RNA–Protein interactions for RNA: ENST00000611723.1

CLTCL1-207, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-207ENST00000611723 SYNJ2O15056 1496 aa26.06■■□□□ 1.76
CLTCL1-207ENST00000611723 GOLGA3Q08378 1498 aa26.04■■□□□ 1.76
CLTCL1-207ENST00000611723 LOC105371045A0A1W2PR82 267 aa26.03■■□□□ 1.76
CLTCL1-207ENST00000611723 CHMP7Q8WUX9 453 aaPredicted RBP26.02■■□□□ 1.76
CLTCL1-207ENST00000611723 CLASP1Q7Z460 1538 aa25.98■■□□□ 1.75
CLTCL1-207ENST00000611723 GRIN2AQ12879 1464 aa25.97■■□□□ 1.75
CLTCL1-207ENST00000611723 UBTFP17480 764 aaKnown RBP25.92■■□□□ 1.74
CLTCL1-207ENST00000611723 EHMT2Q96KQ7 1210 aa25.92■■□□□ 1.74
CLTCL1-207ENST00000611723 TNIKQ9UKE5 1360 aa25.9■■□□□ 1.74
CLTCL1-207ENST00000611723 NUP160Q12769 1436 aa25.86■■□□□ 1.73
CLTCL1-207ENST00000611723 KIAA0586Q9BVV6 1533 aa25.78■■□□□ 1.72
CLTCL1-207ENST00000611723 CEP170Q5SW79 1584 aa25.78■■□□□ 1.72
CLTCL1-207ENST00000611723 AEBP2Q6ZN18 517 aaPredicted RBP25.76■■□□□ 1.71
CLTCL1-207ENST00000611723 CTTNBP2Q8WZ74 1663 aa25.73■■□□□ 1.71
CLTCL1-207ENST00000611723 IQGAP2Q13576 1575 aa25.68■■□□□ 1.7
CLTCL1-207ENST00000611723 JPH4Q96JJ6 628 aa25.65■■□□□ 1.7
CLTCL1-207ENST00000611723 ERCC6L2Q5T890 1561 aa25.64■■□□□ 1.69
CLTCL1-207ENST00000611723 CEP162Q5TB80 1403 aa25.63■■□□□ 1.69
CLTCL1-207ENST00000611723 UGGT2Q9NYU1 1516 aa25.61■■□□□ 1.69
CLTCL1-207ENST00000611723 CLIP1P30622 1438 aa25.59■■□□□ 1.69
CLTCL1-207ENST00000611723 RANGAP1P46060 587 aaPredicted RBP25.55■■□□□ 1.68
CLTCL1-207ENST00000611723 SHROOM2Q13796 1616 aa25.54■■□□□ 1.68
CLTCL1-207ENST00000611723 ARHGAP35Q9NRY4 1499 aa25.53■■□□□ 1.68
CLTCL1-207ENST00000611723 EFCAB5A4FU69 1503 aa25.53■■□□□ 1.68
CLTCL1-207ENST00000611723 SAMD9Q5K651 1589 aa25.5■■□□□ 1.67
CLTCL1-207ENST00000611723 DISP1Q96F81 1524 aa25.49■■□□□ 1.67
CLTCL1-207ENST00000611723 CARMIL2Q6F5E8 1435 aa25.47■■□□□ 1.67
CLTCL1-207ENST00000611723 PRG4Q92954 1404 aaPredicted RBP25.47■■□□□ 1.67
CLTCL1-207ENST00000611723 KIAA0556O60303 1618 aa25.42■■□□□ 1.66
CLTCL1-207ENST00000611723 P3H3Q8IVL6 736 aa25.42■■□□□ 1.66
CLTCL1-207ENST00000611723 FHOD3Q2V2M9 1422 aa25.38■■□□□ 1.65
CLTCL1-207ENST00000611723 KIF13AQ9H1H9 1805 aa25.35■■□□□ 1.65
CLTCL1-207ENST00000611723 FMN1Q68DA7 1419 aa25.3■■□□□ 1.64
CLTCL1-207ENST00000611723 VPS8Q8N3P4 1428 aa25.29■■□□□ 1.64
CLTCL1-207ENST00000611723 PTPRGP23470 1445 aa25.29■■□□□ 1.64
CLTCL1-207ENST00000611723 CASKIN1Q8WXD9 1431 aa25.2■■□□□ 1.62
CLTCL1-207ENST00000611723 TTBK1Q5TCY1 1321 aaPredicted RBP25.17■■□□□ 1.62
CLTCL1-207ENST00000611723 ABCA8O94911 1581 aa25.14■■□□□ 1.61
CLTCL1-207ENST00000611723 UACAQ9BZF9 1416 aa25.13■■□□□ 1.61
CLTCL1-207ENST00000611723 PLB1Q6P1J6 1458 aa25.13■■□□□ 1.61
CLTCL1-207ENST00000611723 FYCO1Q9BQS8 1478 aa25.13■■□□□ 1.61
CLTCL1-207ENST00000611723 FAM69CQ0P6D2 419 aa25.11■■□□□ 1.61
CLTCL1-207ENST00000611723 PCF11O94913 1555 aaKnown RBP25.1■■□□□ 1.61
CLTCL1-207ENST00000611723 RAPGEF6Q8TEU7 1601 aa25.1■■□□□ 1.61
CLTCL1-207ENST00000611723 UHRF1BP1LA0JNW5 1464 aa25.09■■□□□ 1.61
CLTCL1-207ENST00000611723 ABCC10Q5T3U5 1492 aa25.09■■□□□ 1.61
CLTCL1-207ENST00000611723 ATP1B4Q9UN42 357 aaPredicted RBP25.05■■□□□ 1.6
CLTCL1-207ENST00000611723 DIP2BQ9P265 1576 aa25.05■■□□□ 1.6
CLTCL1-207ENST00000611723 HECW1Q76N89 1606 aa25.04■■□□□ 1.6
CLTCL1-207ENST00000611723 ADCY10Q96PN6 1610 aa25.04■■□□□ 1.6
CLTCL1-207ENST00000611723 NUP153P49790 1475 aaKnown RBP25.04■■□□□ 1.6
CLTCL1-207ENST00000611723 ABCC2Q92887 1545 aa25.04■■□□□ 1.6
CLTCL1-207ENST00000611723 MAP3K1Q13233 1512 aa25.02■■□□□ 1.6
CLTCL1-207ENST00000611723 MAPKBP1O60336 1514 aa25.02■■□□□ 1.6
CLTCL1-207ENST00000611723 APLP2Q06481 763 aa25.01■■□□□ 1.59
CLTCL1-207ENST00000611723 EPRSP07814 1512 aaKnown RBP25■■□□□ 1.59
CLTCL1-207ENST00000611723 CCDC18Q5T9S5 1454 aa24.98■■□□□ 1.59
CLTCL1-207ENST00000611723 KDM4FA0A1W2PPD8 638 aa24.98■■□□□ 1.59
CLTCL1-207ENST00000611723 NPM1P06748 294 aaKnown RBP eCLIP24.98■■□□□ 1.59
CLTCL1-207ENST00000611723 ATP10BO94823 1461 aa24.97■■□□□ 1.59
CLTCL1-207ENST00000611723 TSPOAP1O95153 1857 aa24.97■■□□□ 1.59
CLTCL1-207ENST00000611723 KDM6BO15054 1643 aa24.94■■□□□ 1.58
CLTCL1-207ENST00000611723 KDM5BQ9UGL1 1544 aa24.94■■□□□ 1.58
CLTCL1-207ENST00000611723 LRRIQ1Q96JM4 1722 aa24.94■■□□□ 1.58
CLTCL1-207ENST00000611723 TIAM1Q13009 1591 aa24.93■■□□□ 1.58
CLTCL1-207ENST00000611723 ARID3CA6NKF2 412 aa24.9■■□□□ 1.58
CLTCL1-207ENST00000611723 CDK13Q14004 1512 aaKnown RBP24.9■■□□□ 1.58
CLTCL1-207ENST00000611723 CDK11AQ9UQ88 783 aaPredicted RBP24.89■■□□□ 1.58
CLTCL1-207ENST00000611723 CFAP43Q8NDM7 1665 aa24.88■■□□□ 1.57
CLTCL1-207ENST00000611723 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.87■■□□□ 1.57
CLTCL1-207ENST00000611723 HNRNPUL2Q1KMD3 747 aaKnown RBP24.87■■□□□ 1.57
CLTCL1-207ENST00000611723 KANK4Q5T7N3 995 aaPredicted RBP24.87■■□□□ 1.57
CLTCL1-207ENST00000611723 LRRC9Q6ZRR7 1453 aa24.85■■□□□ 1.57
CLTCL1-207ENST00000611723 PLEKHD1A6NEE1 506 aa24.84■■□□□ 1.57
CLTCL1-207ENST00000611723 ZCCHC11Q5TAX3 1644 aaKnown RBP24.83■■□□□ 1.56
CLTCL1-207ENST00000611723 MTUS2Q5JR59 1369 aa24.8■■□□□ 1.56
CLTCL1-207ENST00000611723 TROQ12816 1431 aaPredicted RBP24.78■■□□□ 1.56
CLTCL1-207ENST00000611723 MAGI3Q5TCQ9 1506 aa24.78■■□□□ 1.56
CLTCL1-207ENST00000611723 EHBP1L1Q8N3D4 1523 aa24.76■■□□□ 1.55
CLTCL1-207ENST00000611723 PPARGC1BQ86YN6 1023 aaKnown RBP24.75■■□□□ 1.55
CLTCL1-207ENST00000611723 ILDR1Q86SU0 546 aaPredicted RBP24.73■■□□□ 1.55
CLTCL1-207ENST00000611723 PPRC1Q5VV67 1664 aaKnown RBP24.72■■□□□ 1.55
CLTCL1-207ENST00000611723 ASXL2Q76L83 1435 aa24.71■■□□□ 1.55
CLTCL1-207ENST00000611723 WDR7Q9Y4E6 1490 aa24.69■■□□□ 1.54
CLTCL1-207ENST00000611723 SUPT6HQ7KZ85 1726 aaKnown RBP24.64■■□□□ 1.54
CLTCL1-207ENST00000611723 ADGRL1O94910 1474 aa24.64■■□□□ 1.53
CLTCL1-207ENST00000611723 NCOA2Q15596 1464 aa24.64■■□□□ 1.53
CLTCL1-207ENST00000611723 KCNH8Q96L42 1107 aa24.63■■□□□ 1.53
CLTCL1-207ENST00000611723 COL17A1Q9UMD9 1497 aaPredicted RBP24.62■■□□□ 1.53
CLTCL1-207ENST00000611723 GLI2P10070 1586 aa24.61■■□□□ 1.53
CLTCL1-207ENST00000611723 KIF14Q15058 1648 aa24.6■■□□□ 1.53
CLTCL1-207ENST00000611723 PHLDB1Q86UU1 1377 aa24.57■■□□□ 1.52
CLTCL1-207ENST00000611723 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.55■■□□□ 1.52
CLTCL1-207ENST00000611723 CCNB3Q8WWL7 1395 aa24.54■■□□□ 1.52
CLTCL1-207ENST00000611723 GPATCH8Q9UKJ3 1502 aaKnown RBP24.52■■□□□ 1.52
CLTCL1-207ENST00000611723 MYOM3Q5VTT5 1437 aa24.52■■□□□ 1.52
CLTCL1-207ENST00000611723 MAP3K4Q9Y6R4 1608 aa24.51■■□□□ 1.51
CLTCL1-207ENST00000611723 ABCA9Q8IUA7 1624 aa24.5■■□□□ 1.51
CLTCL1-207ENST00000611723 MIA2Q96PC5 1412 aa24.48■■□□□ 1.51
CLTCL1-207ENST00000611723 TTC37Q6PGP7 1564 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms