ 2.76
CPNE9-205ENST00000613455 KIAA0586Q9BVV6 1533 aa32.27■■■□□ 2.76
CPNE9-205ENST00000613455 ARAP1Q96P48 1450 aa32.22■■■□□ 2.75
CPNE9-205ENST00000613455 EFCAB5A4FU69 1503 aa32.2■■■□□ 2.75
CPNE9-205ENST00000613455 SAMD9Q5K651 1589 aa32.18■■■□□ 2.74
CPNE9-205ENST00000613455 UGGT2Q9NYU1 1516 aa32.15■■■□□ 2.74
CPNE9-205ENST00000613455 VPS8Q8N3P4 1428 aa32.1■■■□□ 2.73
CPNE9-205ENST00000613455 FHOD3Q2V2M9 1422 aa32.05■■■□□ 2.72
CPNE9-205ENST00000613455 P3H3Q8IVL6 736 aa32.02■■■□□ 2.72
CPNE9-205ENST00000613455 CLASP1Q7Z460 1538 aa32.01■■■□□ 2.71
CPNE9-205ENST00000613455 DISP1Q96F81 1524 aa32.01■■■□□ 2.71
CPNE9-205ENST00000613455 KIAA0556O60303 1618 aa31.99■■■□□ 2.71
CPNE9-205ENST00000613455 SHROOM2Q13796 1616 aa31.96■■■□□ 2.71
CPNE9-205ENST00000613455 JPH4Q96JJ6 628 aa31.96■■■□□ 2.71
CPNE9-205ENST00000613455 FMN1Q68DA7 1419 aa31.86■■■□□ 2.69
CPNE9-205ENST00000613455 PCF11O94913 1555 aaKnown RBP31.86■■■□□ 2.69
CPNE9-205ENST00000613455 CARMIL2Q6F5E8 1435 aa31.84■■■□□ 2.69
CPNE9-205ENST00000613455 PRG4Q92954 1404 aaPredicted RBP31.83■■■□□ 2.69
CPNE9-205ENST00000613455 FYCO1Q9BQS8 1478 aa31.77■■■□□ 2.68
CPNE9-205ENST00000613455 CASKIN1Q8WXD9 1431 aa31.77■■■□□ 2.68
CPNE9-205ENST00000613455 OSCARQ8IYS5 282 aa31.77■■■□□ 2.68
CPNE9-205ENST00000613455 ERCC6L2Q5T890 1561 aa31.75■■■□□ 2.67
CPNE9-205ENST00000613455 LRRIQ1Q96JM4 1722 aa31.65■■■□□ 2.66
CPNE9-205ENST00000613455 PPARGC1BQ86YN6 1023 aaKnown RBP31.63■■■□□ 2.65
CPNE9-205ENST00000613455 MAP3K1Q13233 1512 aa31.63■■■□□ 2.65
CPNE9-205ENST00000613455 CFAP43Q8NDM7 1665 aa31.63■■■□□ 2.65
CPNE9-205ENST00000613455 TIAM1Q13009 1591 aa31.63■■■□□ 2.65
CPNE9-205ENST00000613455 APLP2Q06481 763 aa31.63■■■□□ 2.65
CPNE9-205ENST00000613455 HECW1Q76N89 1606 aa31.62■■■□□ 2.65
CPNE9-205ENST00000613455 TTBK1Q5TCY1 1321 aaPredicted RBP31.62■■■□□ 2.65
CPNE9-205ENST00000613455 RAPGEF6Q8TEU7 1601 aa31.62■■■□□ 2.65
CPNE9-205ENST00000613455 PLB1Q6P1J6 1458 aa31.58■■■□□ 2.65
CPNE9-205ENST00000613455 PTPRGP23470 1445 aa31.57■■■□□ 2.64
CPNE9-205ENST00000613455 ATP1B4Q9UN42 357 aaPredicted RBP31.57■■■□□ 2.64
CPNE9-205ENST00000613455 ABCA8O94911 1581 aa31.56■■■□□ 2.64
CPNE9-205ENST00000613455 NUP153P49790 1475 aaKnown RBP31.53■■■□□ 2.64
CPNE9-205ENST00000613455 EPRSP07814 1512 aaKnown RBP31.5■■■□□ 2.63
CPNE9-205ENST00000613455 KANK4Q5T7N3 995 aaPredicted RBP31.5■■■□□ 2.63
CPNE9-205ENST00000613455 CCDC18Q5T9S5 1454 aa31.5■■■□□ 2.63
CPNE9-205ENST00000613455 LRRC9Q6ZRR7 1453 aa31.46■■■□□ 2.63
CPNE9-205ENST00000613455 CDK13Q14004 1512 aaKnown RBP31.45■■■□□ 2.63
CPNE9-205ENST00000613455 UACAQ9BZF9 1416 aa31.41■■■□□ 2.62
CPNE9-205ENST00000613455 ABCC2Q92887 1545 aa31.37■■■□□ 2.61
CPNE9-205ENST00000613455 ARID3CA6NKF2 412 aa31.36■■■□□ 2.61
CPNE9-205ENST00000613455 MAGI3Q5TCQ9 1506 aa31.36■■■□□ 2.61
CPNE9-205ENST00000613455 ARHGEF11O15085 1522 aa31.34■■■□□ 2.61
CPNE9-205ENST00000613455 EHBP1L1Q8N3D4 1523 aa31.31■■■□□ 2.6
CPNE9-205ENST00000613455 UHRF1BP1LA0JNW5 1464 aa31.31■■■□□ 2.6
CPNE9-205ENST00000613455 TRIM26Q12899 539 aaPredicted RBP31.3■■■□□ 2.6
CPNE9-205ENST00000613455 ATP10BO94823 1461 aa31.3■■■□□ 2.6
CPNE9-205ENST00000613455 MTUS2Q5JR59 1369 aa31.29■■■□□ 2.6
CPNE9-205ENST00000613455 ADCY10Q96PN6 1610 aa31.25■■■□□ 2.59
CPNE9-205ENST00000613455 RIMBP3CA6NJZ7 1639 aa31.24■■■□□ 2.59
CPNE9-205ENST00000613455 RIMBP3BA6NNM3 1639 aa31.24■■■□□ 2.59
CPNE9-205ENST00000613455 RIMBP3Q9UFD9 1639 aa31.24■■■□□ 2.59
CPNE9-205ENST00000613455 SUPT6HQ7KZ85 1726 aaKnown RBP31.21■■■□□ 2.59
CPNE9-205ENST00000613455 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.19■■■□□ 2.58
CPNE9-205ENST00000613455 HNRNPUL2Q1KMD3 747 aaKnown RBP31.19■■■□□ 2.58
CPNE9-205ENST00000613455 KDM5BQ9UGL1 1544 aa31.18■■■□□ 2.58
CPNE9-205ENST00000613455 ZCCHC11Q5TAX3 1644 aaKnown RBP31.17■■■□□ 2.58
CPNE9-205ENST00000613455 PCGF6Q9BYE7 350 aa31.17■■■□□ 2.58
CPNE9-205ENST00000613455 TROQ12816 1431 aaPredicted RBP31.16■■■□□ 2.58
CPNE9-205ENST00000613455 CDK11AQ9UQ88 783 aaPredicted RBP31.15■■■□□ 2.58
CPNE9-205ENST00000613455 PHLDB1Q86UU1 1377 aa31.15■■■□□ 2.58
CPNE9-205ENST00000613455 NCOA2Q15596 1464 aa31.15■■■□□ 2.58
CPNE9-205ENST00000613455 RRBP1Q9P2E9 1410 aaKnown RBP31.08■■■□□ 2.57
CPNE9-205ENST00000613455 KIF14Q15058 1648 aa31.07■■■□□ 2.56
CPNE9-205ENST00000613455 PLEKHD1A6NEE1 506 aa31.05■■■□□ 2.56
CPNE9-205ENST00000613455 MYOM3Q5VTT5 1437 aa31■■■□□ 2.55
CPNE9-205ENST00000613455 CCNB3Q8WWL7 1395 aa30.98■■■□□ 2.55
CPNE9-205ENST00000613455 FGD6Q6ZV73 1430 aa30.96■■■□□ 2.55
CPNE9-205ENST00000613455 CYB5RLQ6IPT4 315 aa30.95■■■□□ 2.54
CPNE9-205ENST00000613455 ABCC10Q5T3U5 1492 aa30.94■■■□□ 2.54
CPNE9-205ENST00000613455 WDR7Q9Y4E6 1490 aa30.89■■■□□ 2.54
CPNE9-205ENST00000613455 ITSN2Q9NZM3 1697 aa30.87■■■□□ 2.53
CPNE9-205ENST00000613455 CDC42BPAQ5VT25 1732 aa30.86■■■□□ 2.53
CPNE9-205ENST00000613455 GPATCH8Q9UKJ3 1502 aaKnown RBP30.86■■■□□ 2.53
CPNE9-205ENST00000613455 ASXL2Q76L83 1435 aa30.86■■■□□ 2.53
CPNE9-205ENST00000613455 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.85■■■□□ 2.53
CPNE9-205ENST00000613455 PTPN23Q9H3S7 1636 aa30.85■■■□□ 2.53
CPNE9-205ENST00000613455 TTC37Q6PGP7 1564 aa30.85■■■□□ 2.53
CPNE9-205ENST00000613455 MIA2Q96PC5 1412 aa30.84■■■□□ 2.53
CPNE9-205ENST00000613455 NPM1P06748 294 aaKnown RBP eCLIP30.84■■■□□ 2.53
CPNE9-205ENST00000613455 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.82■■■□□ 2.52
CPNE9-205ENST00000613455 TCOF1Q13428 1488 aaKnown RBP30.81■■■□□ 2.52
CPNE9-205ENST00000613455 PREX2Q70Z35 1606 aa30.77■■■□□ 2.52
CPNE9-205ENST00000613455 FAM50AQ14320 339 aaKnown RBP30.77■■■□□ 2.52
CPNE9-205ENST00000613455 KCNH8Q96L42 1107 aa30.77■■■□□ 2.52
CPNE9-205ENST00000613455 MAPKBP1O60336 1514 aa30.76■■■□□ 2.52
CPNE9-205ENST00000613455 MYO5CQ9NQX4 1742 aa30.74■■■□□ 2.51
CPNE9-205ENST00000613455 CDC42BPBQ9Y5S2 1711 aa30.74■■■□□ 2.51
CPNE9-205ENST00000613455 ABCA9Q8IUA7 1624 aa30.71■■■□□ 2.51
CPNE9-205ENST00000613455 CFDP1Q9UEE9 299 aaPredicted RBP30.7■■■□□ 2.5
CPNE9-205ENST00000613455 CAMSAP2Q08AD1 1489 aa30.67■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms