RNA–Protein interactions for RNA: ENST00000611457.4

CBWD1-219, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 3,324 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-219ENST00000611457 IQGAP2Q13576 1575 aa12.9□□□□□ -0.34
CBWD1-219ENST00000611457 KIF13AQ9H1H9 1805 aa12.89□□□□□ -0.35
CBWD1-219ENST00000611457 KIAA0556O60303 1618 aa12.86□□□□□ -0.35
CBWD1-219ENST00000611457 OSCARQ8IYS5 282 aa12.85□□□□□ -0.35
CBWD1-219ENST00000611457 IGF1RP08069 1367 aa12.84□□□□□ -0.35
CBWD1-219ENST00000611457 KDM5BQ9UGL1 1544 aa12.83□□□□□ -0.36
CBWD1-219ENST00000611457 ADCY10Q96PN6 1610 aa12.82□□□□□ -0.36
CBWD1-219ENST00000611457 EFCAB5A4FU69 1503 aa12.82□□□□□ -0.36
CBWD1-219ENST00000611457 ABCA8O94911 1581 aa12.8□□□□□ -0.36
CBWD1-219ENST00000611457 RAPGEF2Q9Y4G8 1499 aa12.8□□□□□ -0.36
CBWD1-219ENST00000611457 MAP3K4Q9Y6R4 1608 aa12.78□□□□□ -0.36
CBWD1-219ENST00000611457 DISP1Q96F81 1524 aa12.78□□□□□ -0.36
CBWD1-219ENST00000611457 PPRC1Q5VV67 1664 aaKnown RBP12.77□□□□□ -0.37
CBWD1-219ENST00000611457 TDRD9Q8NDG6 1382 aaKnown RBP12.77□□□□□ -0.37
CBWD1-219ENST00000611457 CFAP43Q8NDM7 1665 aa12.75□□□□□ -0.37
CBWD1-219ENST00000611457 GOLGA3Q08378 1498 aa12.74□□□□□ -0.37
CBWD1-219ENST00000611457 DIP2BQ9P265 1576 aa12.74□□□□□ -0.37
CBWD1-219ENST00000611457 ABCC2Q92887 1545 aa12.74□□□□□ -0.37
CBWD1-219ENST00000611457 ERCC6L2Q5T890 1561 aa12.73□□□□□ -0.37
CBWD1-219ENST00000611457 ZCCHC11Q5TAX3 1644 aaKnown RBP12.69□□□□□ -0.38
CBWD1-219ENST00000611457 ARAP3Q8WWN8 1544 aa12.68□□□□□ -0.38
CBWD1-219ENST00000611457 CARMIL1Q5VZK9 1371 aa12.65□□□□□ -0.38
CBWD1-219ENST00000611457 ABCA9Q8IUA7 1624 aa12.64□□□□□ -0.39
CBWD1-219ENST00000611457 CFAP74Q9C0B2 1584 aa12.63□□□□□ -0.39
CBWD1-219ENST00000611457 ABCC10Q5T3U5 1492 aa12.62□□□□□ -0.39
CBWD1-219ENST00000611457 RAPGEF6Q8TEU7 1601 aa12.62□□□□□ -0.39
CBWD1-219ENST00000611457 TNIKQ9UKE5 1360 aa12.59□□□□□ -0.39
CBWD1-219ENST00000611457 PRG4Q92954 1404 aaPredicted RBP12.58□□□□□ -0.39
CBWD1-219ENST00000611457 CARMIL2Q6F5E8 1435 aa12.58□□□□□ -0.4
CBWD1-219ENST00000611457 PLB1Q6P1J6 1458 aa12.56□□□□□ -0.4
CBWD1-219ENST00000611457 LRRIQ1Q96JM4 1722 aa12.56□□□□□ -0.4
CBWD1-219ENST00000611457 MAGI3Q5TCQ9 1506 aa12.56□□□□□ -0.4
CBWD1-219ENST00000611457 HECW1Q76N89 1606 aa12.52□□□□□ -0.41
CBWD1-219ENST00000611457 CHMP7Q8WUX9 453 aaPredicted RBP12.52□□□□□ -0.41
CBWD1-219ENST00000611457 REREQ9P2R6 1566 aa12.51□□□□□ -0.41
CBWD1-219ENST00000611457 UACAQ9BZF9 1416 aa12.51□□□□□ -0.41
CBWD1-219ENST00000611457 BCORL1Q5H9F3 1711 aa12.5□□□□□ -0.41
CBWD1-219ENST00000611457 ZMYM4Q5VZL5 1548 aa12.49□□□□□ -0.41
CBWD1-219ENST00000611457 MAP3K1Q13233 1512 aa12.49□□□□□ -0.41
CBWD1-219ENST00000611457 PHLDB1Q86UU1 1377 aa12.48□□□□□ -0.41
CBWD1-219ENST00000611457 SUPT5HO00267 1087 aaKnown RBP12.48□□□□□ -0.41
CBWD1-219ENST00000611457 EPRSP07814 1512 aaKnown RBP12.46□□□□□ -0.41
CBWD1-219ENST00000611457 RICTORQ6R327 1708 aa12.43□□□□□ -0.42
CBWD1-219ENST00000611457 WDR7Q9Y4E6 1490 aa12.43□□□□□ -0.42
CBWD1-219ENST00000611457 TEX14Q8IWB6 1497 aa12.42□□□□□ -0.42
CBWD1-219ENST00000611457 JPH4Q96JJ6 628 aa12.42□□□□□ -0.42
CBWD1-219ENST00000611457 FAM135AQ9P2D6 1515 aa12.41□□□□□ -0.42
CBWD1-219ENST00000611457 MYO5CQ9NQX4 1742 aa12.41□□□□□ -0.42
CBWD1-219ENST00000611457 CCDC18Q5T9S5 1454 aa12.4□□□□□ -0.42
CBWD1-219ENST00000611457 PREX2Q70Z35 1606 aa12.4□□□□□ -0.42
CBWD1-219ENST00000611457 FRMPD1Q5SYB0 1578 aa12.4□□□□□ -0.42
CBWD1-219ENST00000611457 NEO1Q92859 1461 aa12.4□□□□□ -0.42
CBWD1-219ENST00000611457 FYCO1Q9BQS8 1478 aa12.39□□□□□ -0.43
CBWD1-219ENST00000611457 NUP153P49790 1475 aaKnown RBP12.38□□□□□ -0.43
CBWD1-219ENST00000611457 PTPRGP23470 1445 aa12.37□□□□□ -0.43
CBWD1-219ENST00000611457 ITSN2Q9NZM3 1697 aa12.36□□□□□ -0.43
CBWD1-219ENST00000611457 KDM5CP41229 1560 aa12.35□□□□□ -0.43
CBWD1-219ENST00000611457 ARHGAP35Q9NRY4 1499 aa12.34□□□□□ -0.43
CBWD1-219ENST00000611457 FMN1Q68DA7 1419 aa12.33□□□□□ -0.43
CBWD1-219ENST00000611457 ASXL2Q76L83 1435 aa12.32□□□□□ -0.44
CBWD1-219ENST00000611457 KDM6BO15054 1643 aa12.32□□□□□ -0.44
CBWD1-219ENST00000611457 CASKIN1Q8WXD9 1431 aa12.32□□□□□ -0.44
CBWD1-219ENST00000611457 ATP10BO94823 1461 aa12.32□□□□□ -0.44
CBWD1-219ENST00000611457 CDC42BPAQ5VT25 1732 aa12.31□□□□□ -0.44
CBWD1-219ENST00000611457 CDC42BPBQ9Y5S2 1711 aa12.31□□□□□ -0.44
CBWD1-219ENST00000611457 ARHGEF40Q8TER5 1519 aa12.3□□□□□ -0.44
CBWD1-219ENST00000611457 KIF14Q15058 1648 aa12.3□□□□□ -0.44
CBWD1-219ENST00000611457 PCF11O94913 1555 aaKnown RBP12.3□□□□□ -0.44
CBWD1-219ENST00000611457 MAGI2Q86UL8 1455 aa12.29□□□□□ -0.44
CBWD1-219ENST00000611457 MROH2AA6NES4 1674 aa12.29□□□□□ -0.44
CBWD1-219ENST00000611457 CSRNP3Q8WYN3 585 aa12.29□□□□□ -0.44
CBWD1-219ENST00000611457 ADAMTSL3P82987 1691 aa12.29□□□□□ -0.44
CBWD1-219ENST00000611457 MAST1Q9Y2H9 1570 aa12.28□□□□□ -0.44
CBWD1-219ENST00000611457 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.28□□□□□ -0.44
CBWD1-219ENST00000611457 TTC37Q6PGP7 1564 aa12.26□□□□□ -0.45
CBWD1-219ENST00000611457 FHOD3Q2V2M9 1422 aa12.24□□□□□ -0.45
CBWD1-219ENST00000611457 EHBP1L1Q8N3D4 1523 aa12.24□□□□□ -0.45
CBWD1-219ENST00000611457 CROCC2H7BZ55 1655 aa12.24□□□□□ -0.45
CBWD1-219ENST00000611457 INO80Q9ULG1 1556 aaPredicted RBP12.23□□□□□ -0.45
CBWD1-219ENST00000611457 AGLP35573 1532 aa12.22□□□□□ -0.45
CBWD1-219ENST00000611457 ARHGEF5Q12774 1597 aa12.22□□□□□ -0.45
CBWD1-219ENST00000611457 ADGBQ8N7X0 1667 aa12.21□□□□□ -0.45
CBWD1-219ENST00000611457 PLXNC1O60486 1568 aa12.21□□□□□ -0.46
CBWD1-219ENST00000611457 ABCC1P33527 1531 aa12.21□□□□□ -0.46
CBWD1-219ENST00000611457 EIF2AK4Q9P2K8 1649 aaKnown RBP12.19□□□□□ -0.46
CBWD1-219ENST00000611457 CHIC1Q5VXU3 224 aa12.19□□□□□ -0.46
CBWD1-219ENST00000611457 TRIM41Q8WV44 630 aa12.17□□□□□ -0.46
CBWD1-219ENST00000611457 SUPT6HQ7KZ85 1726 aaKnown RBP12.17□□□□□ -0.46
CBWD1-219ENST00000611457 TROQ12816 1431 aaPredicted RBP12.16□□□□□ -0.46
CBWD1-219ENST00000611457 TIAM1Q13009 1591 aa12.16□□□□□ -0.46
CBWD1-219ENST00000611457 ZC3H13Q5T200 1668 aaKnown RBP12.15□□□□□ -0.46
CBWD1-219ENST00000611457 HECW2Q9P2P5 1572 aa12.15□□□□□ -0.46
CBWD1-219ENST00000611457 TSPOAP1O95153 1857 aa12.14□□□□□ -0.47
CBWD1-219ENST00000611457 KDM5AP29375 1690 aaKnown RBP12.14□□□□□ -0.47
CBWD1-219ENST00000611457 PLCH2O75038 1416 aa12.14□□□□□ -0.47
CBWD1-219ENST00000611457 RNF17Q9BXT8 1623 aaKnown RBP12.13□□□□□ -0.47
CBWD1-219ENST00000611457 CEP162Q5TB80 1403 aa12.13□□□□□ -0.47
CBWD1-219ENST00000611457 PLEKHH2Q8IVE3 1493 aa12.13□□□□□ -0.47
CBWD1-219ENST00000611457 ZNF142P52746 1687 aaPredicted RBP12.13□□□□□ -0.47
CBWD1-219ENST00000611457 KIAA1107Q9UPP5 1409 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms