RNA–Protein interactions for RNA: ENST00000608254.1

PTCHD1-AS-202, Transcript of PTCHD1 antisense RNA (head to head), humanhuman

TSL 4 BASIC

Gene PTCHD1-AS, Length 557 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-AS-202ENST00000608254 JPH4Q96JJ6 628 aa19.69■□□□□ 0.74
PTCHD1-AS-202ENST00000608254 GOLGA3Q08378 1498 aa19.65■□□□□ 0.74
PTCHD1-AS-202ENST00000608254 IQGAP2Q13576 1575 aa19.61■□□□□ 0.73
PTCHD1-AS-202ENST00000608254 ARHGEF11O15085 1522 aa19.61■□□□□ 0.73
PTCHD1-AS-202ENST00000608254 SHROOM2Q13796 1616 aa19.61■□□□□ 0.73
PTCHD1-AS-202ENST00000608254 PRG4Q92954 1404 aaPredicted RBP19.6■□□□□ 0.73
PTCHD1-AS-202ENST00000608254 UBTFP17480 764 aaKnown RBP19.6■□□□□ 0.73
PTCHD1-AS-202ENST00000608254 EHMT2Q96KQ7 1210 aa19.6■□□□□ 0.73
PTCHD1-AS-202ENST00000608254 UGGT2Q9NYU1 1516 aa19.55■□□□□ 0.72
PTCHD1-AS-202ENST00000608254 RIMBP3CA6NJZ7 1639 aa19.54■□□□□ 0.72
PTCHD1-AS-202ENST00000608254 RIMBP3BA6NNM3 1639 aa19.54■□□□□ 0.72
PTCHD1-AS-202ENST00000608254 RIMBP3Q9UFD9 1639 aa19.54■□□□□ 0.72
PTCHD1-AS-202ENST00000608254 CTTNBP2Q8WZ74 1663 aa19.53■□□□□ 0.72
PTCHD1-AS-202ENST00000608254 CARMIL2Q6F5E8 1435 aa19.53■□□□□ 0.72
PTCHD1-AS-202ENST00000608254 ERCC6L2Q5T890 1561 aa19.51■□□□□ 0.71
PTCHD1-AS-202ENST00000608254 DISP1Q96F81 1524 aa19.48■□□□□ 0.71
PTCHD1-AS-202ENST00000608254 ARAP1Q96P48 1450 aa19.48■□□□□ 0.71
PTCHD1-AS-202ENST00000608254 TNIKQ9UKE5 1360 aa19.47■□□□□ 0.71
PTCHD1-AS-202ENST00000608254 CYB5RLQ6IPT4 315 aa19.47■□□□□ 0.71
PTCHD1-AS-202ENST00000608254 LOC105371045A0A1W2PR82 267 aa19.44■□□□□ 0.7
PTCHD1-AS-202ENST00000608254 RANGAP1P46060 587 aaPredicted RBP19.44■□□□□ 0.7
PTCHD1-AS-202ENST00000608254 PTPRGP23470 1445 aa19.42■□□□□ 0.7
PTCHD1-AS-202ENST00000608254 KIAA0556O60303 1618 aa19.41■□□□□ 0.7
PTCHD1-AS-202ENST00000608254 P3H3Q8IVL6 736 aa19.39■□□□□ 0.69
PTCHD1-AS-202ENST00000608254 SAMD9Q5K651 1589 aa19.37■□□□□ 0.69
PTCHD1-AS-202ENST00000608254 EFCAB5A4FU69 1503 aa19.37■□□□□ 0.69
PTCHD1-AS-202ENST00000608254 TTBK1Q5TCY1 1321 aaPredicted RBP19.36■□□□□ 0.69
PTCHD1-AS-202ENST00000608254 ARHGAP35Q9NRY4 1499 aa19.32■□□□□ 0.68
PTCHD1-AS-202ENST00000608254 CLIP1P30622 1438 aa19.31■□□□□ 0.68
PTCHD1-AS-202ENST00000608254 FHOD3Q2V2M9 1422 aa19.31■□□□□ 0.68
PTCHD1-AS-202ENST00000608254 UACAQ9BZF9 1416 aa19.29■□□□□ 0.68
PTCHD1-AS-202ENST00000608254 CEP162Q5TB80 1403 aa19.27■□□□□ 0.68
PTCHD1-AS-202ENST00000608254 UHRF1BP1LA0JNW5 1464 aa19.25■□□□□ 0.67
PTCHD1-AS-202ENST00000608254 PLB1Q6P1J6 1458 aa19.23■□□□□ 0.67
PTCHD1-AS-202ENST00000608254 NPM1P06748 294 aaKnown RBP eCLIP19.23■□□□□ 0.67
PTCHD1-AS-202ENST00000608254 FMN1Q68DA7 1419 aa19.23■□□□□ 0.67
PTCHD1-AS-202ENST00000608254 ABCC2Q92887 1545 aa19.21■□□□□ 0.67
PTCHD1-AS-202ENST00000608254 ABCA8O94911 1581 aa19.2■□□□□ 0.66
PTCHD1-AS-202ENST00000608254 ADCY10Q96PN6 1610 aa19.2■□□□□ 0.66
PTCHD1-AS-202ENST00000608254 KDM5BQ9UGL1 1544 aa19.15■□□□□ 0.66
PTCHD1-AS-202ENST00000608254 RAPGEF6Q8TEU7 1601 aa19.13■□□□□ 0.65
PTCHD1-AS-202ENST00000608254 NUP153P49790 1475 aaKnown RBP19.1■□□□□ 0.65
PTCHD1-AS-202ENST00000608254 CASKIN1Q8WXD9 1431 aa19.09■□□□□ 0.65
PTCHD1-AS-202ENST00000608254 ATP1B4Q9UN42 357 aaPredicted RBP19.09■□□□□ 0.65
PTCHD1-AS-202ENST00000608254 ATP10BO94823 1461 aa19.09■□□□□ 0.65
PTCHD1-AS-202ENST00000608254 MAPKBP1O60336 1514 aa19.07■□□□□ 0.64
PTCHD1-AS-202ENST00000608254 ARID3CA6NKF2 412 aa19.07■□□□□ 0.64
PTCHD1-AS-202ENST00000608254 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.05■□□□□ 0.64
PTCHD1-AS-202ENST00000608254 HNRNPUL2Q1KMD3 747 aaKnown RBP19.05■□□□□ 0.64
PTCHD1-AS-202ENST00000608254 FYCO1Q9BQS8 1478 aa19.04■□□□□ 0.64
PTCHD1-AS-202ENST00000608254 ASXL2Q76L83 1435 aa19.04■□□□□ 0.64
PTCHD1-AS-202ENST00000608254 ZCCHC11Q5TAX3 1644 aaKnown RBP19.03■□□□□ 0.64
PTCHD1-AS-202ENST00000608254 HECW1Q76N89 1606 aa19.03■□□□□ 0.64
PTCHD1-AS-202ENST00000608254 VPS8Q8N3P4 1428 aa19.03■□□□□ 0.64
PTCHD1-AS-202ENST00000608254 PCF11O94913 1555 aaKnown RBP19.02■□□□□ 0.63
PTCHD1-AS-202ENST00000608254 EPRSP07814 1512 aaKnown RBP19.01■□□□□ 0.63
PTCHD1-AS-202ENST00000608254 PLEKHD1A6NEE1 506 aa18.99■□□□□ 0.63
PTCHD1-AS-202ENST00000608254 TRHP20396 242 aaPredicted RBP18.99■□□□□ 0.63
PTCHD1-AS-202ENST00000608254 CCDC18Q5T9S5 1454 aa18.98■□□□□ 0.63
PTCHD1-AS-202ENST00000608254 CDK11AQ9UQ88 783 aaPredicted RBP18.98■□□□□ 0.63
PTCHD1-AS-202ENST00000608254 WDR7Q9Y4E6 1490 aa18.97■□□□□ 0.63
PTCHD1-AS-202ENST00000608254 ABCC10Q5T3U5 1492 aa18.97■□□□□ 0.63
PTCHD1-AS-202ENST00000608254 CDK13Q14004 1512 aaKnown RBP18.96■□□□□ 0.63
PTCHD1-AS-202ENST00000608254 FAM69CQ0P6D2 419 aa18.95■□□□□ 0.62
PTCHD1-AS-202ENST00000608254 KCNH8Q96L42 1107 aa18.93■□□□□ 0.62
PTCHD1-AS-202ENST00000608254 DIP2BQ9P265 1576 aa18.89■□□□□ 0.61
PTCHD1-AS-202ENST00000608254 GLI2P10070 1586 aa18.88■□□□□ 0.61
PTCHD1-AS-202ENST00000608254 TROQ12816 1431 aaPredicted RBP18.87■□□□□ 0.61
PTCHD1-AS-202ENST00000608254 APLP2Q06481 763 aa18.86■□□□□ 0.61
PTCHD1-AS-202ENST00000608254 LRRIQ1Q96JM4 1722 aa18.86■□□□□ 0.61
PTCHD1-AS-202ENST00000608254 MAP3K1Q13233 1512 aa18.84■□□□□ 0.61
PTCHD1-AS-202ENST00000608254 MTUS2Q5JR59 1369 aa18.82■□□□□ 0.6
PTCHD1-AS-202ENST00000608254 MAGI3Q5TCQ9 1506 aa18.81■□□□□ 0.6
PTCHD1-AS-202ENST00000608254 TIAM1Q13009 1591 aa18.81■□□□□ 0.6
PTCHD1-AS-202ENST00000608254 CD109Q6YHK3 1445 aa18.8■□□□□ 0.6
PTCHD1-AS-202ENST00000608254 KIF13AQ9H1H9 1805 aa18.79■□□□□ 0.6
PTCHD1-AS-202ENST00000608254 ABCA9Q8IUA7 1624 aa18.77■□□□□ 0.6
PTCHD1-AS-202ENST00000608254 CFAP43Q8NDM7 1665 aa18.76■□□□□ 0.59
PTCHD1-AS-202ENST00000608254 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.76■□□□□ 0.59
PTCHD1-AS-202ENST00000608254 KANK4Q5T7N3 995 aaPredicted RBP18.76■□□□□ 0.59
PTCHD1-AS-202ENST00000608254 LRRC9Q6ZRR7 1453 aa18.76■□□□□ 0.59
PTCHD1-AS-202ENST00000608254 EHBP1L1Q8N3D4 1523 aa18.75■□□□□ 0.59
PTCHD1-AS-202ENST00000608254 KIF14Q15058 1648 aa18.75■□□□□ 0.59
PTCHD1-AS-202ENST00000608254 MAP3K4Q9Y6R4 1608 aa18.75■□□□□ 0.59
PTCHD1-AS-202ENST00000608254 TEX14Q8IWB6 1497 aa18.71■□□□□ 0.59
PTCHD1-AS-202ENST00000608254 PLCH2O75038 1416 aa18.71■□□□□ 0.59
PTCHD1-AS-202ENST00000608254 TTC37Q6PGP7 1564 aa18.7■□□□□ 0.58
PTCHD1-AS-202ENST00000608254 CCNB3Q8WWL7 1395 aa18.68■□□□□ 0.58
PTCHD1-AS-202ENST00000608254 EFCAB2Q5VUJ9 269 aa18.67■□□□□ 0.58
PTCHD1-AS-202ENST00000608254 PHLDB1Q86UU1 1377 aa18.67■□□□□ 0.58
PTCHD1-AS-202ENST00000608254 NCOA2Q15596 1464 aa18.66■□□□□ 0.58
PTCHD1-AS-202ENST00000608254 ARAP3Q8WWN8 1544 aa18.65■□□□□ 0.58
PTCHD1-AS-202ENST00000608254 NEO1Q92859 1461 aa18.65■□□□□ 0.58
PTCHD1-AS-202ENST00000608254 GPATCH8Q9UKJ3 1502 aaKnown RBP18.64■□□□□ 0.58
PTCHD1-AS-202ENST00000608254 PPRC1Q5VV67 1664 aaKnown RBP18.64■□□□□ 0.57
PTCHD1-AS-202ENST00000608254 SUPT6HQ7KZ85 1726 aaKnown RBP18.63■□□□□ 0.57
PTCHD1-AS-202ENST00000608254 FANCAO15360 1455 aa18.63■□□□□ 0.57
PTCHD1-AS-202ENST00000608254 CFDP1Q9UEE9 299 aaPredicted RBP18.62■□□□□ 0.57
PTCHD1-AS-202ENST00000608254 TSPOAP1O95153 1857 aa18.62■□□□□ 0.57
PTCHD1-AS-202ENST00000608254 ARHGAP5Q13017 1502 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms