RNA–Protein interactions for RNA: ENST00000610509.1

NPRL3-210, Transcript of NPR3 like, GATOR1 complex subunit, humanhuman

TSL 2

Gene NPRL3, Length 2,917 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPRL3-210ENST00000610509 TOP2BQ02880 1626 aa18.71■□□□□ 0.59
NPRL3-210ENST00000610509 ATAD2BQ9ULI0 1458 aa18.71■□□□□ 0.59
NPRL3-210ENST00000610509 PEG3Q9GZU2 1588 aa18.7■□□□□ 0.58
NPRL3-210ENST00000610509 SETD5Q9C0A6 1442 aa18.69■□□□□ 0.58
NPRL3-210ENST00000610509 ARHGAP35Q9NRY4 1499 aa18.69■□□□□ 0.58
NPRL3-210ENST00000610509 FANCIQ9NVI1 1328 aa18.68■□□□□ 0.58
NPRL3-210ENST00000610509 ERICH6Q7L0X2 663 aa18.68■□□□□ 0.58
NPRL3-210ENST00000610509 FAM50AQ14320 339 aaKnown RBP18.64■□□□□ 0.57
NPRL3-210ENST00000610509 CDK11AQ9UQ88 783 aaPredicted RBP18.63■□□□□ 0.57
NPRL3-210ENST00000610509 HNRNPUQ00839 825 aaKnown RBP eCLIP18.62■□□□□ 0.57
NPRL3-210ENST00000610509 PHLDB1Q86UU1 1377 aa18.61■□□□□ 0.57
NPRL3-210ENST00000610509 BIVM-ERCC5R4GMW8 1640 aa18.58■□□□□ 0.56
NPRL3-210ENST00000610509 TIAM1Q13009 1591 aa18.53■□□□□ 0.56
NPRL3-210ENST00000610509 DEKP35659 375 aaKnown RBP18.53■□□□□ 0.56
NPRL3-210ENST00000610509 KIF27Q86VH2 1401 aa18.53■□□□□ 0.56
NPRL3-210ENST00000610509 TIMELESSQ9UNS1 1208 aa18.5■□□□□ 0.55
NPRL3-210ENST00000610509 LRRC9Q6ZRR7 1453 aa18.5■□□□□ 0.55
NPRL3-210ENST00000610509 CUX1P39880 1505 aa18.5■□□□□ 0.55
NPRL3-210ENST00000610509 PRKCSHP14314 528 aaPredicted RBP18.47■□□□□ 0.55
NPRL3-210ENST00000610509 TONSLQ96HA7 1378 aa18.46■□□□□ 0.55
NPRL3-210ENST00000610509 B4GALNT3Q6L9W6 998 aa18.46■□□□□ 0.55
NPRL3-210ENST00000610509 ATP1B4Q9UN42 357 aaPredicted RBP18.45■□□□□ 0.54
NPRL3-210ENST00000610509 NBR1Q14596 966 aa18.43■□□□□ 0.54
NPRL3-210ENST00000610509 PPP4R2Q9NY27 417 aa18.43■□□□□ 0.54
NPRL3-210ENST00000610509 CCDC184Q52MB2 194 aa18.43■□□□□ 0.54
NPRL3-210ENST00000610509 P3H3Q8IVL6 736 aa18.43■□□□□ 0.54
NPRL3-210ENST00000610509 PAK3O75914 559 aaPredicted RBP18.4■□□□□ 0.54
NPRL3-210ENST00000610509 MAP3K1Q13233 1512 aa18.4■□□□□ 0.54
NPRL3-210ENST00000610509 MYT1LQ9UL68 1186 aa18.36■□□□□ 0.53
NPRL3-210ENST00000610509 NCAPD3P42695 1498 aa18.36■□□□□ 0.53
NPRL3-210ENST00000610509 WASHC2AQ641Q2 1341 aa18.36■□□□□ 0.53
NPRL3-210ENST00000610509 NOP58Q9Y2X3 529 aaKnown RBP18.35■□□□□ 0.53
NPRL3-210ENST00000610509 IGF1RP08069 1367 aa18.33■□□□□ 0.53
NPRL3-210ENST00000610509 FAM9BQ8IZU0 186 aa18.33■□□□□ 0.52
NPRL3-210ENST00000610509 ERICH6BQ5W0A0 696 aa18.32■□□□□ 0.52
NPRL3-210ENST00000610509 PCF11O94913 1555 aaKnown RBP18.32■□□□□ 0.52
NPRL3-210ENST00000610509 CCDC18Q5T9S5 1454 aa18.3■□□□□ 0.52
NPRL3-210ENST00000610509 HSPA5P11021 654 aaKnown RBP18.3■□□□□ 0.52
NPRL3-210ENST00000610509 ANO8Q9HCE9 1232 aaPredicted RBP18.29■□□□□ 0.52
NPRL3-210ENST00000610509 HMGXB3Q12766 1538 aa18.28■□□□□ 0.52
NPRL3-210ENST00000610509 FHAD1B1AJZ9 1412 aa18.28■□□□□ 0.52
NPRL3-210ENST00000610509 KDM5BQ9UGL1 1544 aa18.28■□□□□ 0.52
NPRL3-210ENST00000610509 CFAP43Q8NDM7 1665 aa18.27■□□□□ 0.51
NPRL3-210ENST00000610509 CARMIL1Q5VZK9 1371 aa18.27■□□□□ 0.51
NPRL3-210ENST00000610509 PTPRKQ15262 1439 aa18.26■□□□□ 0.51
NPRL3-210ENST00000610509 AQRO60306 1485 aaKnown RBP eCLIP18.25■□□□□ 0.51
NPRL3-210ENST00000610509 FHOD3Q2V2M9 1422 aa18.25■□□□□ 0.51
NPRL3-210ENST00000610509 UACAQ9BZF9 1416 aa18.24■□□□□ 0.51
NPRL3-210ENST00000610509 MRS2Q9HD23 443 aa18.23■□□□□ 0.51
NPRL3-210ENST00000610509 C11orf95C9JLR9 678 aaPredicted RBP18.22■□□□□ 0.51
NPRL3-210ENST00000610509 FGD6Q6ZV73 1430 aa18.21■□□□□ 0.51
NPRL3-210ENST00000610509 PRKRIP1Q9H875 184 aaPredicted RBP18.21■□□□□ 0.51
NPRL3-210ENST00000610509 ZBED9Q6R2W3 1325 aa18.2■□□□□ 0.5
NPRL3-210ENST00000610509 HFM1A2PYH4 1435 aa18.19■□□□□ 0.5
NPRL3-210ENST00000610509 CNTLNQ9NXG0 1405 aa18.19■□□□□ 0.5
NPRL3-210ENST00000610509 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.18■□□□□ 0.5
NPRL3-210ENST00000610509 SENP3-EIF4A1A0A087X0R7 540 aa18.18■□□□□ 0.5
NPRL3-210ENST00000610509 CC2D2AQ9P2K1 1620 aa18.17■□□□□ 0.5
NPRL3-210ENST00000610509 PTPN23Q9H3S7 1636 aa18.17■□□□□ 0.5
NPRL3-210ENST00000610509 AKNAQ7Z591 1439 aa18.17■□□□□ 0.5
NPRL3-210ENST00000610509 SALL2Q9Y467 1007 aaPredicted RBP18.17■□□□□ 0.5
NPRL3-210ENST00000610509 EIF4G2P78344 907 aaKnown RBP eCLIP18.16■□□□□ 0.5
NPRL3-210ENST00000610509 NCOA2Q15596 1464 aa18.16■□□□□ 0.5
NPRL3-210ENST00000610509 NAIPQ13075 1403 aa18.16■□□□□ 0.5
NPRL3-210ENST00000610509 CFTRP13569 1480 aa18.15■□□□□ 0.5
NPRL3-210ENST00000610509 CNGB1Q14028 1251 aaPredicted RBP18.15■□□□□ 0.5
NPRL3-210ENST00000610509 IL27Q8NEV9 243 aa18.15■□□□□ 0.5
NPRL3-210ENST00000610509 IPO9Q96P70 1041 aaKnown RBP18.14■□□□□ 0.49
NPRL3-210ENST00000610509 ANP32AP39687 249 aaKnown RBP18.13■□□□□ 0.49
NPRL3-210ENST00000610509 RTL5Q5HYW3 569 aaPredicted RBP18.12■□□□□ 0.49
NPRL3-210ENST00000610509 FYCO1Q9BQS8 1478 aa18.12■□□□□ 0.49
NPRL3-210ENST00000610509 RTN4Q9NQC3 1192 aaKnown RBP18.12■□□□□ 0.49
NPRL3-210ENST00000610509 CCDC136Q96JN2 1154 aa18.11■□□□□ 0.49
NPRL3-210ENST00000610509 RRP7BPQ9NSQ0 103 aa18.11■□□□□ 0.49
NPRL3-210ENST00000610509 CCDC7Q96M83 1385 aa18.1■□□□□ 0.49
NPRL3-210ENST00000610509 CASKIN1Q8WXD9 1431 aa18.1■□□□□ 0.49
NPRL3-210ENST00000610509 FGD5Q6ZNL6 1462 aa18.09■□□□□ 0.49
NPRL3-210ENST00000610509 ZBTB47Q9UFB7 747 aaPredicted RBP18.09■□□□□ 0.49
NPRL3-210ENST00000610509 MTUS2Q5JR59 1369 aa18.09■□□□□ 0.49
NPRL3-210ENST00000610509 CHIC2Q9UKJ5 165 aa18.09■□□□□ 0.49
NPRL3-210ENST00000610509 FOXD1Q16676 465 aa18.07■□□□□ 0.48
NPRL3-210ENST00000610509 DENND4BO75064 1496 aaPredicted RBP18.07■□□□□ 0.48
NPRL3-210ENST00000610509 L3MBTL2Q969R5 705 aa18.07■□□□□ 0.48
NPRL3-210ENST00000610509 NCOA1Q15788 1441 aa18.07■□□□□ 0.48
NPRL3-210ENST00000610509 FMN1Q68DA7 1419 aa18.07■□□□□ 0.48
NPRL3-210ENST00000610509 CADPSQ9ULU8 1353 aa18.06■□□□□ 0.48
NPRL3-210ENST00000610509 NPM2Q86SE8 214 aaKnown RBP18.03■□□□□ 0.48
NPRL3-210ENST00000610509 KIF7Q2M1P5 1343 aa18.02■□□□□ 0.48
NPRL3-210ENST00000610509 SMG6Q86US8 1419 aaKnown RBP18.02■□□□□ 0.48
NPRL3-210ENST00000610509 DNAJC5BQ9UF47 199 aa18.02■□□□□ 0.47
NPRL3-210ENST00000610509 NBPF8Q3BBV2 869 aa18.01■□□□□ 0.47
NPRL3-210ENST00000610509 NUDCQ9Y266 331 aa18.01■□□□□ 0.47
NPRL3-210ENST00000610509 LAS1LQ9Y4W2 734 aaKnown RBP18■□□□□ 0.47
NPRL3-210ENST00000610509 MYOM3Q5VTT5 1437 aa18■□□□□ 0.47
NPRL3-210ENST00000610509 RNF123Q5XPI4 1314 aa17.98■□□□□ 0.47
NPRL3-210ENST00000610509 SNAPC4Q5SXM2 1469 aa17.98■□□□□ 0.47
NPRL3-210ENST00000610509 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.98■□□□□ 0.47
NPRL3-210ENST00000610509 NESP48681 1621 aa17.97■□□□□ 0.47
NPRL3-210ENST00000610509 KDM6BO15054 1643 aa17.96■□□□□ 0.47
NPRL3-210ENST00000610509 EFCAB5A4FU69 1503 aa17.96■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms