RNA–Protein interactions for RNA: ENST00000610485.1

SNX20-205, Transcript of sorting nexin 20, humanhuman

TSL 5 BASIC

Gene SNX20, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-205ENST00000610485 JPH4Q96JJ6 628 aa22.17■■□□□ 1.14
SNX20-205ENST00000610485 CARMIL1Q5VZK9 1371 aa22.16■■□□□ 1.14
SNX20-205ENST00000610485 KIAA0586Q9BVV6 1533 aa22.15■■□□□ 1.14
SNX20-205ENST00000610485 TRHP20396 242 aaPredicted RBP22.11■■□□□ 1.13
SNX20-205ENST00000610485 RAPGEF2Q9Y4G8 1499 aa22.01■■□□□ 1.11
SNX20-205ENST00000610485 IQGAP2Q13576 1575 aa21.97■■□□□ 1.11
SNX20-205ENST00000610485 CARMIL2Q6F5E8 1435 aa21.9■■□□□ 1.1
SNX20-205ENST00000610485 ADCY10Q96PN6 1610 aa21.89■■□□□ 1.09
SNX20-205ENST00000610485 PRXQ9BXM0 1461 aa21.88■■□□□ 1.09
SNX20-205ENST00000610485 TNIKQ9UKE5 1360 aa21.87■■□□□ 1.09
SNX20-205ENST00000610485 UGGT2Q9NYU1 1516 aa21.86■■□□□ 1.09
SNX20-205ENST00000610485 PTPRGP23470 1445 aa21.86■■□□□ 1.09
SNX20-205ENST00000610485 DISP1Q96F81 1524 aa21.85■■□□□ 1.09
SNX20-205ENST00000610485 MAPKBP1O60336 1514 aa21.83■■□□□ 1.09
SNX20-205ENST00000610485 NPM1P06748 294 aaKnown RBP eCLIP21.82■■□□□ 1.08
SNX20-205ENST00000610485 CTTNBP2Q8WZ74 1663 aa21.79■■□□□ 1.08
SNX20-205ENST00000610485 KIAA0556O60303 1618 aa21.77■■□□□ 1.08
SNX20-205ENST00000610485 ABCC10Q5T3U5 1492 aa21.77■■□□□ 1.07
SNX20-205ENST00000610485 KIF13AQ9H1H9 1805 aa21.75■■□□□ 1.07
SNX20-205ENST00000610485 EEA1Q15075 1411 aa21.74■■□□□ 1.07
SNX20-205ENST00000610485 CSRNP3Q8WYN3 585 aa21.74■■□□□ 1.07
SNX20-205ENST00000610485 UHRF1BP1LA0JNW5 1464 aa21.74■■□□□ 1.07
SNX20-205ENST00000610485 TTBK1Q5TCY1 1321 aaPredicted RBP21.74■■□□□ 1.07
SNX20-205ENST00000610485 ABCC2Q92887 1545 aa21.73■■□□□ 1.07
SNX20-205ENST00000610485 UACAQ9BZF9 1416 aa21.72■■□□□ 1.07
SNX20-205ENST00000610485 DIP2BQ9P265 1576 aa21.71■■□□□ 1.07
SNX20-205ENST00000610485 GOLGA3Q08378 1498 aa21.7■■□□□ 1.06
SNX20-205ENST00000610485 FAM69CQ0P6D2 419 aa21.68■■□□□ 1.06
SNX20-205ENST00000610485 KDM5BQ9UGL1 1544 aa21.64■■□□□ 1.05
SNX20-205ENST00000610485 PLB1Q6P1J6 1458 aa21.61■■□□□ 1.05
SNX20-205ENST00000610485 ASXL2Q76L83 1435 aa21.61■■□□□ 1.05
SNX20-205ENST00000610485 CHIC1Q5VXU3 224 aa21.59■■□□□ 1.05
SNX20-205ENST00000610485 ABCA8O94911 1581 aa21.57■■□□□ 1.04
SNX20-205ENST00000610485 ZCCHC11Q5TAX3 1644 aaKnown RBP21.56■■□□□ 1.04
SNX20-205ENST00000610485 FAM9AQ8IZU1 332 aaPredicted RBP21.55■■□□□ 1.04
SNX20-205ENST00000610485 GLI2P10070 1586 aa21.55■■□□□ 1.04
SNX20-205ENST00000610485 KIF21BO75037 1637 aa21.54■■□□□ 1.04
SNX20-205ENST00000610485 SAMD9Q5K651 1589 aa21.53■■□□□ 1.04
SNX20-205ENST00000610485 EPRSP07814 1512 aaKnown RBP21.5■■□□□ 1.03
SNX20-205ENST00000610485 P3H3Q8IVL6 736 aa21.47■■□□□ 1.03
SNX20-205ENST00000610485 WDR7Q9Y4E6 1490 aa21.46■■□□□ 1.03
SNX20-205ENST00000610485 KDM6BO15054 1643 aa21.43■■□□□ 1.02
SNX20-205ENST00000610485 TSPOAP1O95153 1857 aa21.43■■□□□ 1.02
SNX20-205ENST00000610485 PPRC1Q5VV67 1664 aaKnown RBP21.42■■□□□ 1.02
SNX20-205ENST00000610485 MAP3K4Q9Y6R4 1608 aa21.41■■□□□ 1.02
SNX20-205ENST00000610485 EFCAB5A4FU69 1503 aa21.39■■□□□ 1.01
SNX20-205ENST00000610485 FHOD3Q2V2M9 1422 aa21.38■■□□□ 1.01
SNX20-205ENST00000610485 ATP10BO94823 1461 aa21.37■■□□□ 1.01
SNX20-205ENST00000610485 RAPGEF6Q8TEU7 1601 aa21.37■■□□□ 1.01
SNX20-205ENST00000610485 RANGAP1P46060 587 aaPredicted RBP21.35■■□□□ 1.01
SNX20-205ENST00000610485 TEX14Q8IWB6 1497 aa21.34■■□□□ 1.01
SNX20-205ENST00000610485 NUP153P49790 1475 aaKnown RBP21.31■■□□□ 1
SNX20-205ENST00000610485 ARID3CA6NKF2 412 aa21.3■■□□□ 1
SNX20-205ENST00000610485 CFAP43Q8NDM7 1665 aa21.29■■□□□ 1
SNX20-205ENST00000610485 UBTFP17480 764 aaKnown RBP21.29■■□□□ 1
SNX20-205ENST00000610485 KCNH8Q96L42 1107 aa21.29■■□□□ 1
SNX20-205ENST00000610485 MAGI3Q5TCQ9 1506 aa21.29■■□□□ 1
SNX20-205ENST00000610485 CD109Q6YHK3 1445 aa21.28■■□□□ 1
SNX20-205ENST00000610485 EHMT2Q96KQ7 1210 aa21.27■■□□□ 1
SNX20-205ENST00000610485 COL17A1Q9UMD9 1497 aaPredicted RBP21.26■□□□□ 0.99
SNX20-205ENST00000610485 ARHGAP35Q9NRY4 1499 aa21.22■□□□□ 0.99
SNX20-205ENST00000610485 AEBP2Q6ZN18 517 aaPredicted RBP21.21■□□□□ 0.99
SNX20-205ENST00000610485 ABCA9Q8IUA7 1624 aa21.21■□□□□ 0.99
SNX20-205ENST00000610485 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.19■□□□□ 0.98
SNX20-205ENST00000610485 HNRNPUL2Q1KMD3 747 aaKnown RBP21.19■□□□□ 0.98
SNX20-205ENST00000610485 FMN1Q68DA7 1419 aa21.17■□□□□ 0.98
SNX20-205ENST00000610485 PLEKHD1A6NEE1 506 aa21.12■□□□□ 0.97
SNX20-205ENST00000610485 CDK13Q14004 1512 aaKnown RBP21.11■□□□□ 0.97
SNX20-205ENST00000610485 HECW1Q76N89 1606 aa21.11■□□□□ 0.97
SNX20-205ENST00000610485 ARAP3Q8WWN8 1544 aa21.1■□□□□ 0.97
SNX20-205ENST00000610485 PHLDB1Q86UU1 1377 aa21.1■□□□□ 0.97
SNX20-205ENST00000610485 NEO1Q92859 1461 aa21.07■□□□□ 0.96
SNX20-205ENST00000610485 KDM4FA0A1W2PPD8 638 aa21.07■□□□□ 0.96
SNX20-205ENST00000610485 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.05■□□□□ 0.96
SNX20-205ENST00000610485 TTC37Q6PGP7 1564 aa21.02■□□□□ 0.95
SNX20-205ENST00000610485 ATP1B4Q9UN42 357 aaPredicted RBP21.01■□□□□ 0.95
SNX20-205ENST00000610485 ADGRL1O94910 1474 aa21■□□□□ 0.95
SNX20-205ENST00000610485 CASKIN1Q8WXD9 1431 aa20.98■□□□□ 0.95
SNX20-205ENST00000610485 PCF11O94913 1555 aaKnown RBP20.97■□□□□ 0.95
SNX20-205ENST00000610485 CLIP1P30622 1438 aa20.97■□□□□ 0.95
SNX20-205ENST00000610485 CDK11AQ9UQ88 783 aaPredicted RBP20.97■□□□□ 0.95
SNX20-205ENST00000610485 FANCAO15360 1455 aa20.96■□□□□ 0.95
SNX20-205ENST00000610485 CFAP74Q9C0B2 1584 aa20.96■□□□□ 0.95
SNX20-205ENST00000610485 FRMPD1Q5SYB0 1578 aa20.95■□□□□ 0.94
SNX20-205ENST00000610485 LRRIQ1Q96JM4 1722 aa20.95■□□□□ 0.94
SNX20-205ENST00000610485 TROQ12816 1431 aaPredicted RBP20.95■□□□□ 0.94
SNX20-205ENST00000610485 AKNAQ7Z591 1439 aa20.95■□□□□ 0.94
SNX20-205ENST00000610485 RAPGEF3O95398 923 aa20.94■□□□□ 0.94
SNX20-205ENST00000610485 PLCH2O75038 1416 aa20.93■□□□□ 0.94
SNX20-205ENST00000610485 CCDC18Q5T9S5 1454 aa20.93■□□□□ 0.94
SNX20-205ENST00000610485 FYCO1Q9BQS8 1478 aa20.92■□□□□ 0.94
SNX20-205ENST00000610485 DENND4BO75064 1496 aaPredicted RBP20.91■□□□□ 0.94
SNX20-205ENST00000610485 KIF14Q15058 1648 aa20.91■□□□□ 0.94
SNX20-205ENST00000610485 RICTORQ6R327 1708 aa20.87■□□□□ 0.93
SNX20-205ENST00000610485 MYO5CQ9NQX4 1742 aa20.85■□□□□ 0.93
SNX20-205ENST00000610485 ZMYM4Q5VZL5 1548 aa20.83■□□□□ 0.93
SNX20-205ENST00000610485 ARHGEF40Q8TER5 1519 aa20.83■□□□□ 0.92
SNX20-205ENST00000610485 CEP162Q5TB80 1403 aa20.82■□□□□ 0.92
SNX20-205ENST00000610485 EFCAB2Q5VUJ9 269 aa20.82■□□□□ 0.92
SNX20-205ENST00000610485 POGZQ7Z3K3 1410 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms