RNA–Protein interactions for RNA: ENST00000610874.4

TNIP1-221, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 5 BASIC

Gene TNIP1, Length 2,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-221ENST00000610874 KANK4Q5T7N3 995 aaPredicted RBP26.42■■□□□ 1.82
TNIP1-221ENST00000610874 YTHDC1Q96MU7 727 aaKnown RBP26.41■■□□□ 1.82
TNIP1-221ENST00000610874 GAPVD1Q14C86 1478 aa26.36■■□□□ 1.81
TNIP1-221ENST00000610874 WDR97A6NE52 1622 aa26.35■■□□□ 1.81
TNIP1-221ENST00000610874 MRC2Q9UBG0 1479 aa26.31■■□□□ 1.8
TNIP1-221ENST00000610874 ATP1B4Q9UN42 357 aaPredicted RBP26.3■■□□□ 1.8
TNIP1-221ENST00000610874 AQRO60306 1485 aaKnown RBP eCLIP26.29■■□□□ 1.81e-6■■■■□ 26.5
TNIP1-221ENST00000610874 ABCA5Q8WWZ7 1642 aa26.29■■□□□ 1.8
TNIP1-221ENST00000610874 TARBP1Q13395 1621 aaKnown RBP26.27■■□□□ 1.8
TNIP1-221ENST00000610874 MIER1Q8N108 512 aa26.27■■□□□ 1.8
TNIP1-221ENST00000610874 CUL7Q14999 1698 aa26.26■■□□□ 1.79
TNIP1-221ENST00000610874 ERCC6Q03468 1493 aa26.23■■□□□ 1.79
TNIP1-221ENST00000610874 FHOD3Q2V2M9 1422 aa26.22■■□□□ 1.79
TNIP1-221ENST00000610874 ZNF608Q9ULD9 1512 aaPredicted RBP26.17■■□□□ 1.78
TNIP1-221ENST00000610874 CTTNBP2Q8WZ74 1663 aa26.1■■□□□ 1.77
TNIP1-221ENST00000610874 WDR62O43379 1518 aa26.08■■□□□ 1.77
TNIP1-221ENST00000610874 ITGAEP38570 1179 aa26.06■■□□□ 1.76
TNIP1-221ENST00000610874 PBRM1Q86U86 1689 aa26.05■■□□□ 1.76
TNIP1-221ENST00000610874 FHAD1B1AJZ9 1412 aa26.04■■□□□ 1.76
TNIP1-221ENST00000610874 PCF11O94913 1555 aaKnown RBP26.04■■□□□ 1.76
TNIP1-221ENST00000610874 IFT140Q96RY7 1462 aa26.03■■□□□ 1.76
TNIP1-221ENST00000610874 TIAM1Q13009 1591 aa26.01■■□□□ 1.75
TNIP1-221ENST00000610874 GRIN2BQ13224 1484 aa26■■□□□ 1.75
TNIP1-221ENST00000610874 EFCAB5A4FU69 1503 aa25.98■■□□□ 1.75
TNIP1-221ENST00000610874 LRRC9Q6ZRR7 1453 aa25.94■■□□□ 1.74
TNIP1-221ENST00000610874 ADAMTS12P58397 1594 aa25.94■■□□□ 1.74
TNIP1-221ENST00000610874 THOC2Q8NI27 1593 aaKnown RBP25.93■■□□□ 1.74
TNIP1-221ENST00000610874 FBLN2P98095 1184 aa25.92■■□□□ 1.74
TNIP1-221ENST00000610874 CCNB3Q8WWL7 1395 aa25.92■■□□□ 1.74
TNIP1-221ENST00000610874 SNAPC4Q5SXM2 1469 aa25.91■■□□□ 1.74
TNIP1-221ENST00000610874 RRBP1Q9P2E9 1410 aaKnown RBP25.9■■□□□ 1.74
TNIP1-221ENST00000610874 CASKIN1Q8WXD9 1431 aa25.89■■□□□ 1.74
TNIP1-221ENST00000610874 PHLDB1Q86UU1 1377 aa25.89■■□□□ 1.73
TNIP1-221ENST00000610874 EIF4G3O43432 1585 aaKnown RBP25.88■■□□□ 1.73
TNIP1-221ENST00000610874 FMN1Q68DA7 1419 aa25.88■■□□□ 1.73
TNIP1-221ENST00000610874 ARID3CA6NKF2 412 aa25.87■■□□□ 1.73
TNIP1-221ENST00000610874 DHX57Q6P158 1386 aaKnown RBP25.87■■□□□ 1.73
TNIP1-221ENST00000610874 FYCO1Q9BQS8 1478 aa25.87■■□□□ 1.73
TNIP1-221ENST00000610874 SAMD9Q5K651 1589 aa25.86■■□□□ 1.73
TNIP1-221ENST00000610874 FAM50AQ14320 339 aaKnown RBP25.85■■□□□ 1.73
TNIP1-221ENST00000610874 MAP3K1Q13233 1512 aa25.85■■□□□ 1.73
TNIP1-221ENST00000610874 CLSPNQ9HAW4 1339 aa25.82■■□□□ 1.72
TNIP1-221ENST00000610874 CHMP7Q8WUX9 453 aaPredicted RBP25.82■■□□□ 1.72
TNIP1-221ENST00000610874 MYT1Q01538 1121 aa25.81■■□□□ 1.72
TNIP1-221ENST00000610874 IQGAP2Q13576 1575 aa25.81■■□□□ 1.72
TNIP1-221ENST00000610874 CFAP43Q8NDM7 1665 aa25.8■■□□□ 1.72
TNIP1-221ENST00000610874 MTUS2Q5JR59 1369 aa25.75■■□□□ 1.71
TNIP1-221ENST00000610874 GRIN2AQ12879 1464 aa25.73■■□□□ 1.71
TNIP1-221ENST00000610874 LRRIQ1Q96JM4 1722 aa25.71■■□□□ 1.71
TNIP1-221ENST00000610874 KIAA0586Q9BVV6 1533 aa25.66■■□□□ 1.7
TNIP1-221ENST00000610874 MAGI1Q96QZ7 1491 aaPredicted RBP25.64■■□□□ 1.7
TNIP1-221ENST00000610874 SYNJ2O15056 1496 aa25.62■■□□□ 1.69
TNIP1-221ENST00000610874 UGGT2Q9NYU1 1516 aa25.6■■□□□ 1.69
TNIP1-221ENST00000610874 DISP1Q96F81 1524 aa25.6■■□□□ 1.69
TNIP1-221ENST00000610874 CEP170Q5SW79 1584 aa25.59■■□□□ 1.69
TNIP1-221ENST00000610874 RAB3GAP2Q9H2M9 1393 aa25.58■■□□□ 1.69
TNIP1-221ENST00000610874 CDK13Q14004 1512 aaKnown RBP25.58■■□□□ 1.69
TNIP1-221ENST00000610874 MAGI3Q5TCQ9 1506 aa25.57■■□□□ 1.68
TNIP1-221ENST00000610874 SUPT16HQ9Y5B9 1047 aaKnown RBP25.56■■□□□ 1.68
TNIP1-221ENST00000610874 NCOA2Q15596 1464 aa25.56■■□□□ 1.68
TNIP1-221ENST00000610874 FGD6Q6ZV73 1430 aa25.54■■□□□ 1.68
TNIP1-221ENST00000610874 JPH4Q96JJ6 628 aa25.53■■□□□ 1.68
TNIP1-221ENST00000610874 EPRSP07814 1512 aaKnown RBP25.53■■□□□ 1.68
TNIP1-221ENST00000610874 KIAA0556O60303 1618 aa25.53■■□□□ 1.68
TNIP1-221ENST00000610874 HECW1Q76N89 1606 aa25.5■■□□□ 1.67
TNIP1-221ENST00000610874 SETD5Q9C0A6 1442 aa25.48■■□□□ 1.67
TNIP1-221ENST00000610874 CCDC18Q5T9S5 1454 aa25.47■■□□□ 1.67
TNIP1-221ENST00000610874 EHBP1L1Q8N3D4 1523 aa25.46■■□□□ 1.67
TNIP1-221ENST00000610874 MYOM3Q5VTT5 1437 aa25.45■■□□□ 1.66
TNIP1-221ENST00000610874 NUP160Q12769 1436 aa25.44■■□□□ 1.66
TNIP1-221ENST00000610874 SUPT6HQ7KZ85 1726 aaKnown RBP25.44■■□□□ 1.66
TNIP1-221ENST00000610874 PLB1Q6P1J6 1458 aa25.42■■□□□ 1.66
TNIP1-221ENST00000610874 PTPRKQ15262 1439 aa25.41■■□□□ 1.66
TNIP1-221ENST00000610874 NUP153P49790 1475 aaKnown RBP25.41■■□□□ 1.66
TNIP1-221ENST00000610874 CHIC2Q9UKJ5 165 aa25.39■■□□□ 1.66
TNIP1-221ENST00000610874 KCNH8Q96L42 1107 aa25.39■■□□□ 1.65
TNIP1-221ENST00000610874 MAPKBP1O60336 1514 aa25.36■■□□□ 1.65
TNIP1-221ENST00000610874 CARMIL2Q6F5E8 1435 aa25.35■■□□□ 1.65
TNIP1-221ENST00000610874 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.35■■□□□ 1.65
TNIP1-221ENST00000610874 RAPGEF6Q8TEU7 1601 aa25.35■■□□□ 1.65
TNIP1-221ENST00000610874 ARHGEF11O15085 1522 aa25.32■■□□□ 1.64
TNIP1-221ENST00000610874 RRP7BPQ9NSQ0 103 aa25.32■■□□□ 1.64
TNIP1-221ENST00000610874 PTPN23Q9H3S7 1636 aa25.31■■□□□ 1.64
TNIP1-221ENST00000610874 SIN3AQ96ST3 1273 aa25.31■■□□□ 1.64
TNIP1-221ENST00000610874 PRG4Q92954 1404 aaPredicted RBP25.29■■□□□ 1.64
TNIP1-221ENST00000610874 CDK11AQ9UQ88 783 aaPredicted RBP25.28■■□□□ 1.64
TNIP1-221ENST00000610874 ZNF644Q9H582 1327 aaPredicted RBP25.28■■□□□ 1.64
TNIP1-221ENST00000610874 CHD1O14646 1710 aa25.25■■□□□ 1.63
TNIP1-221ENST00000610874 DDX10Q13206 875 aaKnown RBP25.24■■□□□ 1.63
TNIP1-221ENST00000610874 TSHZ2Q9NRE2 1034 aa25.23■■□□□ 1.63
TNIP1-221ENST00000610874 ZNF777Q9ULD5 760 aaPredicted RBP25.19■■□□□ 1.62
TNIP1-221ENST00000610874 HFM1A2PYH4 1435 aa25.19■■□□□ 1.62
TNIP1-221ENST00000610874 NAIPQ13075 1403 aa25.19■■□□□ 1.62
TNIP1-221ENST00000610874 BCANQ96GW7 911 aa25.17■■□□□ 1.62
TNIP1-221ENST00000610874 PTPRGP23470 1445 aa25.16■■□□□ 1.62
TNIP1-221ENST00000610874 TCOF1Q13428 1488 aaKnown RBP25.15■■□□□ 1.62
TNIP1-221ENST00000610874 TROQ12816 1431 aaPredicted RBP25.15■■□□□ 1.62
TNIP1-221ENST00000610874 MIA2Q96PC5 1412 aa25.14■■□□□ 1.62
TNIP1-221ENST00000610874 HIRIP3Q9BW71 556 aaPredicted RBP25.14■■□□□ 1.61
TNIP1-221ENST00000610874 PLEKHD1A6NEE1 506 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms