RNA–Protein interactions for RNA: ENST00000606878.1

LINC00240-203, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best)

Gene LINC00240, Length 927 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-203ENST00000606878 PRG4Q92954 1404 aaPredicted RBP27.84■■■□□ 2.05
LINC00240-203ENST00000606878 SHROOM2Q13796 1616 aa27.79■■■□□ 2.04
LINC00240-203ENST00000606878 RAPGEF2Q9Y4G8 1499 aa27.79■■■□□ 2.04
LINC00240-203ENST00000606878 ERCC6L2Q5T890 1561 aa27.77■■■□□ 2.04
LINC00240-203ENST00000606878 CHIC1Q5VXU3 224 aa27.76■■■□□ 2.03
LINC00240-203ENST00000606878 CSRNP3Q8WYN3 585 aa27.74■■■□□ 2.03
LINC00240-203ENST00000606878 TRHP20396 242 aaPredicted RBP27.66■■■□□ 2.02
LINC00240-203ENST00000606878 PRXQ9BXM0 1461 aa27.64■■■□□ 2.01
LINC00240-203ENST00000606878 EEA1Q15075 1411 aa27.62■■■□□ 2.01
LINC00240-203ENST00000606878 FAM9AQ8IZU1 332 aaPredicted RBP27.62■■■□□ 2.01
LINC00240-203ENST00000606878 CARMIL2Q6F5E8 1435 aa27.59■■■□□ 2.01
LINC00240-203ENST00000606878 IQGAP2Q13576 1575 aa27.56■■■□□ 2
LINC00240-203ENST00000606878 PTPRGP23470 1445 aa27.54■■■□□ 2
LINC00240-203ENST00000606878 TTBK1Q5TCY1 1321 aaPredicted RBP27.54■■■□□ 2
LINC00240-203ENST00000606878 NPM1P06748 294 aaKnown RBP eCLIP27.53■■■□□ 2
LINC00240-203ENST00000606878 TNIKQ9UKE5 1360 aa27.51■■□□□ 1.99
LINC00240-203ENST00000606878 UGGT2Q9NYU1 1516 aa27.45■■□□□ 1.98
LINC00240-203ENST00000606878 DISP1Q96F81 1524 aa27.42■■□□□ 1.98
LINC00240-203ENST00000606878 GOLGA3Q08378 1498 aa27.36■■□□□ 1.97
LINC00240-203ENST00000606878 CTTNBP2Q8WZ74 1663 aa27.33■■□□□ 1.97
LINC00240-203ENST00000606878 AEBP2Q6ZN18 517 aaPredicted RBP27.31■■□□□ 1.96
LINC00240-203ENST00000606878 UACAQ9BZF9 1416 aa27.3■■□□□ 1.96
LINC00240-203ENST00000606878 P3H3Q8IVL6 736 aa27.28■■□□□ 1.96
LINC00240-203ENST00000606878 KIAA0556O60303 1618 aa27.27■■□□□ 1.96
LINC00240-203ENST00000606878 ADCY10Q96PN6 1610 aa27.27■■□□□ 1.96
LINC00240-203ENST00000606878 UBTFP17480 764 aaKnown RBP27.27■■□□□ 1.96
LINC00240-203ENST00000606878 EHMT2Q96KQ7 1210 aa27.27■■□□□ 1.96
LINC00240-203ENST00000606878 RANGAP1P46060 587 aaPredicted RBP27.26■■□□□ 1.95
LINC00240-203ENST00000606878 UHRF1BP1LA0JNW5 1464 aa27.23■■□□□ 1.95
LINC00240-203ENST00000606878 FAM69CQ0P6D2 419 aa27.22■■□□□ 1.95
LINC00240-203ENST00000606878 KIF21BO75037 1637 aa27.21■■□□□ 1.95
LINC00240-203ENST00000606878 ABCC2Q92887 1545 aa27.21■■□□□ 1.95
LINC00240-203ENST00000606878 MAPKBP1O60336 1514 aa27.17■■□□□ 1.94
LINC00240-203ENST00000606878 ABCC10Q5T3U5 1492 aa27.13■■□□□ 1.93
LINC00240-203ENST00000606878 PLB1Q6P1J6 1458 aa27.12■■□□□ 1.93
LINC00240-203ENST00000606878 KDM5BQ9UGL1 1544 aa27.09■■□□□ 1.93
LINC00240-203ENST00000606878 ASXL2Q76L83 1435 aa27.07■■□□□ 1.92
LINC00240-203ENST00000606878 SAMD9Q5K651 1589 aa27.04■■□□□ 1.92
LINC00240-203ENST00000606878 ABCA8O94911 1581 aa27.02■■□□□ 1.92
LINC00240-203ENST00000606878 ARID3CA6NKF2 412 aa26.99■■□□□ 1.91
LINC00240-203ENST00000606878 FHOD3Q2V2M9 1422 aa26.99■■□□□ 1.91
LINC00240-203ENST00000606878 KIF13AQ9H1H9 1805 aa26.98■■□□□ 1.91
LINC00240-203ENST00000606878 DIP2BQ9P265 1576 aa26.97■■□□□ 1.91
LINC00240-203ENST00000606878 KCNH8Q96L42 1107 aa26.95■■□□□ 1.9
LINC00240-203ENST00000606878 EFCAB5A4FU69 1503 aa26.95■■□□□ 1.9
LINC00240-203ENST00000606878 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.94■■□□□ 1.9
LINC00240-203ENST00000606878 HNRNPUL2Q1KMD3 747 aaKnown RBP26.94■■□□□ 1.9
LINC00240-203ENST00000606878 ZCCHC11Q5TAX3 1644 aaKnown RBP26.94■■□□□ 1.9
LINC00240-203ENST00000606878 ATP10BO94823 1461 aa26.9■■□□□ 1.9
LINC00240-203ENST00000606878 EPRSP07814 1512 aaKnown RBP26.89■■□□□ 1.89
LINC00240-203ENST00000606878 WDR7Q9Y4E6 1490 aa26.88■■□□□ 1.89
LINC00240-203ENST00000606878 GLI2P10070 1586 aa26.86■■□□□ 1.89
LINC00240-203ENST00000606878 RAPGEF6Q8TEU7 1601 aa26.83■■□□□ 1.89
LINC00240-203ENST00000606878 ARHGAP35Q9NRY4 1499 aa26.83■■□□□ 1.89
LINC00240-203ENST00000606878 ATP1B4Q9UN42 357 aaPredicted RBP26.83■■□□□ 1.89
LINC00240-203ENST00000606878 PLEKHD1A6NEE1 506 aa26.81■■□□□ 1.88
LINC00240-203ENST00000606878 FMN1Q68DA7 1419 aa26.81■■□□□ 1.88
LINC00240-203ENST00000606878 NUP153P49790 1475 aaKnown RBP26.8■■□□□ 1.88
LINC00240-203ENST00000606878 TSPOAP1O95153 1857 aa26.76■■□□□ 1.87
LINC00240-203ENST00000606878 CD109Q6YHK3 1445 aa26.73■■□□□ 1.87
LINC00240-203ENST00000606878 CLIP1P30622 1438 aa26.69■■□□□ 1.86
LINC00240-203ENST00000606878 TEX14Q8IWB6 1497 aa26.68■■□□□ 1.86
LINC00240-203ENST00000606878 CDK11AQ9UQ88 783 aaPredicted RBP26.68■■□□□ 1.86
LINC00240-203ENST00000606878 MAP3K4Q9Y6R4 1608 aa26.66■■□□□ 1.86
LINC00240-203ENST00000606878 LOC105371045A0A1W2PR82 267 aa26.66■■□□□ 1.86
LINC00240-203ENST00000606878 MAGI3Q5TCQ9 1506 aa26.62■■□□□ 1.85
LINC00240-203ENST00000606878 KDM6BO15054 1643 aa26.61■■□□□ 1.85
LINC00240-203ENST00000606878 PPRC1Q5VV67 1664 aaKnown RBP26.6■■□□□ 1.85
LINC00240-203ENST00000606878 CFAP43Q8NDM7 1665 aa26.57■■□□□ 1.84
LINC00240-203ENST00000606878 CASKIN1Q8WXD9 1431 aa26.56■■□□□ 1.84
LINC00240-203ENST00000606878 CDK13Q14004 1512 aaKnown RBP26.56■■□□□ 1.84
LINC00240-203ENST00000606878 HECW1Q76N89 1606 aa26.56■■□□□ 1.84
LINC00240-203ENST00000606878 COL17A1Q9UMD9 1497 aaPredicted RBP26.54■■□□□ 1.84
LINC00240-203ENST00000606878 PHLDB1Q86UU1 1377 aa26.52■■□□□ 1.84
LINC00240-203ENST00000606878 ABCA9Q8IUA7 1624 aa26.51■■□□□ 1.83
LINC00240-203ENST00000606878 CEP162Q5TB80 1403 aa26.5■■□□□ 1.83
LINC00240-203ENST00000606878 TROQ12816 1431 aaPredicted RBP26.43■■□□□ 1.82
LINC00240-203ENST00000606878 CCDC18Q5T9S5 1454 aa26.42■■□□□ 1.82
LINC00240-203ENST00000606878 FYCO1Q9BQS8 1478 aa26.42■■□□□ 1.82
LINC00240-203ENST00000606878 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.41■■□□□ 1.82
LINC00240-203ENST00000606878 NEO1Q92859 1461 aa26.41■■□□□ 1.82
LINC00240-203ENST00000606878 PCF11O94913 1555 aaKnown RBP26.4■■□□□ 1.82
LINC00240-203ENST00000606878 ARAP3Q8WWN8 1544 aa26.39■■□□□ 1.82
LINC00240-203ENST00000606878 RAPGEF3O95398 923 aa26.37■■□□□ 1.81
LINC00240-203ENST00000606878 EFCAB2Q5VUJ9 269 aa26.37■■□□□ 1.81
LINC00240-203ENST00000606878 PLCH2O75038 1416 aa26.36■■□□□ 1.81
LINC00240-203ENST00000606878 AKNAQ7Z591 1439 aa26.34■■□□□ 1.81
LINC00240-203ENST00000606878 FANCAO15360 1455 aa26.33■■□□□ 1.81
LINC00240-203ENST00000606878 TTC37Q6PGP7 1564 aa26.31■■□□□ 1.8
LINC00240-203ENST00000606878 LRRIQ1Q96JM4 1722 aa26.3■■□□□ 1.8
LINC00240-203ENST00000606878 KIF14Q15058 1648 aa26.27■■□□□ 1.8
LINC00240-203ENST00000606878 DENND4BO75064 1496 aaPredicted RBP26.26■■□□□ 1.79
LINC00240-203ENST00000606878 MTUS2Q5JR59 1369 aa26.24■■□□□ 1.79
LINC00240-203ENST00000606878 KDM4FA0A1W2PPD8 638 aa26.23■■□□□ 1.79
LINC00240-203ENST00000606878 SCAPERQ9BY12 1400 aa26.22■■□□□ 1.79
LINC00240-203ENST00000606878 CFAP74Q9C0B2 1584 aa26.2■■□□□ 1.79
LINC00240-203ENST00000606878 VPS8Q8N3P4 1428 aa26.2■■□□□ 1.78
LINC00240-203ENST00000606878 ADGRL1O94910 1474 aa26.18■■□□□ 1.78
LINC00240-203ENST00000606878 ARHGAP5Q13017 1502 aa26.17■■□□□ 1.78
LINC00240-203ENST00000606878 MYO5CQ9NQX4 1742 aa26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms