RNA–Protein interactions for RNA: ENST00000607448.5

LINC01001-203, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 1,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-203ENST00000607448 PRG4Q92954 1404 aaPredicted RBP17.74■□□□□ 0.43
LINC01001-203ENST00000607448 JPH4Q96JJ6 628 aa17.71■□□□□ 0.43
LINC01001-203ENST00000607448 KIAA0586Q9BVV6 1533 aa17.71■□□□□ 0.42
LINC01001-203ENST00000607448 IQGAP2Q13576 1575 aa17.63■□□□□ 0.41
LINC01001-203ENST00000607448 RAPGEF2Q9Y4G8 1499 aa17.63■□□□□ 0.41
LINC01001-203ENST00000607448 TRHP20396 242 aaPredicted RBP17.63■□□□□ 0.41
LINC01001-203ENST00000607448 CTTNBP2Q8WZ74 1663 aa17.61■□□□□ 0.41
LINC01001-203ENST00000607448 ADCY10Q96PN6 1610 aa17.59■□□□□ 0.41
LINC01001-203ENST00000607448 KIF13AQ9H1H9 1805 aa17.54■□□□□ 0.4
LINC01001-203ENST00000607448 DISP1Q96F81 1524 aa17.54■□□□□ 0.4
LINC01001-203ENST00000607448 PRXQ9BXM0 1461 aa17.54■□□□□ 0.4
LINC01001-203ENST00000607448 UGGT2Q9NYU1 1516 aa17.51■□□□□ 0.39
LINC01001-203ENST00000607448 KIAA0556O60303 1618 aa17.5■□□□□ 0.39
LINC01001-203ENST00000607448 TTBK1Q5TCY1 1321 aaPredicted RBP17.49■□□□□ 0.39
LINC01001-203ENST00000607448 CARMIL2Q6F5E8 1435 aa17.48■□□□□ 0.39
LINC01001-203ENST00000607448 PTPRGP23470 1445 aa17.46■□□□□ 0.39
LINC01001-203ENST00000607448 TNIKQ9UKE5 1360 aa17.46■□□□□ 0.39
LINC01001-203ENST00000607448 MAPKBP1O60336 1514 aa17.45■□□□□ 0.38
LINC01001-203ENST00000607448 CSRNP3Q8WYN3 585 aa17.42■□□□□ 0.38
LINC01001-203ENST00000607448 DIP2BQ9P265 1576 aa17.41■□□□□ 0.38
LINC01001-203ENST00000607448 CHIC1Q5VXU3 224 aa17.4■□□□□ 0.38
LINC01001-203ENST00000607448 FAM9AQ8IZU1 332 aaPredicted RBP17.4■□□□□ 0.38
LINC01001-203ENST00000607448 EEA1Q15075 1411 aa17.38■□□□□ 0.37
LINC01001-203ENST00000607448 ABCC10Q5T3U5 1492 aa17.38■□□□□ 0.37
LINC01001-203ENST00000607448 ABCC2Q92887 1545 aa17.37■□□□□ 0.37
LINC01001-203ENST00000607448 NPM1P06748 294 aaKnown RBP eCLIP17.36■□□□□ 0.37
LINC01001-203ENST00000607448 UACAQ9BZF9 1416 aa17.36■□□□□ 0.37
LINC01001-203ENST00000607448 UHRF1BP1LA0JNW5 1464 aa17.36■□□□□ 0.37
LINC01001-203ENST00000607448 ZCCHC11Q5TAX3 1644 aaKnown RBP17.35■□□□□ 0.37
LINC01001-203ENST00000607448 KIF21BO75037 1637 aa17.34■□□□□ 0.37
LINC01001-203ENST00000607448 TSPOAP1O95153 1857 aa17.34■□□□□ 0.37
LINC01001-203ENST00000607448 GOLGA3Q08378 1498 aa17.33■□□□□ 0.37
LINC01001-203ENST00000607448 SAMD9Q5K651 1589 aa17.33■□□□□ 0.36
LINC01001-203ENST00000607448 PLB1Q6P1J6 1458 aa17.33■□□□□ 0.36
LINC01001-203ENST00000607448 FAM69CQ0P6D2 419 aa17.31■□□□□ 0.36
LINC01001-203ENST00000607448 KDM5BQ9UGL1 1544 aa17.31■□□□□ 0.36
LINC01001-203ENST00000607448 ABCA8O94911 1581 aa17.3■□□□□ 0.36
LINC01001-203ENST00000607448 ASXL2Q76L83 1435 aa17.29■□□□□ 0.36
LINC01001-203ENST00000607448 P3H3Q8IVL6 736 aa17.26■□□□□ 0.35
LINC01001-203ENST00000607448 PPRC1Q5VV67 1664 aaKnown RBP17.25■□□□□ 0.35
LINC01001-203ENST00000607448 RANGAP1P46060 587 aaPredicted RBP17.23■□□□□ 0.35
LINC01001-203ENST00000607448 EHMT2Q96KQ7 1210 aa17.23■□□□□ 0.35
LINC01001-203ENST00000607448 GLI2P10070 1586 aa17.22■□□□□ 0.35
LINC01001-203ENST00000607448 MAP3K4Q9Y6R4 1608 aa17.2■□□□□ 0.34
LINC01001-203ENST00000607448 EPRSP07814 1512 aaKnown RBP17.2■□□□□ 0.34
LINC01001-203ENST00000607448 RAPGEF6Q8TEU7 1601 aa17.19■□□□□ 0.34
LINC01001-203ENST00000607448 FHOD3Q2V2M9 1422 aa17.18■□□□□ 0.34
LINC01001-203ENST00000607448 WDR7Q9Y4E6 1490 aa17.17■□□□□ 0.34
LINC01001-203ENST00000607448 KDM6BO15054 1643 aa17.16■□□□□ 0.34
LINC01001-203ENST00000607448 ARID3CA6NKF2 412 aa17.15■□□□□ 0.34
LINC01001-203ENST00000607448 EFCAB5A4FU69 1503 aa17.14■□□□□ 0.33
LINC01001-203ENST00000607448 ATP10BO94823 1461 aa17.12■□□□□ 0.33
LINC01001-203ENST00000607448 CFAP43Q8NDM7 1665 aa17.11■□□□□ 0.33
LINC01001-203ENST00000607448 NUP153P49790 1475 aaKnown RBP17.1■□□□□ 0.33
LINC01001-203ENST00000607448 UBTFP17480 764 aaKnown RBP17.1■□□□□ 0.33
LINC01001-203ENST00000607448 ARHGAP35Q9NRY4 1499 aa17.07■□□□□ 0.32
LINC01001-203ENST00000607448 KCNH8Q96L42 1107 aa17.06■□□□□ 0.32
LINC01001-203ENST00000607448 COL17A1Q9UMD9 1497 aaPredicted RBP17.04■□□□□ 0.32
LINC01001-203ENST00000607448 LRRIQ1Q96JM4 1722 aa17.02■□□□□ 0.32
LINC01001-203ENST00000607448 ABCA9Q8IUA7 1624 aa17.02■□□□□ 0.31
LINC01001-203ENST00000607448 TEX14Q8IWB6 1497 aa17.01■□□□□ 0.31
LINC01001-203ENST00000607448 CDK13Q14004 1512 aaKnown RBP17■□□□□ 0.31
LINC01001-203ENST00000607448 CD109Q6YHK3 1445 aa17■□□□□ 0.31
LINC01001-203ENST00000607448 MAGI3Q5TCQ9 1506 aa16.99■□□□□ 0.31
LINC01001-203ENST00000607448 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.98■□□□□ 0.31
LINC01001-203ENST00000607448 HNRNPUL2Q1KMD3 747 aaKnown RBP16.98■□□□□ 0.31
LINC01001-203ENST00000607448 HECW1Q76N89 1606 aa16.97■□□□□ 0.31
LINC01001-203ENST00000607448 FMN1Q68DA7 1419 aa16.94■□□□□ 0.3
LINC01001-203ENST00000607448 TTC37Q6PGP7 1564 aa16.93■□□□□ 0.3
LINC01001-203ENST00000607448 PCF11O94913 1555 aaKnown RBP16.92■□□□□ 0.3
LINC01001-203ENST00000607448 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.91■□□□□ 0.3
LINC01001-203ENST00000607448 ATP1B4Q9UN42 357 aaPredicted RBP16.88■□□□□ 0.29
LINC01001-203ENST00000607448 PLEKHD1A6NEE1 506 aa16.87■□□□□ 0.29
LINC01001-203ENST00000607448 KIF14Q15058 1648 aa16.86■□□□□ 0.29
LINC01001-203ENST00000607448 ARAP3Q8WWN8 1544 aa16.86■□□□□ 0.29
LINC01001-203ENST00000607448 FRMPD1Q5SYB0 1578 aa16.85■□□□□ 0.29
LINC01001-203ENST00000607448 CLIP1P30622 1438 aa16.85■□□□□ 0.29
LINC01001-203ENST00000607448 AEBP2Q6ZN18 517 aaPredicted RBP16.84■□□□□ 0.29
LINC01001-203ENST00000607448 NEO1Q92859 1461 aa16.82■□□□□ 0.28
LINC01001-203ENST00000607448 KDM4FA0A1W2PPD8 638 aa16.82■□□□□ 0.28
LINC01001-203ENST00000607448 MYO5CQ9NQX4 1742 aa16.82■□□□□ 0.28
LINC01001-203ENST00000607448 CASKIN1Q8WXD9 1431 aa16.82■□□□□ 0.28
LINC01001-203ENST00000607448 RICTORQ6R327 1708 aa16.81■□□□□ 0.28
LINC01001-203ENST00000607448 CFAP74Q9C0B2 1584 aa16.8■□□□□ 0.28
LINC01001-203ENST00000607448 FANCAO15360 1455 aa16.78■□□□□ 0.28
LINC01001-203ENST00000607448 ADGRL1O94910 1474 aa16.78■□□□□ 0.28
LINC01001-203ENST00000607448 FYCO1Q9BQS8 1478 aa16.78■□□□□ 0.28
LINC01001-203ENST00000607448 RAPGEF3O95398 923 aa16.77■□□□□ 0.28
LINC01001-203ENST00000607448 TROQ12816 1431 aaPredicted RBP16.77■□□□□ 0.27
LINC01001-203ENST00000607448 CCDC18Q5T9S5 1454 aa16.77■□□□□ 0.27
LINC01001-203ENST00000607448 PHLDB1Q86UU1 1377 aa16.75■□□□□ 0.27
LINC01001-203ENST00000607448 CDC42BPBQ9Y5S2 1711 aa16.75■□□□□ 0.27
LINC01001-203ENST00000607448 CEP162Q5TB80 1403 aa16.75■□□□□ 0.27
LINC01001-203ENST00000607448 AKNAQ7Z591 1439 aa16.75■□□□□ 0.27
LINC01001-203ENST00000607448 PLCH2O75038 1416 aa16.73■□□□□ 0.27
LINC01001-203ENST00000607448 LOC105371045A0A1W2PR82 267 aa16.72■□□□□ 0.27
LINC01001-203ENST00000607448 CDC42BPAQ5VT25 1732 aa16.72■□□□□ 0.27
LINC01001-203ENST00000607448 CDK11AQ9UQ88 783 aaPredicted RBP16.72■□□□□ 0.27
LINC01001-203ENST00000607448 PREX2Q70Z35 1606 aa16.71■□□□□ 0.27
LINC01001-203ENST00000607448 DENND4BO75064 1496 aaPredicted RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms