RNA–Protein interactions for RNA: ENST00000613104.1

ATF3-210, Transcript of activating transcription factor 3, humanhuman

TSL 1 (best) BASIC

Gene ATF3, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-210ENST00000613104 RAPGEF2Q9Y4G8 1499 aa15.4■□□□□ 0.06
ATF3-210ENST00000613104 KIF21BO75037 1637 aa15.37■□□□□ 0.05
ATF3-210ENST00000613104 FBLN2P98095 1184 aa15.37■□□□□ 0.05
ATF3-210ENST00000613104 NUP160Q12769 1436 aa15.34■□□□□ 0.05
ATF3-210ENST00000613104 CEP170Q5SW79 1584 aa15.33■□□□□ 0.05
ATF3-210ENST00000613104 OSCARQ8IYS5 282 aa15.32■□□□□ 0.04
ATF3-210ENST00000613104 CLASP1Q7Z460 1538 aa15.29■□□□□ 0.04
ATF3-210ENST00000613104 GOLGA3Q08378 1498 aa15.27■□□□□ 0.04
ATF3-210ENST00000613104 KIAA0586Q9BVV6 1533 aa15.26■□□□□ 0.03
ATF3-210ENST00000613104 CTTNBP2Q8WZ74 1663 aa15.25■□□□□ 0.03
ATF3-210ENST00000613104 SHROOM2Q13796 1616 aa15.21■□□□□ 0.03
ATF3-210ENST00000613104 IQGAP2Q13576 1575 aa15.21■□□□□ 0.03
ATF3-210ENST00000613104 UBTFP17480 764 aaKnown RBP15.16■□□□□ 0.02
ATF3-210ENST00000613104 JPH4Q96JJ6 628 aa15.16■□□□□ 0.02
ATF3-210ENST00000613104 EHMT2Q96KQ7 1210 aa15.16■□□□□ 0.02
ATF3-210ENST00000613104 UGGT2Q9NYU1 1516 aa15.16■□□□□ 0.02
ATF3-210ENST00000613104 TNIKQ9UKE5 1360 aa15.14■□□□□ 0.01
ATF3-210ENST00000613104 LOC105371045A0A1W2PR82 267 aa15.13■□□□□ 0.01
ATF3-210ENST00000613104 PRG4Q92954 1404 aaPredicted RBP15.11■□□□□ 0.01
ATF3-210ENST00000613104 ARHGEF11O15085 1522 aa15.09■□□□□ 0.01
ATF3-210ENST00000613104 DISP1Q96F81 1524 aa15.09■□□□□ 0.01
ATF3-210ENST00000613104 ERCC6L2Q5T890 1561 aa15.09■□□□□ 0.01
ATF3-210ENST00000613104 KCNA4P22459 653 aa15.08■□□□□ 0
ATF3-210ENST00000613104 SAMD9Q5K651 1589 aa15.07■□□□□ 0
ATF3-210ENST00000613104 RIMBP3CA6NJZ7 1639 aa15.07■□□□□ 0
ATF3-210ENST00000613104 RIMBP3BA6NNM3 1639 aa15.07■□□□□ 0
ATF3-210ENST00000613104 KIAA0556O60303 1618 aa15.07■□□□□ 0
ATF3-210ENST00000613104 RIMBP3Q9UFD9 1639 aa15.07■□□□□ 0
ATF3-210ENST00000613104 PPP4R3CPQ6ZMV5 832 aa15.06■□□□□ 0
ATF3-210ENST00000613104 CARMIL2Q6F5E8 1435 aa15.06■□□□□ 0
ATF3-210ENST00000613104 EFCAB5A4FU69 1503 aa15.05■□□□□ -0
ATF3-210ENST00000613104 MSH5O43196 834 aa15.02■□□□□ -0
ATF3-210ENST00000613104 ARHGAP35Q9NRY4 1499 aa15.01□□□□□ -0.01
ATF3-210ENST00000613104 RANGAP1P46060 587 aaPredicted RBP15□□□□□ -0.01
ATF3-210ENST00000613104 ARAP1Q96P48 1450 aa15□□□□□ -0.01
ATF3-210ENST00000613104 CLIP1P30622 1438 aa15□□□□□ -0.01
ATF3-210ENST00000613104 CEP162Q5TB80 1403 aa15□□□□□ -0.01
ATF3-210ENST00000613104 PTPRGP23470 1445 aa14.96□□□□□ -0.01
ATF3-210ENST00000613104 FHOD3Q2V2M9 1422 aa14.96□□□□□ -0.01
ATF3-210ENST00000613104 P3H3Q8IVL6 736 aa14.96□□□□□ -0.01
ATF3-210ENST00000613104 TRHP20396 242 aaPredicted RBP14.9□□□□□ -0.02
ATF3-210ENST00000613104 ABCA8O94911 1581 aa14.9□□□□□ -0.02
ATF3-210ENST00000613104 CYB5RLQ6IPT4 315 aa14.89□□□□□ -0.03
ATF3-210ENST00000613104 FMN1Q68DA7 1419 aa14.89□□□□□ -0.03
ATF3-210ENST00000613104 UACAQ9BZF9 1416 aa14.88□□□□□ -0.03
ATF3-210ENST00000613104 TTBK1Q5TCY1 1321 aaPredicted RBP14.88□□□□□ -0.03
ATF3-210ENST00000613104 UHRF1BP1LA0JNW5 1464 aa14.88□□□□□ -0.03
ATF3-210ENST00000613104 PLB1Q6P1J6 1458 aa14.88□□□□□ -0.03
ATF3-210ENST00000613104 NCBP3Q53F19 620 aaKnown RBP14.87□□□□□ -0.03
ATF3-210ENST00000613104 ABCC2Q92887 1545 aa14.87□□□□□ -0.03
ATF3-210ENST00000613104 RAPGEF6Q8TEU7 1601 aa14.86□□□□□ -0.03
ATF3-210ENST00000613104 ADCY10Q96PN6 1610 aa14.86□□□□□ -0.03
ATF3-210ENST00000613104 VPS8Q8N3P4 1428 aa14.82□□□□□ -0.04
ATF3-210ENST00000613104 PCF11O94913 1555 aaKnown RBP14.81□□□□□ -0.04
ATF3-210ENST00000613104 CASKIN1Q8WXD9 1431 aa14.81□□□□□ -0.04
ATF3-210ENST00000613104 HECW1Q76N89 1606 aa14.81□□□□□ -0.04
ATF3-210ENST00000613104 SCAF1Q9H7N4 1312 aaKnown RBP14.8□□□□□ -0.04
ATF3-210ENST00000613104 NUP153P49790 1475 aaKnown RBP14.8□□□□□ -0.04
ATF3-210ENST00000613104 KDM5BQ9UGL1 1544 aa14.8□□□□□ -0.04
ATF3-210ENST00000613104 FYCO1Q9BQS8 1478 aa14.79□□□□□ -0.04
ATF3-210ENST00000613104 LRRIQ1Q96JM4 1722 aa14.77□□□□□ -0.05
ATF3-210ENST00000613104 ZCCHC11Q5TAX3 1644 aaKnown RBP14.77□□□□□ -0.05
ATF3-210ENST00000613104 ATP10BO94823 1461 aa14.76□□□□□ -0.05
ATF3-210ENST00000613104 EPRSP07814 1512 aaKnown RBP14.75□□□□□ -0.05
ATF3-210ENST00000613104 NPM1P06748 294 aaKnown RBP eCLIP14.73□□□□□ -0.05
ATF3-210ENST00000613104 CCDC18Q5T9S5 1454 aa14.72□□□□□ -0.05
ATF3-210ENST00000613104 MAPKBP1O60336 1514 aa14.71□□□□□ -0.05
ATF3-210ENST00000613104 CDK13Q14004 1512 aaKnown RBP14.71□□□□□ -0.05
ATF3-210ENST00000613104 ATP1B4Q9UN42 357 aaPredicted RBP14.71□□□□□ -0.05
ATF3-210ENST00000613104 ARID3CA6NKF2 412 aa14.69□□□□□ -0.06
ATF3-210ENST00000613104 MAP3K1Q13233 1512 aa14.68□□□□□ -0.06
ATF3-210ENST00000613104 CFAP43Q8NDM7 1665 aa14.68□□□□□ -0.06
ATF3-210ENST00000613104 ASXL2Q76L83 1435 aa14.67□□□□□ -0.06
ATF3-210ENST00000613104 TIAM1Q13009 1591 aa14.66□□□□□ -0.06
ATF3-210ENST00000613104 WDR7Q9Y4E6 1490 aa14.65□□□□□ -0.06
ATF3-210ENST00000613104 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.65□□□□□ -0.06
ATF3-210ENST00000613104 HNRNPUL2Q1KMD3 747 aaKnown RBP14.65□□□□□ -0.06
ATF3-210ENST00000613104 MAGI3Q5TCQ9 1506 aa14.63□□□□□ -0.07
ATF3-210ENST00000613104 PLEKHD1A6NEE1 506 aa14.63□□□□□ -0.07
ATF3-210ENST00000613104 CDK11AQ9UQ88 783 aaPredicted RBP14.63□□□□□ -0.07
ATF3-210ENST00000613104 TROQ12816 1431 aaPredicted RBP14.62□□□□□ -0.07
ATF3-210ENST00000613104 ABCC10Q5T3U5 1492 aa14.61□□□□□ -0.07
ATF3-210ENST00000613104 DIP2BQ9P265 1576 aa14.6□□□□□ -0.07
ATF3-210ENST00000613104 APLP2Q06481 763 aa14.59□□□□□ -0.07
ATF3-210ENST00000613104 EHBP1L1Q8N3D4 1523 aa14.59□□□□□ -0.07
ATF3-210ENST00000613104 GLI2P10070 1586 aa14.59□□□□□ -0.07
ATF3-210ENST00000613104 LRRC9Q6ZRR7 1453 aa14.58□□□□□ -0.08
ATF3-210ENST00000613104 KIF13AQ9H1H9 1805 aa14.58□□□□□ -0.08
ATF3-210ENST00000613104 CNKSR2Q8WXI2 1034 aa14.58□□□□□ -0.08
ATF3-210ENST00000613104 MTUS2Q5JR59 1369 aa14.57□□□□□ -0.08
ATF3-210ENST00000613104 KANK4Q5T7N3 995 aaPredicted RBP14.56□□□□□ -0.08
ATF3-210ENST00000613104 KIF14Q15058 1648 aa14.55□□□□□ -0.08
ATF3-210ENST00000613104 ABCA9Q8IUA7 1624 aa14.55□□□□□ -0.08
ATF3-210ENST00000613104 KCNH8Q96L42 1107 aa14.55□□□□□ -0.08
ATF3-210ENST00000613104 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.54□□□□□ -0.08
ATF3-210ENST00000613104 SUPT6HQ7KZ85 1726 aaKnown RBP14.53□□□□□ -0.08
ATF3-210ENST00000613104 MAP3K4Q9Y6R4 1608 aa14.52□□□□□ -0.08
ATF3-210ENST00000613104 NPM3O75607 178 aaKnown RBP14.52□□□□□ -0.09
ATF3-210ENST00000613104 FAM69CQ0P6D2 419 aa14.52□□□□□ -0.09
ATF3-210ENST00000613104 TTC37Q6PGP7 1564 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms