RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 IGF1RP08069 1367 aa31.08■■■□□ 2.57
SSBP1-215ENST00000612337 CUL7Q14999 1698 aa31.03■■■□□ 2.56
SSBP1-215ENST00000612337 KIAA0586Q9BVV6 1533 aa30.97■■■□□ 2.55
SSBP1-215ENST00000612337 CARMIL1Q5VZK9 1371 aa30.88■■■□□ 2.53
SSBP1-215ENST00000612337 KIF13AQ9H1H9 1805 aa30.82■■■□□ 2.52
SSBP1-215ENST00000612337 NPM1P06748 294 aaKnown RBP eCLIP30.78■■■□□ 2.52
SSBP1-215ENST00000612337 ADCY10Q96PN6 1610 aa30.77■■■□□ 2.52
SSBP1-215ENST00000612337 MAPKBP1O60336 1514 aa30.75■■■□□ 2.51
SSBP1-215ENST00000612337 ABCC10Q5T3U5 1492 aa30.71■■■□□ 2.51
SSBP1-215ENST00000612337 IQGAP2Q13576 1575 aa30.66■■■□□ 2.5
SSBP1-215ENST00000612337 PTPRGP23470 1445 aa30.66■■■□□ 2.5
SSBP1-215ENST00000612337 FAM69CQ0P6D2 419 aa30.66■■■□□ 2.5
SSBP1-215ENST00000612337 CARMIL2Q6F5E8 1435 aa30.65■■■□□ 2.5
SSBP1-215ENST00000612337 DIP2BQ9P265 1576 aa30.62■■■□□ 2.49
SSBP1-215ENST00000612337 TNIKQ9UKE5 1360 aa30.62■■■□□ 2.49
SSBP1-215ENST00000612337 RAPGEF2Q9Y4G8 1499 aa30.6■■■□□ 2.49
SSBP1-215ENST00000612337 AEBP2Q6ZN18 517 aaPredicted RBP30.59■■■□□ 2.49
SSBP1-215ENST00000612337 TTBK1Q5TCY1 1321 aaPredicted RBP30.54■■■□□ 2.48
SSBP1-215ENST00000612337 DISP1Q96F81 1524 aa30.52■■■□□ 2.48
SSBP1-215ENST00000612337 ABCC2Q92887 1545 aa30.5■■■□□ 2.47
SSBP1-215ENST00000612337 UGGT2Q9NYU1 1516 aa30.49■■■□□ 2.47
SSBP1-215ENST00000612337 UHRF1BP1LA0JNW5 1464 aa30.46■■■□□ 2.47
SSBP1-215ENST00000612337 UACAQ9BZF9 1416 aa30.44■■■□□ 2.46
SSBP1-215ENST00000612337 KIAA0556O60303 1618 aa30.39■■■□□ 2.46
SSBP1-215ENST00000612337 PLB1Q6P1J6 1458 aa30.38■■■□□ 2.45
SSBP1-215ENST00000612337 TSPOAP1O95153 1857 aa30.38■■■□□ 2.45
SSBP1-215ENST00000612337 ASXL2Q76L83 1435 aa30.38■■■□□ 2.45
SSBP1-215ENST00000612337 CTTNBP2Q8WZ74 1663 aa30.34■■■□□ 2.45
SSBP1-215ENST00000612337 KDM6BO15054 1643 aa30.34■■■□□ 2.45
SSBP1-215ENST00000612337 KDM5BQ9UGL1 1544 aa30.32■■■□□ 2.44
SSBP1-215ENST00000612337 GLI2P10070 1586 aa30.31■■■□□ 2.44
SSBP1-215ENST00000612337 PRXQ9BXM0 1461 aa30.31■■■□□ 2.44
SSBP1-215ENST00000612337 GOLGA3Q08378 1498 aa30.25■■■□□ 2.43
SSBP1-215ENST00000612337 ZCCHC11Q5TAX3 1644 aaKnown RBP30.24■■■□□ 2.43
SSBP1-215ENST00000612337 PPRC1Q5VV67 1664 aaKnown RBP30.21■■■□□ 2.43
SSBP1-215ENST00000612337 EPRSP07814 1512 aaKnown RBP30.21■■■□□ 2.43
SSBP1-215ENST00000612337 MAP3K4Q9Y6R4 1608 aa30.14■■■□□ 2.41
SSBP1-215ENST00000612337 ABCA8O94911 1581 aa30.11■■■□□ 2.41
SSBP1-215ENST00000612337 WDR7Q9Y4E6 1490 aa30.1■■■□□ 2.41
SSBP1-215ENST00000612337 CSRNP3Q8WYN3 585 aa30.06■■■□□ 2.4
SSBP1-215ENST00000612337 TEX14Q8IWB6 1497 aa30.06■■■□□ 2.4
SSBP1-215ENST00000612337 KDM4FA0A1W2PPD8 638 aa30.01■■■□□ 2.39
SSBP1-215ENST00000612337 COL17A1Q9UMD9 1497 aaPredicted RBP29.99■■■□□ 2.39
SSBP1-215ENST00000612337 EEA1Q15075 1411 aa29.96■■■□□ 2.39
SSBP1-215ENST00000612337 FAM9AQ8IZU1 332 aaPredicted RBP29.96■■■□□ 2.39
SSBP1-215ENST00000612337 P3H3Q8IVL6 736 aa29.94■■■□□ 2.38
SSBP1-215ENST00000612337 SAMD9Q5K651 1589 aa29.93■■■□□ 2.38
SSBP1-215ENST00000612337 CFAP43Q8NDM7 1665 aa29.92■■■□□ 2.38
SSBP1-215ENST00000612337 KCNH8Q96L42 1107 aa29.92■■■□□ 2.38
SSBP1-215ENST00000612337 CD109Q6YHK3 1445 aa29.91■■■□□ 2.38
SSBP1-215ENST00000612337 MAGI3Q5TCQ9 1506 aa29.9■■■□□ 2.38
SSBP1-215ENST00000612337 ATP10BO94823 1461 aa29.86■■■□□ 2.37
SSBP1-215ENST00000612337 ARID3CA6NKF2 412 aa29.82■■■□□ 2.36
SSBP1-215ENST00000612337 RAPGEF6Q8TEU7 1601 aa29.79■■■□□ 2.36
SSBP1-215ENST00000612337 ADGRL1O94910 1474 aa29.79■■■□□ 2.36
SSBP1-215ENST00000612337 KIF21BO75037 1637 aa29.72■■■□□ 2.35
SSBP1-215ENST00000612337 RANGAP1P46060 587 aaPredicted RBP29.71■■■□□ 2.35
SSBP1-215ENST00000612337 FHOD3Q2V2M9 1422 aa29.71■■■□□ 2.35
SSBP1-215ENST00000612337 ABCA9Q8IUA7 1624 aa29.7■■■□□ 2.34
SSBP1-215ENST00000612337 NUP153P49790 1475 aaKnown RBP29.68■■■□□ 2.34
SSBP1-215ENST00000612337 ARAP3Q8WWN8 1544 aa29.66■■■□□ 2.34
SSBP1-215ENST00000612337 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.65■■■□□ 2.34
SSBP1-215ENST00000612337 HNRNPUL2Q1KMD3 747 aaKnown RBP29.65■■■□□ 2.34
SSBP1-215ENST00000612337 EFCAB5A4FU69 1503 aa29.64■■■□□ 2.34
SSBP1-215ENST00000612337 PHLDB1Q86UU1 1377 aa29.62■■■□□ 2.33
SSBP1-215ENST00000612337 CHIC1Q5VXU3 224 aa29.58■■■□□ 2.33
SSBP1-215ENST00000612337 NEO1Q92859 1461 aa29.55■■■□□ 2.32
SSBP1-215ENST00000612337 PLEKHD1A6NEE1 506 aa29.52■■■□□ 2.32
SSBP1-215ENST00000612337 UBTFP17480 764 aaKnown RBP29.47■■■□□ 2.31
SSBP1-215ENST00000612337 RAPGEF3O95398 923 aa29.46■■■□□ 2.31
SSBP1-215ENST00000612337 EHMT2Q96KQ7 1210 aa29.43■■■□□ 2.3
SSBP1-215ENST00000612337 FRMPD1Q5SYB0 1578 aa29.41■■■□□ 2.3
SSBP1-215ENST00000612337 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.4■■■□□ 2.32e-6■□□□□ 8.3
SSBP1-215ENST00000612337 CDK13Q14004 1512 aaKnown RBP29.39■■■□□ 2.3
SSBP1-215ENST00000612337 FMN1Q68DA7 1419 aa29.37■■■□□ 2.29
SSBP1-215ENST00000612337 ARHGAP35Q9NRY4 1499 aa29.37■■■□□ 2.29
SSBP1-215ENST00000612337 TTC37Q6PGP7 1564 aa29.36■■■□□ 2.29
SSBP1-215ENST00000612337 HECW2Q9P2P5 1572 aa29.36■■■□□ 2.29
SSBP1-215ENST00000612337 CFAP74Q9C0B2 1584 aa29.35■■■□□ 2.29
SSBP1-215ENST00000612337 AKNAQ7Z591 1439 aa29.35■■■□□ 2.29
SSBP1-215ENST00000612337 FANCAO15360 1455 aa29.35■■■□□ 2.29
SSBP1-215ENST00000612337 DENND4BO75064 1496 aaPredicted RBP29.33■■■□□ 2.29
SSBP1-215ENST00000612337 HECW1Q76N89 1606 aa29.32■■■□□ 2.28
SSBP1-215ENST00000612337 RICTORQ6R327 1708 aa29.31■■■□□ 2.28
SSBP1-215ENST00000612337 ADAMTSL3P82987 1691 aa29.29■■■□□ 2.28
SSBP1-215ENST00000612337 ATP1B4Q9UN42 357 aaPredicted RBP29.27■■■□□ 2.28
SSBP1-215ENST00000612337 ARHGEF40Q8TER5 1519 aa29.26■■■□□ 2.27
SSBP1-215ENST00000612337 BCORL1Q5H9F3 1711 aa29.23■■■□□ 2.27
SSBP1-215ENST00000612337 PLCH2O75038 1416 aa29.23■■■□□ 2.27
SSBP1-215ENST00000612337 CDK11AQ9UQ88 783 aaPredicted RBP29.22■■■□□ 2.27
SSBP1-215ENST00000612337 PTPRMP28827 1452 aa29.22■■■□□ 2.27
SSBP1-215ENST00000612337 ARID4BQ4LE39 1312 aaPredicted RBP29.21■■■□□ 2.27
SSBP1-215ENST00000612337 ZMYM4Q5VZL5 1548 aa29.21■■■□□ 2.27
SSBP1-215ENST00000612337 MADDQ8WXG6 1647 aa29.15■■■□□ 2.26
SSBP1-215ENST00000612337 MAGI2Q86UL8 1455 aa29.15■■■□□ 2.26
SSBP1-215ENST00000612337 MYO5CQ9NQX4 1742 aa29.14■■■□□ 2.26
SSBP1-215ENST00000612337 TROQ12816 1431 aaPredicted RBP29.14■■■□□ 2.26
SSBP1-215ENST00000612337 SCAPERQ9BY12 1400 aa29.14■■■□□ 2.26
SSBP1-215ENST00000612337 ZFYVE16Q7Z3T8 1539 aa29.14■■■□□ 2.25
SSBP1-215ENST00000612337 KIF14Q15058 1648 aa29.13■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms