RNA–Protein interactions for RNA: ENST00000611359.3

ZNF254-206, Transcript of zinc finger protein 254, humanhuman

TSL 3 BASIC

Gene ZNF254, Length 3,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF254-206ENST00000611359 CFTRP13569 1480 aa9.9□□□□□ -0.82
ZNF254-206ENST00000611359 PLPPR3Q6T4P5 718 aa9.89□□□□□ -0.83
ZNF254-206ENST00000611359 VPS8Q8N3P4 1428 aa9.89□□□□□ -0.83
ZNF254-206ENST00000611359 IGF1RP08069 1367 aa9.88□□□□□ -0.83
ZNF254-206ENST00000611359 ZNF316A6NFI3 1004 aaPredicted RBP9.88□□□□□ -0.83
ZNF254-206ENST00000611359 FHAD1B1AJZ9 1412 aa9.87□□□□□ -0.83
ZNF254-206ENST00000611359 FHOD3Q2V2M9 1422 aa9.86□□□□□ -0.83
ZNF254-206ENST00000611359 CHGAP10645 457 aaKnown RBP9.86□□□□□ -0.83
ZNF254-206ENST00000611359 HMGXB3Q12766 1538 aa9.86□□□□□ -0.83
ZNF254-206ENST00000611359 PELP1Q8IZL8 1130 aaKnown RBP9.86□□□□□ -0.83
ZNF254-206ENST00000611359 JPH4Q96JJ6 628 aa9.85□□□□□ -0.83
ZNF254-206ENST00000611359 AQRO60306 1485 aaKnown RBP eCLIP9.85□□□□□ -0.83
ZNF254-206ENST00000611359 TONSLQ96HA7 1378 aa9.84□□□□□ -0.83
ZNF254-206ENST00000611359 SYNJ1O43426 1573 aa9.84□□□□□ -0.83
ZNF254-206ENST00000611359 HIRIP3Q9BW71 556 aaPredicted RBP9.82□□□□□ -0.84
ZNF254-206ENST00000611359 GAPVD1Q14C86 1478 aa9.82□□□□□ -0.84
ZNF254-206ENST00000611359 CCNB3Q8WWL7 1395 aa9.81□□□□□ -0.84
ZNF254-206ENST00000611359 BCANQ96GW7 911 aa9.81□□□□□ -0.84
ZNF254-206ENST00000611359 KDM2AQ9Y2K7 1162 aa9.81□□□□□ -0.84
ZNF254-206ENST00000611359 SENP3Q9H4L4 574 aaPredicted RBP9.81□□□□□ -0.84
ZNF254-206ENST00000611359 ESF1Q9H501 851 aaKnown RBP9.81□□□□□ -0.84
ZNF254-206ENST00000611359 NEFLP07196 543 aa9.8□□□□□ -0.84
ZNF254-206ENST00000611359 CARMIL2Q6F5E8 1435 aa9.79□□□□□ -0.84
ZNF254-206ENST00000611359 CUX1P39880 1505 aa9.79□□□□□ -0.84
ZNF254-206ENST00000611359 SIN3AQ96ST3 1273 aa9.78□□□□□ -0.84
ZNF254-206ENST00000611359 FMN1Q68DA7 1419 aa9.77□□□□□ -0.84
ZNF254-206ENST00000611359 TOPBP1Q92547 1522 aa9.76□□□□□ -0.85
ZNF254-206ENST00000611359 STAG3Q9UJ98 1225 aa9.76□□□□□ -0.85
ZNF254-206ENST00000611359 ANP32CO43423 234 aa9.76□□□□□ -0.85
ZNF254-206ENST00000611359 DDX10Q13206 875 aaKnown RBP9.76□□□□□ -0.85
ZNF254-206ENST00000611359 RGL3Q3MIN7 710 aa9.76□□□□□ -0.85
ZNF254-206ENST00000611359 POLA1P09884 1462 aaPredicted RBP9.75□□□□□ -0.85
ZNF254-206ENST00000611359 PEG3Q9GZU2 1588 aa9.73□□□□□ -0.85
ZNF254-206ENST00000611359 ARHGAP35Q9NRY4 1499 aa9.72□□□□□ -0.85
ZNF254-206ENST00000611359 TOP2BQ02880 1626 aa9.71□□□□□ -0.85
ZNF254-206ENST00000611359 MRC2Q9UBG0 1479 aa9.71□□□□□ -0.86
ZNF254-206ENST00000611359 FOXD1Q16676 465 aa9.7□□□□□ -0.86
ZNF254-206ENST00000611359 CYB5RLQ6IPT4 315 aa9.7□□□□□ -0.86
ZNF254-206ENST00000611359 TRHP20396 242 aaPredicted RBP9.69□□□□□ -0.86
ZNF254-206ENST00000611359 OSCARQ8IYS5 282 aa9.69□□□□□ -0.86
ZNF254-206ENST00000611359 PTPRGP23470 1445 aa9.68□□□□□ -0.86
ZNF254-206ENST00000611359 HNRNPMP52272 730 aaKnown RBP eCLIP9.68□□□□□ -0.861e-7■■■■■ 28
ZNF254-206ENST00000611359 GRIN2BQ13224 1484 aa9.68□□□□□ -0.86
ZNF254-206ENST00000611359 ARID4BQ4LE39 1312 aaPredicted RBP9.68□□□□□ -0.86
ZNF254-206ENST00000611359 PRXQ9BXM0 1461 aa9.67□□□□□ -0.86
ZNF254-206ENST00000611359 ARAP1Q96P48 1450 aa9.65□□□□□ -0.86
ZNF254-206ENST00000611359 MLECQ14165 292 aa9.65□□□□□ -0.86
ZNF254-206ENST00000611359 DNMBPQ6XZF7 1577 aa9.65□□□□□ -0.87
ZNF254-206ENST00000611359 RAB3GAP2Q9H2M9 1393 aa9.65□□□□□ -0.87
ZNF254-206ENST00000611359 EFCAB2Q5VUJ9 269 aa9.65□□□□□ -0.87
ZNF254-206ENST00000611359 KIF21BO75037 1637 aa9.64□□□□□ -0.87
ZNF254-206ENST00000611359 LAMC3Q9Y6N6 1575 aa9.64□□□□□ -0.87
ZNF254-206ENST00000611359 SETD5Q9C0A6 1442 aa9.64□□□□□ -0.87
ZNF254-206ENST00000611359 GGT6Q6P531 493 aa9.64□□□□□ -0.87
ZNF254-206ENST00000611359 IFT140Q96RY7 1462 aa9.63□□□□□ -0.87
ZNF254-206ENST00000611359 URB2Q14146 1524 aaKnown RBP9.63□□□□□ -0.87
ZNF254-206ENST00000611359 EIF4G2P78344 907 aaKnown RBP eCLIP9.63□□□□□ -0.87
ZNF254-206ENST00000611359 MIER1Q8N108 512 aa9.62□□□□□ -0.87
ZNF254-206ENST00000611359 ZNF644Q9H582 1327 aaPredicted RBP9.61□□□□□ -0.87
ZNF254-206ENST00000611359 PKD2Q13563 968 aa9.61□□□□□ -0.87
ZNF254-206ENST00000611359 SNAPC4Q5SXM2 1469 aa9.61□□□□□ -0.87
ZNF254-206ENST00000611359 CCDC18Q5T9S5 1454 aa9.6□□□□□ -0.87
ZNF254-206ENST00000611359 ERICH3Q5RHP9 1530 aa9.59□□□□□ -0.87
ZNF254-206ENST00000611359 ABCA10Q8WWZ4 1543 aa9.59□□□□□ -0.87
ZNF254-206ENST00000611359 MPHOSPH9Q99550 1183 aa9.59□□□□□ -0.87
ZNF254-206ENST00000611359 ZNF608Q9ULD9 1512 aaPredicted RBP9.59□□□□□ -0.87
ZNF254-206ENST00000611359 FAM9BQ8IZU0 186 aa9.58□□□□□ -0.88
ZNF254-206ENST00000611359 DCAF11Q8TEB1 546 aa9.58□□□□□ -0.88
ZNF254-206ENST00000611359 PHLDB1Q86UU1 1377 aa9.58□□□□□ -0.88
ZNF254-206ENST00000611359 NUP155O75694 1391 aa9.57□□□□□ -0.88
ZNF254-206ENST00000611359 PPP1R15AO75807 674 aaPredicted RBP9.57□□□□□ -0.88
ZNF254-206ENST00000611359 CARD11Q9BXL7 1154 aa9.57□□□□□ -0.88
ZNF254-206ENST00000611359 SALL2Q9Y467 1007 aaPredicted RBP9.57□□□□□ -0.88
ZNF254-206ENST00000611359 PRG4Q92954 1404 aaPredicted RBP9.57□□□□□ -0.88
ZNF254-206ENST00000611359 KIF3BO15066 747 aa9.57□□□□□ -0.88
ZNF254-206ENST00000611359 GTF3C3Q9Y5Q9 886 aa9.57□□□□□ -0.88
ZNF254-206ENST00000611359 CLSPNQ9HAW4 1339 aa9.56□□□□□ -0.88
ZNF254-206ENST00000611359 ANKRD30AQ9BXX3 1397 aa9.55□□□□□ -0.88
ZNF254-206ENST00000611359 SPAG9O60271 1321 aaKnown RBP9.55□□□□□ -0.88
ZNF254-206ENST00000611359 SENP3-EIF4A1A0A087X0R7 540 aa9.55□□□□□ -0.88
ZNF254-206ENST00000611359 HNRNPUQ00839 825 aaKnown RBP eCLIP9.54□□□□□ -0.88
ZNF254-206ENST00000611359 PRDM2Q13029 1718 aa9.53□□□□□ -0.88
ZNF254-206ENST00000611359 LRRC9Q6ZRR7 1453 aa9.53□□□□□ -0.88
ZNF254-206ENST00000611359 CASKIN1Q8WXD9 1431 aa9.53□□□□□ -0.88
ZNF254-206ENST00000611359 ACIN1Q9UKV3 1341 aaKnown RBP9.52□□□□□ -0.88
ZNF254-206ENST00000611359 TMC1Q8TDI8 760 aa9.52□□□□□ -0.89
ZNF254-206ENST00000611359 PLEKHG5O94827 1062 aa9.51□□□□□ -0.89
ZNF254-206ENST00000611359 MRS2Q9HD23 443 aa9.51□□□□□ -0.89
ZNF254-206ENST00000611359 KANK1Q14678 1352 aa9.5□□□□□ -0.89
ZNF254-206ENST00000611359 FGD6Q6ZV73 1430 aa9.5□□□□□ -0.89
ZNF254-206ENST00000611359 SLC24A1O60721 1099 aa9.5□□□□□ -0.89
ZNF254-206ENST00000611359 L3MBTL2Q969R5 705 aa9.5□□□□□ -0.89
ZNF254-206ENST00000611359 DHX57Q6P158 1386 aaKnown RBP9.5□□□□□ -0.89
ZNF254-206ENST00000611359 RSPH4AQ5TD94 716 aa9.49□□□□□ -0.89
ZNF254-206ENST00000611359 FAM69CQ0P6D2 419 aa9.48□□□□□ -0.89
ZNF254-206ENST00000611359 NCOA2Q15596 1464 aa9.48□□□□□ -0.89
ZNF254-206ENST00000611359 MYOM3Q5VTT5 1437 aa9.48□□□□□ -0.89
ZNF254-206ENST00000611359 AFAP1Q8N556 730 aa9.48□□□□□ -0.89
ZNF254-206ENST00000611359 KIAA0586Q9BVV6 1533 aa9.48□□□□□ -0.89
ZNF254-206ENST00000611359 BIVM-ERCC5R4GMW8 1640 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms