RNA–Protein interactions for RNA: ENST00000608108.1

CTCFL-214, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 1,628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-214ENST00000608108 CHMP7Q8WUX9 453 aaPredicted RBP18.06■□□□□ 0.48
CTCFL-214ENST00000608108 FBLN2P98095 1184 aa18.05■□□□□ 0.48
CTCFL-214ENST00000608108 CTTNBP2Q8WZ74 1663 aa18.04■□□□□ 0.48
CTCFL-214ENST00000608108 TNIKQ9UKE5 1360 aa18.01■□□□□ 0.47
CTCFL-214ENST00000608108 PLPPR3Q6T4P5 718 aa17.98■□□□□ 0.47
CTCFL-214ENST00000608108 CEP170Q5SW79 1584 aa17.98■□□□□ 0.47
CTCFL-214ENST00000608108 NUP160Q12769 1436 aa17.96■□□□□ 0.47
CTCFL-214ENST00000608108 IQGAP2Q13576 1575 aa17.92■□□□□ 0.46
CTCFL-214ENST00000608108 CEP162Q5TB80 1403 aa17.92■□□□□ 0.46
CTCFL-214ENST00000608108 KIAA0586Q9BVV6 1533 aa17.91■□□□□ 0.46
CTCFL-214ENST00000608108 RANGAP1P46060 587 aaPredicted RBP17.88■□□□□ 0.45
CTCFL-214ENST00000608108 CLIP1P30622 1438 aa17.87■□□□□ 0.45
CTCFL-214ENST00000608108 CLASP1Q7Z460 1538 aa17.84■□□□□ 0.45
CTCFL-214ENST00000608108 MSH5O43196 834 aa17.82■□□□□ 0.44
CTCFL-214ENST00000608108 EFCAB5A4FU69 1503 aa17.82■□□□□ 0.44
CTCFL-214ENST00000608108 UGGT2Q9NYU1 1516 aa17.82■□□□□ 0.44
CTCFL-214ENST00000608108 SAMD9Q5K651 1589 aa17.8■□□□□ 0.44
CTCFL-214ENST00000608108 ARHGAP35Q9NRY4 1499 aa17.8■□□□□ 0.44
CTCFL-214ENST00000608108 OSCARQ8IYS5 282 aa17.79■□□□□ 0.44
CTCFL-214ENST00000608108 PPP6R1Q9UPN7 881 aa17.79■□□□□ 0.44
CTCFL-214ENST00000608108 SHROOM2Q13796 1616 aa17.79■□□□□ 0.44
CTCFL-214ENST00000608108 PIAS4Q8N2W9 510 aaPredicted RBP17.77■□□□□ 0.44
CTCFL-214ENST00000608108 JPH4Q96JJ6 628 aa17.76■□□□□ 0.43
CTCFL-214ENST00000608108 KIAA0556O60303 1618 aa17.75■□□□□ 0.43
CTCFL-214ENST00000608108 ARAP1Q96P48 1450 aa17.74■□□□□ 0.43
CTCFL-214ENST00000608108 DISP1Q96F81 1524 aa17.74■□□□□ 0.43
CTCFL-214ENST00000608108 FHOD3Q2V2M9 1422 aa17.72■□□□□ 0.43
CTCFL-214ENST00000608108 PRG4Q92954 1404 aaPredicted RBP17.71■□□□□ 0.43
CTCFL-214ENST00000608108 P3H3Q8IVL6 736 aa17.71■□□□□ 0.43
CTCFL-214ENST00000608108 CARMIL2Q6F5E8 1435 aa17.71■□□□□ 0.42
CTCFL-214ENST00000608108 ADRA2BP18089 450 aa17.7■□□□□ 0.42
CTCFL-214ENST00000608108 ERCC6L2Q5T890 1561 aa17.66■□□□□ 0.42
CTCFL-214ENST00000608108 VPS8Q8N3P4 1428 aa17.66■□□□□ 0.42
CTCFL-214ENST00000608108 POTEDQ86YR6 584 aa17.65■□□□□ 0.42
CTCFL-214ENST00000608108 FMN1Q68DA7 1419 aa17.63■□□□□ 0.41
CTCFL-214ENST00000608108 PCF11O94913 1555 aaKnown RBP17.59■□□□□ 0.41
CTCFL-214ENST00000608108 TTBK1Q5TCY1 1321 aaPredicted RBP17.58■□□□□ 0.41
CTCFL-214ENST00000608108 PTPRGP23470 1445 aa17.55■□□□□ 0.4
CTCFL-214ENST00000608108 FYCO1Q9BQS8 1478 aa17.55■□□□□ 0.4
CTCFL-214ENST00000608108 CASKIN1Q8WXD9 1431 aa17.54■□□□□ 0.4
CTCFL-214ENST00000608108 ARHGEF11O15085 1522 aa17.54■□□□□ 0.4
CTCFL-214ENST00000608108 RAPGEF6Q8TEU7 1601 aa17.53■□□□□ 0.4
CTCFL-214ENST00000608108 HECW1Q76N89 1606 aa17.52■□□□□ 0.4
CTCFL-214ENST00000608108 PLB1Q6P1J6 1458 aa17.51■□□□□ 0.39
CTCFL-214ENST00000608108 RIMBP3CA6NJZ7 1639 aa17.5■□□□□ 0.39
CTCFL-214ENST00000608108 RIMBP3BA6NNM3 1639 aa17.5■□□□□ 0.39
CTCFL-214ENST00000608108 RIMBP3Q9UFD9 1639 aa17.5■□□□□ 0.39
CTCFL-214ENST00000608108 ABCA8O94911 1581 aa17.5■□□□□ 0.39
CTCFL-214ENST00000608108 LRRIQ1Q96JM4 1722 aa17.49■□□□□ 0.39
CTCFL-214ENST00000608108 ATP1B4Q9UN42 357 aaPredicted RBP17.48■□□□□ 0.39
CTCFL-214ENST00000608108 UACAQ9BZF9 1416 aa17.46■□□□□ 0.39
CTCFL-214ENST00000608108 NUP153P49790 1475 aaKnown RBP17.46■□□□□ 0.39
CTCFL-214ENST00000608108 CFAP43Q8NDM7 1665 aa17.45■□□□□ 0.38
CTCFL-214ENST00000608108 ABCC2Q92887 1545 aa17.44■□□□□ 0.38
CTCFL-214ENST00000608108 APLP2Q06481 763 aa17.44■□□□□ 0.38
CTCFL-214ENST00000608108 TIAM1Q13009 1591 aa17.44■□□□□ 0.38
CTCFL-214ENST00000608108 CCDC18Q5T9S5 1454 aa17.43■□□□□ 0.38
CTCFL-214ENST00000608108 EPRSP07814 1512 aaKnown RBP17.43■□□□□ 0.38
CTCFL-214ENST00000608108 MAP3K1Q13233 1512 aa17.41■□□□□ 0.38
CTCFL-214ENST00000608108 ADCY10Q96PN6 1610 aa17.4■□□□□ 0.38
CTCFL-214ENST00000608108 CDK13Q14004 1512 aaKnown RBP17.4■□□□□ 0.38
CTCFL-214ENST00000608108 UHRF1BP1LA0JNW5 1464 aa17.4■□□□□ 0.38
CTCFL-214ENST00000608108 ARID3CA6NKF2 412 aa17.39■□□□□ 0.38
CTCFL-214ENST00000608108 ATP10BO94823 1461 aa17.34■□□□□ 0.37
CTCFL-214ENST00000608108 PPARGC1BQ86YN6 1023 aaKnown RBP17.34■□□□□ 0.37
CTCFL-214ENST00000608108 ZCCHC11Q5TAX3 1644 aaKnown RBP17.34■□□□□ 0.37
CTCFL-214ENST00000608108 LRRC9Q6ZRR7 1453 aa17.34■□□□□ 0.37
CTCFL-214ENST00000608108 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.33■□□□□ 0.37
CTCFL-214ENST00000608108 HNRNPUL2Q1KMD3 747 aaKnown RBP17.33■□□□□ 0.37
CTCFL-214ENST00000608108 KDM5BQ9UGL1 1544 aa17.32■□□□□ 0.36
CTCFL-214ENST00000608108 CYB5RLQ6IPT4 315 aa17.32■□□□□ 0.36
CTCFL-214ENST00000608108 KANK4Q5T7N3 995 aaPredicted RBP17.32■□□□□ 0.36
CTCFL-214ENST00000608108 MAGI3Q5TCQ9 1506 aa17.31■□□□□ 0.36
CTCFL-214ENST00000608108 EHBP1L1Q8N3D4 1523 aa17.31■□□□□ 0.36
CTCFL-214ENST00000608108 MTUS2Q5JR59 1369 aa17.29■□□□□ 0.36
CTCFL-214ENST00000608108 CDK11AQ9UQ88 783 aaPredicted RBP17.28■□□□□ 0.36
CTCFL-214ENST00000608108 DNAJC5Q9H3Z4 198 aa17.26■□□□□ 0.35
CTCFL-214ENST00000608108 SUPT6HQ7KZ85 1726 aaKnown RBP17.25■□□□□ 0.35
CTCFL-214ENST00000608108 TROQ12816 1431 aaPredicted RBP17.24■□□□□ 0.35
CTCFL-214ENST00000608108 PLEKHD1A6NEE1 506 aa17.23■□□□□ 0.35
CTCFL-214ENST00000608108 NPM1P06748 294 aaKnown RBP eCLIP17.23■□□□□ 0.35
CTCFL-214ENST00000608108 KIF14Q15058 1648 aa17.21■□□□□ 0.35
CTCFL-214ENST00000608108 NCOA2Q15596 1464 aa17.19■□□□□ 0.34
CTCFL-214ENST00000608108 WDR7Q9Y4E6 1490 aa17.19■□□□□ 0.34
CTCFL-214ENST00000608108 ASXL2Q76L83 1435 aa17.19■□□□□ 0.34
CTCFL-214ENST00000608108 MAPKBP1O60336 1514 aa17.17■□□□□ 0.34
CTCFL-214ENST00000608108 PHLDB1Q86UU1 1377 aa17.15■□□□□ 0.34
CTCFL-214ENST00000608108 TTC37Q6PGP7 1564 aa17.12■□□□□ 0.33
CTCFL-214ENST00000608108 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.11■□□□□ 0.333e-12■■■■■ 30.2
CTCFL-214ENST00000608108 KCNH8Q96L42 1107 aa17.11■□□□□ 0.33
CTCFL-214ENST00000608108 ABCC10Q5T3U5 1492 aa17.11■□□□□ 0.33
CTCFL-214ENST00000608108 ITSN2Q9NZM3 1697 aa17.11■□□□□ 0.33
CTCFL-214ENST00000608108 MYOM3Q5VTT5 1437 aa17.1■□□□□ 0.33
CTCFL-214ENST00000608108 CCNB3Q8WWL7 1395 aa17.1■□□□□ 0.33
CTCFL-214ENST00000608108 CDC42BPAQ5VT25 1732 aa17.1■□□□□ 0.33
CTCFL-214ENST00000608108 MYO5CQ9NQX4 1742 aa17.08■□□□□ 0.32
CTCFL-214ENST00000608108 ABCA9Q8IUA7 1624 aa17.07■□□□□ 0.32
CTCFL-214ENST00000608108 GPATCH8Q9UKJ3 1502 aaKnown RBP17.06■□□□□ 0.32
CTCFL-214ENST00000608108 FGD6Q6ZV73 1430 aa17.06■□□□□ 0.32
CTCFL-214ENST00000608108 RRBP1Q9P2E9 1410 aaKnown RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms