RNA–Protein interactions for RNA: ENST00000608903.5

CTCFL-221, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-221ENST00000608903 RANGAP1P46060 587 aaPredicted RBP18.61■□□□□ 0.57
CTCFL-221ENST00000608903 CEP170Q5SW79 1584 aa18.6■□□□□ 0.57
CTCFL-221ENST00000608903 CTTNBP2Q8WZ74 1663 aa18.59■□□□□ 0.57
CTCFL-221ENST00000608903 NUP160Q12769 1436 aa18.57■□□□□ 0.56
CTCFL-221ENST00000608903 CLIP1P30622 1438 aa18.54■□□□□ 0.56
CTCFL-221ENST00000608903 KIAA0586Q9BVV6 1533 aa18.52■□□□□ 0.55
CTCFL-221ENST00000608903 ARHGAP35Q9NRY4 1499 aa18.5■□□□□ 0.55
CTCFL-221ENST00000608903 IQGAP2Q13576 1575 aa18.5■□□□□ 0.55
CTCFL-221ENST00000608903 ARAP1Q96P48 1450 aa18.45■□□□□ 0.54
CTCFL-221ENST00000608903 P3H3Q8IVL6 736 aa18.44■□□□□ 0.54
CTCFL-221ENST00000608903 UGGT2Q9NYU1 1516 aa18.43■□□□□ 0.54
CTCFL-221ENST00000608903 JPH4Q96JJ6 628 aa18.41■□□□□ 0.54
CTCFL-221ENST00000608903 SAMD9Q5K651 1589 aa18.41■□□□□ 0.54
CTCFL-221ENST00000608903 CLASP1Q7Z460 1538 aa18.41■□□□□ 0.54
CTCFL-221ENST00000608903 DISP1Q96F81 1524 aa18.39■□□□□ 0.53
CTCFL-221ENST00000608903 FHOD3Q2V2M9 1422 aa18.39■□□□□ 0.53
CTCFL-221ENST00000608903 EFCAB5A4FU69 1503 aa18.38■□□□□ 0.53
CTCFL-221ENST00000608903 SHROOM2Q13796 1616 aa18.35■□□□□ 0.53
CTCFL-221ENST00000608903 OSCARQ8IYS5 282 aa18.35■□□□□ 0.53
CTCFL-221ENST00000608903 KIAA0556O60303 1618 aa18.33■□□□□ 0.53
CTCFL-221ENST00000608903 VPS8Q8N3P4 1428 aa18.33■□□□□ 0.52
CTCFL-221ENST00000608903 PRG4Q92954 1404 aaPredicted RBP18.32■□□□□ 0.52
CTCFL-221ENST00000608903 ERCC6L2Q5T890 1561 aa18.32■□□□□ 0.52
CTCFL-221ENST00000608903 TTBK1Q5TCY1 1321 aaPredicted RBP18.24■□□□□ 0.51
CTCFL-221ENST00000608903 CARMIL2Q6F5E8 1435 aa18.24■□□□□ 0.51
CTCFL-221ENST00000608903 PCF11O94913 1555 aaKnown RBP18.22■□□□□ 0.51
CTCFL-221ENST00000608903 FMN1Q68DA7 1419 aa18.2■□□□□ 0.5
CTCFL-221ENST00000608903 PPARGC1BQ86YN6 1023 aaKnown RBP18.19■□□□□ 0.5
CTCFL-221ENST00000608903 CASKIN1Q8WXD9 1431 aa18.18■□□□□ 0.5
CTCFL-221ENST00000608903 PLB1Q6P1J6 1458 aa18.15■□□□□ 0.5
CTCFL-221ENST00000608903 PTPRGP23470 1445 aa18.15■□□□□ 0.5
CTCFL-221ENST00000608903 LRRIQ1Q96JM4 1722 aa18.15■□□□□ 0.5
CTCFL-221ENST00000608903 ATP1B4Q9UN42 357 aaPredicted RBP18.14■□□□□ 0.49
CTCFL-221ENST00000608903 FYCO1Q9BQS8 1478 aa18.14■□□□□ 0.49
CTCFL-221ENST00000608903 ABCA8O94911 1581 aa18.11■□□□□ 0.49
CTCFL-221ENST00000608903 RAPGEF6Q8TEU7 1601 aa18.11■□□□□ 0.49
CTCFL-221ENST00000608903 KANK4Q5T7N3 995 aaPredicted RBP18.1■□□□□ 0.49
CTCFL-221ENST00000608903 NUP153P49790 1475 aaKnown RBP18.09■□□□□ 0.49
CTCFL-221ENST00000608903 ARID3CA6NKF2 412 aa18.08■□□□□ 0.49
CTCFL-221ENST00000608903 ARHGEF11O15085 1522 aa18.06■□□□□ 0.48
CTCFL-221ENST00000608903 TIAM1Q13009 1591 aa18.06■□□□□ 0.48
CTCFL-221ENST00000608903 HECW1Q76N89 1606 aa18.06■□□□□ 0.48
CTCFL-221ENST00000608903 EPRSP07814 1512 aaKnown RBP18.05■□□□□ 0.48
CTCFL-221ENST00000608903 CDK13Q14004 1512 aaKnown RBP18.05■□□□□ 0.48
CTCFL-221ENST00000608903 APLP2Q06481 763 aa18.05■□□□□ 0.48
CTCFL-221ENST00000608903 MAP3K1Q13233 1512 aa18.04■□□□□ 0.48
CTCFL-221ENST00000608903 UACAQ9BZF9 1416 aa18.04■□□□□ 0.48
CTCFL-221ENST00000608903 CFAP43Q8NDM7 1665 aa18.04■□□□□ 0.48
CTCFL-221ENST00000608903 RIMBP3CA6NJZ7 1639 aa18.02■□□□□ 0.47
CTCFL-221ENST00000608903 RIMBP3BA6NNM3 1639 aa18.02■□□□□ 0.47
CTCFL-221ENST00000608903 RIMBP3Q9UFD9 1639 aa18.02■□□□□ 0.47
CTCFL-221ENST00000608903 MAGI3Q5TCQ9 1506 aa18■□□□□ 0.47
CTCFL-221ENST00000608903 ATP10BO94823 1461 aa18■□□□□ 0.47
CTCFL-221ENST00000608903 LRRC9Q6ZRR7 1453 aa17.99■□□□□ 0.47
CTCFL-221ENST00000608903 ABCC2Q92887 1545 aa17.99■□□□□ 0.47
CTCFL-221ENST00000608903 CCDC18Q5T9S5 1454 aa17.98■□□□□ 0.47
CTCFL-221ENST00000608903 UHRF1BP1LA0JNW5 1464 aa17.97■□□□□ 0.47
CTCFL-221ENST00000608903 ADCY10Q96PN6 1610 aa17.96■□□□□ 0.47
CTCFL-221ENST00000608903 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.92■□□□□ 0.46
CTCFL-221ENST00000608903 HNRNPUL2Q1KMD3 747 aaKnown RBP17.92■□□□□ 0.46
CTCFL-221ENST00000608903 CYB5RLQ6IPT4 315 aa17.92■□□□□ 0.46
CTCFL-221ENST00000608903 KDM5BQ9UGL1 1544 aa17.91■□□□□ 0.46
CTCFL-221ENST00000608903 MTUS2Q5JR59 1369 aa17.9■□□□□ 0.46
CTCFL-221ENST00000608903 ZCCHC11Q5TAX3 1644 aaKnown RBP17.89■□□□□ 0.46
CTCFL-221ENST00000608903 EHBP1L1Q8N3D4 1523 aa17.87■□□□□ 0.45
CTCFL-221ENST00000608903 PHLDB1Q86UU1 1377 aa17.85■□□□□ 0.45
CTCFL-221ENST00000608903 TROQ12816 1431 aaPredicted RBP17.85■□□□□ 0.45
CTCFL-221ENST00000608903 PLEKHD1A6NEE1 506 aa17.83■□□□□ 0.45
CTCFL-221ENST00000608903 NCOA2Q15596 1464 aa17.83■□□□□ 0.45
CTCFL-221ENST00000608903 CDK11AQ9UQ88 783 aaPredicted RBP17.83■□□□□ 0.44
CTCFL-221ENST00000608903 TRIM26Q12899 539 aaPredicted RBP17.82■□□□□ 0.44
CTCFL-221ENST00000608903 KIF14Q15058 1648 aa17.82■□□□□ 0.44
CTCFL-221ENST00000608903 SUPT6HQ7KZ85 1726 aaKnown RBP17.81■□□□□ 0.44
CTCFL-221ENST00000608903 PCGF6Q9BYE7 350 aa17.77■□□□□ 0.44
CTCFL-221ENST00000608903 DNAJC5Q9H3Z4 198 aa17.77■□□□□ 0.44
CTCFL-221ENST00000608903 ABCC10Q5T3U5 1492 aa17.76■□□□□ 0.43
CTCFL-221ENST00000608903 ASXL2Q76L83 1435 aa17.75■□□□□ 0.43
CTCFL-221ENST00000608903 KCNH8Q96L42 1107 aa17.75■□□□□ 0.43
CTCFL-221ENST00000608903 RRBP1Q9P2E9 1410 aaKnown RBP17.74■□□□□ 0.43
CTCFL-221ENST00000608903 NPM1P06748 294 aaKnown RBP eCLIP17.74■□□□□ 0.43
CTCFL-221ENST00000608903 WDR7Q9Y4E6 1490 aa17.73■□□□□ 0.43
CTCFL-221ENST00000608903 MYOM3Q5VTT5 1437 aa17.72■□□□□ 0.43
CTCFL-221ENST00000608903 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.71■□□□□ 0.433e-12■■■■■ 30.2
CTCFL-221ENST00000608903 GPATCH8Q9UKJ3 1502 aaKnown RBP17.7■□□□□ 0.42
CTCFL-221ENST00000608903 FGD6Q6ZV73 1430 aa17.7■□□□□ 0.42
CTCFL-221ENST00000608903 TTC37Q6PGP7 1564 aa17.69■□□□□ 0.42
CTCFL-221ENST00000608903 CCNB3Q8WWL7 1395 aa17.69■□□□□ 0.42
CTCFL-221ENST00000608903 CDC42BPAQ5VT25 1732 aa17.68■□□□□ 0.42
CTCFL-221ENST00000608903 MAPKBP1O60336 1514 aa17.66■□□□□ 0.42
CTCFL-221ENST00000608903 ZNF644Q9H582 1327 aaPredicted RBP17.65■□□□□ 0.42
CTCFL-221ENST00000608903 PTPN23Q9H3S7 1636 aa17.64■□□□□ 0.41
CTCFL-221ENST00000608903 MIA2Q96PC5 1412 aa17.63■□□□□ 0.41
CTCFL-221ENST00000608903 CDC42BPBQ9Y5S2 1711 aa17.63■□□□□ 0.41
CTCFL-221ENST00000608903 FAM50AQ14320 339 aaKnown RBP17.63■□□□□ 0.41
CTCFL-221ENST00000608903 TCOF1Q13428 1488 aaKnown RBP17.62■□□□□ 0.41
CTCFL-221ENST00000608903 ABCA9Q8IUA7 1624 aa17.61■□□□□ 0.41
CTCFL-221ENST00000608903 CFDP1Q9UEE9 299 aaPredicted RBP17.61■□□□□ 0.41
CTCFL-221ENST00000608903 ITSN2Q9NZM3 1697 aa17.61■□□□□ 0.41
CTCFL-221ENST00000608903 PREX2Q70Z35 1606 aa17.6■□□□□ 0.41
CTCFL-221ENST00000608903 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms