RNA–Protein interactions for RNA: ENST00000612553.4

PMPCA-207, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 2

Gene PMPCA, Length 1,174 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-207ENST00000612553 PRG4Q92954 1404 aaPredicted RBP35.91■■■■□ 3.34
PMPCA-207ENST00000612553 CUL7Q14999 1698 aa35.91■■■■□ 3.34
PMPCA-207ENST00000612553 KIAA0586Q9BVV6 1533 aa35.77■■■■□ 3.32
PMPCA-207ENST00000612553 CARMIL1Q5VZK9 1371 aa35.74■■■■□ 3.31
PMPCA-207ENST00000612553 NPM1P06748 294 aaKnown RBP eCLIP35.49■■■■□ 3.27
PMPCA-207ENST00000612553 IQGAP2Q13576 1575 aa35.46■■■■□ 3.27
PMPCA-207ENST00000612553 RAPGEF2Q9Y4G8 1499 aa35.45■■■■□ 3.27
PMPCA-207ENST00000612553 ADCY10Q96PN6 1610 aa35.45■■■■□ 3.27
PMPCA-207ENST00000612553 CARMIL2Q6F5E8 1435 aa35.42■■■■□ 3.26
PMPCA-207ENST00000612553 KIF13AQ9H1H9 1805 aa35.42■■■■□ 3.26
PMPCA-207ENST00000612553 PTPRGP23470 1445 aa35.39■■■■□ 3.26
PMPCA-207ENST00000612553 MAPKBP1O60336 1514 aa35.38■■■■□ 3.25
PMPCA-207ENST00000612553 TNIKQ9UKE5 1360 aa35.35■■■■□ 3.25
PMPCA-207ENST00000612553 ABCC10Q5T3U5 1492 aa35.31■■■■□ 3.24
PMPCA-207ENST00000612553 TTBK1Q5TCY1 1321 aaPredicted RBP35.3■■■■□ 3.24
PMPCA-207ENST00000612553 FAM69CQ0P6D2 419 aa35.27■■■■□ 3.24
PMPCA-207ENST00000612553 DISP1Q96F81 1524 aa35.26■■■■□ 3.23
PMPCA-207ENST00000612553 UGGT2Q9NYU1 1516 aa35.24■■■■□ 3.23
PMPCA-207ENST00000612553 DIP2BQ9P265 1576 aa35.22■■■■□ 3.23
PMPCA-207ENST00000612553 ABCC2Q92887 1545 aa35.16■■■■□ 3.22
PMPCA-207ENST00000612553 CTTNBP2Q8WZ74 1663 aa35.15■■■■□ 3.22
PMPCA-207ENST00000612553 UHRF1BP1LA0JNW5 1464 aa35.14■■■■□ 3.22
PMPCA-207ENST00000612553 PRXQ9BXM0 1461 aa35.13■■■■□ 3.21
PMPCA-207ENST00000612553 UACAQ9BZF9 1416 aa35.13■■■■□ 3.21
PMPCA-207ENST00000612553 KIAA0556O60303 1618 aa35.13■■■■□ 3.21
PMPCA-207ENST00000612553 ASXL2Q76L83 1435 aa35.01■■■■□ 3.2
PMPCA-207ENST00000612553 PLB1Q6P1J6 1458 aa35.01■■■■□ 3.19
PMPCA-207ENST00000612553 GOLGA3Q08378 1498 aa35■■■■□ 3.19
PMPCA-207ENST00000612553 KDM5BQ9UGL1 1544 aa34.97■■■■□ 3.19
PMPCA-207ENST00000612553 TSPOAP1O95153 1857 aa34.97■■■■□ 3.19
PMPCA-207ENST00000612553 CSRNP3Q8WYN3 585 aa34.94■■■■□ 3.18
PMPCA-207ENST00000612553 AEBP2Q6ZN18 517 aaPredicted RBP34.91■■■■□ 3.18
PMPCA-207ENST00000612553 ZCCHC11Q5TAX3 1644 aaKnown RBP34.9■■■■□ 3.18
PMPCA-207ENST00000612553 GLI2P10070 1586 aa34.9■■■■□ 3.18
PMPCA-207ENST00000612553 KDM6BO15054 1643 aa34.87■■■■□ 3.17
PMPCA-207ENST00000612553 EEA1Q15075 1411 aa34.85■■■■□ 3.17
PMPCA-207ENST00000612553 EPRSP07814 1512 aaKnown RBP34.8■■■■□ 3.16
PMPCA-207ENST00000612553 ABCA8O94911 1581 aa34.79■■■■□ 3.16
PMPCA-207ENST00000612553 PPRC1Q5VV67 1664 aaKnown RBP34.76■■■■□ 3.15
PMPCA-207ENST00000612553 FAM9AQ8IZU1 332 aaPredicted RBP34.73■■■■□ 3.15
PMPCA-207ENST00000612553 WDR7Q9Y4E6 1490 aa34.71■■■■□ 3.15
PMPCA-207ENST00000612553 MAP3K4Q9Y6R4 1608 aa34.71■■■■□ 3.15
PMPCA-207ENST00000612553 P3H3Q8IVL6 736 aa34.69■■■■□ 3.14
PMPCA-207ENST00000612553 SAMD9Q5K651 1589 aa34.66■■■■□ 3.14
PMPCA-207ENST00000612553 TEX14Q8IWB6 1497 aa34.62■■■■□ 3.13
PMPCA-207ENST00000612553 KCNH8Q96L42 1107 aa34.55■■■■□ 3.12
PMPCA-207ENST00000612553 KIF21BO75037 1637 aa34.55■■■■□ 3.12
PMPCA-207ENST00000612553 CFAP43Q8NDM7 1665 aa34.51■■■■□ 3.12
PMPCA-207ENST00000612553 ATP10BO94823 1461 aa34.5■■■■□ 3.11
PMPCA-207ENST00000612553 ARID3CA6NKF2 412 aa34.49■■■■□ 3.11
PMPCA-207ENST00000612553 RANGAP1P46060 587 aaPredicted RBP34.49■■■■□ 3.11
PMPCA-207ENST00000612553 CHIC1Q5VXU3 224 aa34.49■■■■□ 3.11
PMPCA-207ENST00000612553 COL17A1Q9UMD9 1497 aaPredicted RBP34.49■■■■□ 3.11
PMPCA-207ENST00000612553 CD109Q6YHK3 1445 aa34.48■■■■□ 3.11
PMPCA-207ENST00000612553 RAPGEF6Q8TEU7 1601 aa34.48■■■■□ 3.11
PMPCA-207ENST00000612553 MAGI3Q5TCQ9 1506 aa34.45■■■■□ 3.11
PMPCA-207ENST00000612553 FHOD3Q2V2M9 1422 aa34.41■■■■□ 3.1
PMPCA-207ENST00000612553 KDM4FA0A1W2PPD8 638 aa34.38■■■■□ 3.09
PMPCA-207ENST00000612553 EFCAB5A4FU69 1503 aa34.37■■■■□ 3.09
PMPCA-207ENST00000612553 NUP153P49790 1475 aaKnown RBP34.33■■■■□ 3.09
PMPCA-207ENST00000612553 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.33■■■■□ 3.09
PMPCA-207ENST00000612553 HNRNPUL2Q1KMD3 747 aaKnown RBP34.33■■■■□ 3.09
PMPCA-207ENST00000612553 UBTFP17480 764 aaKnown RBP34.29■■■■□ 3.08
PMPCA-207ENST00000612553 ABCA9Q8IUA7 1624 aa34.29■■■■□ 3.08
PMPCA-207ENST00000612553 EHMT2Q96KQ7 1210 aa34.26■■■■□ 3.08
PMPCA-207ENST00000612553 ADGRL1O94910 1474 aa34.18■■■■□ 3.06
PMPCA-207ENST00000612553 ARAP3Q8WWN8 1544 aa34.18■■■■□ 3.06
PMPCA-207ENST00000612553 PLEKHD1A6NEE1 506 aa34.17■■■■□ 3.06
PMPCA-207ENST00000612553 PHLDB1Q86UU1 1377 aa34.16■■■■□ 3.06
PMPCA-207ENST00000612553 NEO1Q92859 1461 aa34.09■■■■□ 3.05
PMPCA-207ENST00000612553 ARHGAP35Q9NRY4 1499 aa34.07■■■■□ 3.05
PMPCA-207ENST00000612553 FMN1Q68DA7 1419 aa34.07■■■■□ 3.04
PMPCA-207ENST00000612553 CDK13Q14004 1512 aaKnown RBP34.02■■■■□ 3.04
PMPCA-207ENST00000612553 HECW1Q76N89 1606 aa33.98■■■■□ 3.03
PMPCA-207ENST00000612553 ATP1B4Q9UN42 357 aaPredicted RBP33.98■■■■□ 3.03
PMPCA-207ENST00000612553 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.98■■■■□ 3.03
PMPCA-207ENST00000612553 RAPGEF3O95398 923 aa33.96■■■■□ 3.03
PMPCA-207ENST00000612553 TTC37Q6PGP7 1564 aa33.93■■■■□ 3.02
PMPCA-207ENST00000612553 CFAP74Q9C0B2 1584 aa33.9■■■■□ 3.02
PMPCA-207ENST00000612553 FANCAO15360 1455 aa33.89■■■■□ 3.02
PMPCA-207ENST00000612553 CDK11AQ9UQ88 783 aaPredicted RBP33.88■■■■□ 3.01
PMPCA-207ENST00000612553 FRMPD1Q5SYB0 1578 aa33.88■■■■□ 3.01
PMPCA-207ENST00000612553 AKNAQ7Z591 1439 aa33.87■■■■□ 3.01
PMPCA-207ENST00000612553 DENND4BO75064 1496 aaPredicted RBP33.84■■■■□ 3.01
PMPCA-207ENST00000612553 RICTORQ6R327 1708 aa33.8■■■■□ 3
PMPCA-207ENST00000612553 PLCH2O75038 1416 aa33.79■■■■□ 3
PMPCA-207ENST00000612553 LRRIQ1Q96JM4 1722 aa33.76■■■□□ 2.99
PMPCA-207ENST00000612553 TROQ12816 1431 aaPredicted RBP33.74■■■□□ 2.99
PMPCA-207ENST00000612553 KIF14Q15058 1648 aa33.72■■■□□ 2.99
PMPCA-207ENST00000612553 MYO5CQ9NQX4 1742 aa33.72■■■□□ 2.99
PMPCA-207ENST00000612553 CASKIN1Q8WXD9 1431 aa33.71■■■□□ 2.99
PMPCA-207ENST00000612553 CLIP1P30622 1438 aa33.7■■■□□ 2.99
PMPCA-207ENST00000612553 ARHGEF40Q8TER5 1519 aa33.7■■■□□ 2.99
PMPCA-207ENST00000612553 PCF11O94913 1555 aaKnown RBP33.69■■■□□ 2.98
PMPCA-207ENST00000612553 ZMYM4Q5VZL5 1548 aa33.68■■■□□ 2.98
PMPCA-207ENST00000612553 EFCAB2Q5VUJ9 269 aa33.67■■■□□ 2.98
PMPCA-207ENST00000612553 ARID4BQ4LE39 1312 aaPredicted RBP33.67■■■□□ 2.98
PMPCA-207ENST00000612553 CCDC18Q5T9S5 1454 aa33.67■■■□□ 2.98
PMPCA-207ENST00000612553 ADAMTSL3P82987 1691 aa33.67■■■□□ 2.98
PMPCA-207ENST00000612553 SCAPERQ9BY12 1400 aa33.66■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 154 ms