RNA–Protein interactions for RNA: ENST00000609774.1

LMBR1-221, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-221ENST00000609774 MAGI1Q96QZ7 1491 aaPredicted RBP12.75□□□□□ -0.37
LMBR1-221ENST00000609774 FBLN2P98095 1184 aa12.7□□□□□ -0.38
LMBR1-221ENST00000609774 SNAPC4Q5SXM2 1469 aa12.7□□□□□ -0.38
LMBR1-221ENST00000609774 SOGA1O94964 1423 aa12.7□□□□□ -0.38
LMBR1-221ENST00000609774 SYNJ2O15056 1496 aa12.68□□□□□ -0.38
LMBR1-221ENST00000609774 RAD54L2Q9Y4B4 1467 aa12.68□□□□□ -0.38
LMBR1-221ENST00000609774 TDRD9Q8NDG6 1382 aaKnown RBP12.68□□□□□ -0.38
LMBR1-221ENST00000609774 GRIN2BQ13224 1484 aa12.67□□□□□ -0.38
LMBR1-221ENST00000609774 GAPVD1Q14C86 1478 aa12.65□□□□□ -0.38
LMBR1-221ENST00000609774 CHMP7Q8WUX9 453 aaPredicted RBP12.65□□□□□ -0.38
LMBR1-221ENST00000609774 FGD5Q6ZNL6 1462 aa12.63□□□□□ -0.39
LMBR1-221ENST00000609774 PBRM1Q86U86 1689 aa12.57□□□□□ -0.4
LMBR1-221ENST00000609774 CUX1P39880 1505 aa12.57□□□□□ -0.4
LMBR1-221ENST00000609774 ABCB7O75027 752 aa12.56□□□□□ -0.4
LMBR1-221ENST00000609774 ABCA5Q8WWZ7 1642 aa12.55□□□□□ -0.4
LMBR1-221ENST00000609774 ABCA10Q8WWZ4 1543 aa12.54□□□□□ -0.4
LMBR1-221ENST00000609774 SHROOM2Q13796 1616 aa12.54□□□□□ -0.4
LMBR1-221ENST00000609774 KIF13AQ9H1H9 1805 aa12.53□□□□□ -0.4
LMBR1-221ENST00000609774 NUP160Q12769 1436 aa12.53□□□□□ -0.4
LMBR1-221ENST00000609774 GRIN2AQ12879 1464 aa12.5□□□□□ -0.41
LMBR1-221ENST00000609774 CEP170Q5SW79 1584 aa12.5□□□□□ -0.41
LMBR1-221ENST00000609774 ERCC6L2Q5T890 1561 aa12.5□□□□□ -0.41
LMBR1-221ENST00000609774 SUPT5HO00267 1087 aaKnown RBP12.48□□□□□ -0.41
LMBR1-221ENST00000609774 ADAMTS12P58397 1594 aa12.45□□□□□ -0.42
LMBR1-221ENST00000609774 ABCC10Q5T3U5 1492 aa12.42□□□□□ -0.42
LMBR1-221ENST00000609774 MAPKBP1O60336 1514 aa12.42□□□□□ -0.42
LMBR1-221ENST00000609774 FHAD1B1AJZ9 1412 aa12.41□□□□□ -0.42
LMBR1-221ENST00000609774 ZNF219Q9P2Y4 722 aaPredicted RBP12.4□□□□□ -0.42
LMBR1-221ENST00000609774 ERICH3Q5RHP9 1530 aa12.39□□□□□ -0.43
LMBR1-221ENST00000609774 HRCP23327 699 aa12.38□□□□□ -0.43
LMBR1-221ENST00000609774 POTEHQ6S545 545 aa12.38□□□□□ -0.43
LMBR1-221ENST00000609774 WRNQ14191 1432 aaPredicted RBP eCLIP12.37□□□□□ -0.43
LMBR1-221ENST00000609774 DIP2BQ9P265 1576 aa12.36□□□□□ -0.43
LMBR1-221ENST00000609774 KDM4FA0A1W2PPD8 638 aa12.35□□□□□ -0.43
LMBR1-221ENST00000609774 PRG4Q92954 1404 aaPredicted RBP12.34□□□□□ -0.43
LMBR1-221ENST00000609774 BIVM-ERCC5R4GMW8 1640 aa12.33□□□□□ -0.43
LMBR1-221ENST00000609774 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.33□□□□□ -0.44
LMBR1-221ENST00000609774 HNRNPUL2Q1KMD3 747 aaKnown RBP12.33□□□□□ -0.44
LMBR1-221ENST00000609774 APLP2Q06481 763 aa12.32□□□□□ -0.44
LMBR1-221ENST00000609774 SAMD1Q6SPF0 538 aaPredicted RBP12.32□□□□□ -0.44
LMBR1-221ENST00000609774 JPH4Q96JJ6 628 aa12.32□□□□□ -0.44
LMBR1-221ENST00000609774 TOP2BQ02880 1626 aa12.32□□□□□ -0.44
LMBR1-221ENST00000609774 FAM69CQ0P6D2 419 aa12.31□□□□□ -0.44
LMBR1-221ENST00000609774 KDM6BO15054 1643 aa12.3□□□□□ -0.44
LMBR1-221ENST00000609774 ILDR1Q86SU0 546 aaPredicted RBP12.3□□□□□ -0.44
LMBR1-221ENST00000609774 RUSC2Q8N2Y8 1516 aa12.29□□□□□ -0.44
LMBR1-221ENST00000609774 ADCY10Q96PN6 1610 aa12.29□□□□□ -0.44
LMBR1-221ENST00000609774 NPM1P06748 294 aaKnown RBP eCLIP12.26□□□□□ -0.45
LMBR1-221ENST00000609774 MYCNP04198 464 aaPredicted RBP12.23□□□□□ -0.45
LMBR1-221ENST00000609774 GLI2P10070 1586 aa12.22□□□□□ -0.45
LMBR1-221ENST00000609774 KIAA0586Q9BVV6 1533 aa12.21□□□□□ -0.46
LMBR1-221ENST00000609774 POLA2Q14181 598 aa12.19□□□□□ -0.46
LMBR1-221ENST00000609774 PPRC1Q5VV67 1664 aaKnown RBP12.19□□□□□ -0.46
LMBR1-221ENST00000609774 SLC4A1APQ9BWU0 796 aaKnown RBP12.18□□□□□ -0.46
LMBR1-221ENST00000609774 ATF5Q9Y2D1 282 aaPredicted RBP12.18□□□□□ -0.46
LMBR1-221ENST00000609774 TSPOAP1O95153 1857 aa12.18□□□□□ -0.46
LMBR1-221ENST00000609774 ADGRL1O94910 1474 aa12.14□□□□□ -0.47
LMBR1-221ENST00000609774 ABCC2Q92887 1545 aa12.14□□□□□ -0.47
LMBR1-221ENST00000609774 UHRF1BP1LA0JNW5 1464 aa12.14□□□□□ -0.47
LMBR1-221ENST00000609774 PLB1Q6P1J6 1458 aa12.14□□□□□ -0.47
LMBR1-221ENST00000609774 CUL7Q14999 1698 aa12.11□□□□□ -0.47
LMBR1-221ENST00000609774 PCGF6Q9BYE7 350 aa12.11□□□□□ -0.47
LMBR1-221ENST00000609774 PTPRGP23470 1445 aa12.11□□□□□ -0.47
LMBR1-221ENST00000609774 HECW2Q9P2P5 1572 aa12.1□□□□□ -0.47
LMBR1-221ENST00000609774 ASXL2Q76L83 1435 aa12.1□□□□□ -0.47
LMBR1-221ENST00000609774 COL17A1Q9UMD9 1497 aaPredicted RBP12.09□□□□□ -0.47
LMBR1-221ENST00000609774 IGF1RP08069 1367 aa12.09□□□□□ -0.47
LMBR1-221ENST00000609774 MAP3K4Q9Y6R4 1608 aa12.09□□□□□ -0.47
LMBR1-221ENST00000609774 TNIKQ9UKE5 1360 aa12.07□□□□□ -0.48
LMBR1-221ENST00000609774 FOXD4L1Q9NU39 408 aa12.07□□□□□ -0.48
LMBR1-221ENST00000609774 KDM5BQ9UGL1 1544 aa12.06□□□□□ -0.48
LMBR1-221ENST00000609774 TEX14Q8IWB6 1497 aa12.06□□□□□ -0.48
LMBR1-221ENST00000609774 CARMIL2Q6F5E8 1435 aa12.05□□□□□ -0.48
LMBR1-221ENST00000609774 ZBTB22O15209 634 aa12.05□□□□□ -0.48
LMBR1-221ENST00000609774 EPRSP07814 1512 aaKnown RBP12.05□□□□□ -0.48
LMBR1-221ENST00000609774 KIF27Q86VH2 1401 aa12.03□□□□□ -0.48
LMBR1-221ENST00000609774 UACAQ9BZF9 1416 aa12.03□□□□□ -0.48
LMBR1-221ENST00000609774 ZEB1P37275 1124 aaPredicted RBP12.03□□□□□ -0.48
LMBR1-221ENST00000609774 TRIM26Q12899 539 aaPredicted RBP12□□□□□ -0.49
LMBR1-221ENST00000609774 FBXO41Q8TF61 875 aa12□□□□□ -0.49
LMBR1-221ENST00000609774 RBM42Q9BTD8 480 aaKnown RBP11.99□□□□□ -0.49
LMBR1-221ENST00000609774 DISP1Q96F81 1524 aa11.99□□□□□ -0.49
LMBR1-221ENST00000609774 IQGAP2Q13576 1575 aa11.99□□□□□ -0.49
LMBR1-221ENST00000609774 MAGI3Q5TCQ9 1506 aa11.98□□□□□ -0.49
LMBR1-221ENST00000609774 CARMIL1Q5VZK9 1371 aa11.97□□□□□ -0.49
LMBR1-221ENST00000609774 ZCCHC11Q5TAX3 1644 aaKnown RBP11.97□□□□□ -0.49
LMBR1-221ENST00000609774 UGGT2Q9NYU1 1516 aa11.96□□□□□ -0.5
LMBR1-221ENST00000609774 WDR7Q9Y4E6 1490 aa11.94□□□□□ -0.5
LMBR1-221ENST00000609774 CFAP43Q8NDM7 1665 aa11.94□□□□□ -0.5
LMBR1-221ENST00000609774 CHRDL2Q6WN34 429 aa11.92□□□□□ -0.5
LMBR1-221ENST00000609774 PELP1Q8IZL8 1130 aaKnown RBP11.91□□□□□ -0.5
LMBR1-221ENST00000609774 ARAP3Q8WWN8 1544 aa11.91□□□□□ -0.5
LMBR1-221ENST00000609774 KIAA0556O60303 1618 aa11.89□□□□□ -0.51
LMBR1-221ENST00000609774 ADAMTSL3P82987 1691 aa11.88□□□□□ -0.51
LMBR1-221ENST00000609774 CD109Q6YHK3 1445 aa11.88□□□□□ -0.51
LMBR1-221ENST00000609774 PHLDB1Q86UU1 1377 aa11.87□□□□□ -0.51
LMBR1-221ENST00000609774 KIF21BO75037 1637 aa11.85□□□□□ -0.51
LMBR1-221ENST00000609774 ABCA8O94911 1581 aa11.84□□□□□ -0.51
LMBR1-221ENST00000609774 PTPRMP28827 1452 aa11.84□□□□□ -0.51
LMBR1-221ENST00000609774 RAPGEF2Q9Y4G8 1499 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 161.9 ms