RNA–Protein interactions for RNA: ENST00000604828.1

FOCAD-214, Transcript of focadhesin, humanhuman

Gene FOCAD, Length 1,973 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-214ENST00000604828 ERICH3Q5RHP9 1530 aa15.64■□□□□ 0.09
FOCAD-214ENST00000604828 ADAMTS12P58397 1594 aa15.62■□□□□ 0.09
FOCAD-214ENST00000604828 CLIP1P30622 1438 aa15.62■□□□□ 0.09
FOCAD-214ENST00000604828 CCER1Q8TC90 406 aaPredicted RBP15.61■□□□□ 0.09
FOCAD-214ENST00000604828 IGF1RP08069 1367 aa15.6■□□□□ 0.09
FOCAD-214ENST00000604828 VPS8Q8N3P4 1428 aa15.6■□□□□ 0.09
FOCAD-214ENST00000604828 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.59■□□□□ 0.09
FOCAD-214ENST00000604828 FHAD1B1AJZ9 1412 aa15.59■□□□□ 0.09
FOCAD-214ENST00000604828 RAPGEF2Q9Y4G8 1499 aa15.59■□□□□ 0.09
FOCAD-214ENST00000604828 GRIN2AQ12879 1464 aa15.57■□□□□ 0.08
FOCAD-214ENST00000604828 PRXQ9BXM0 1461 aa15.54■□□□□ 0.08
FOCAD-214ENST00000604828 PHF23Q9BUL5 403 aaPredicted RBP15.52■□□□□ 0.07
FOCAD-214ENST00000604828 CLASP1Q7Z460 1538 aa15.51■□□□□ 0.07
FOCAD-214ENST00000604828 CEP170Q5SW79 1584 aa15.5■□□□□ 0.07
FOCAD-214ENST00000604828 CUL7Q14999 1698 aa15.5■□□□□ 0.07
FOCAD-214ENST00000604828 NUP160Q12769 1436 aa15.5■□□□□ 0.07
FOCAD-214ENST00000604828 CARMIL1Q5VZK9 1371 aa15.49■□□□□ 0.07
FOCAD-214ENST00000604828 ARHGEF11O15085 1522 aa15.46■□□□□ 0.07
FOCAD-214ENST00000604828 TTBK1Q5TCY1 1321 aaPredicted RBP15.45■□□□□ 0.06
FOCAD-214ENST00000604828 RIMBP3CA6NJZ7 1639 aa15.44■□□□□ 0.06
FOCAD-214ENST00000604828 RIMBP3BA6NNM3 1639 aa15.44■□□□□ 0.06
FOCAD-214ENST00000604828 RIMBP3Q9UFD9 1639 aa15.44■□□□□ 0.06
FOCAD-214ENST00000604828 ARAP1Q96P48 1450 aa15.41■□□□□ 0.06
FOCAD-214ENST00000604828 APLP2Q06481 763 aa15.38■□□□□ 0.05
FOCAD-214ENST00000604828 ERCC6L2Q5T890 1561 aa15.36■□□□□ 0.05
FOCAD-214ENST00000604828 KIAA0586Q9BVV6 1533 aa15.36■□□□□ 0.05
FOCAD-214ENST00000604828 SHROOM2Q13796 1616 aa15.35■□□□□ 0.05
FOCAD-214ENST00000604828 JPH4Q96JJ6 628 aa15.35■□□□□ 0.05
FOCAD-214ENST00000604828 CYB5RLQ6IPT4 315 aa15.33■□□□□ 0.05
FOCAD-214ENST00000604828 PRG4Q92954 1404 aaPredicted RBP15.31■□□□□ 0.04
FOCAD-214ENST00000604828 DIEXFQ68CQ4 756 aaKnown RBP15.3■□□□□ 0.04
FOCAD-214ENST00000604828 IQGAP2Q13576 1575 aa15.28■□□□□ 0.04
FOCAD-214ENST00000604828 ARHGAP35Q9NRY4 1499 aa15.27■□□□□ 0.03
FOCAD-214ENST00000604828 HNRNPUL2Q1KMD3 747 aaKnown RBP15.26■□□□□ 0.03
FOCAD-214ENST00000604828 ZNF316A6NFI3 1004 aaPredicted RBP15.25■□□□□ 0.03
FOCAD-214ENST00000604828 RRBP1Q9P2E9 1410 aaKnown RBP15.25■□□□□ 0.03
FOCAD-214ENST00000604828 CLSPNQ9HAW4 1339 aa15.24■□□□□ 0.03
FOCAD-214ENST00000604828 SCAF1Q9H7N4 1312 aaKnown RBP15.24■□□□□ 0.03
FOCAD-214ENST00000604828 MAP3K1Q13233 1512 aa15.24■□□□□ 0.03
FOCAD-214ENST00000604828 CTTNBP2Q8WZ74 1663 aa15.23■□□□□ 0.03
FOCAD-214ENST00000604828 DISP1Q96F81 1524 aa15.2■□□□□ 0.02
FOCAD-214ENST00000604828 RANGAP1P46060 587 aaPredicted RBP15.2■□□□□ 0.02
FOCAD-214ENST00000604828 UGGT2Q9NYU1 1516 aa15.19■□□□□ 0.02
FOCAD-214ENST00000604828 ACIN1Q9UKV3 1341 aaKnown RBP15.18■□□□□ 0.02
FOCAD-214ENST00000604828 CARMIL2Q6F5E8 1435 aa15.17■□□□□ 0.02
FOCAD-214ENST00000604828 KANK4Q5T7N3 995 aaPredicted RBP15.16■□□□□ 0.02
FOCAD-214ENST00000604828 TIAM1Q13009 1591 aa15.16■□□□□ 0.02
FOCAD-214ENST00000604828 CENPBP07199 599 aaPredicted RBP15.15■□□□□ 0.02
FOCAD-214ENST00000604828 DHX57Q6P158 1386 aaKnown RBP15.15■□□□□ 0.02
FOCAD-214ENST00000604828 KIAA0556O60303 1618 aa15.14■□□□□ 0.01
FOCAD-214ENST00000604828 PTPRGP23470 1445 aa15.13■□□□□ 0.01
FOCAD-214ENST00000604828 CCNB3Q8WWL7 1395 aa15.12■□□□□ 0.01
FOCAD-214ENST00000604828 CFAP43Q8NDM7 1665 aa15.11■□□□□ 0.01
FOCAD-214ENST00000604828 NEUROD1Q13562 356 aa15.09■□□□□ 0.01
FOCAD-214ENST00000604828 P3H3Q8IVL6 736 aa15.09■□□□□ 0.01
FOCAD-214ENST00000604828 EFCAB5A4FU69 1503 aa15.08■□□□□ 0
FOCAD-214ENST00000604828 ADCY10Q96PN6 1610 aa15.07■□□□□ 0
FOCAD-214ENST00000604828 SAMD9Q5K651 1589 aa15.07■□□□□ 0
FOCAD-214ENST00000604828 PELP1Q8IZL8 1130 aaKnown RBP15.06■□□□□ 0
FOCAD-214ENST00000604828 LRRC9Q6ZRR7 1453 aa15.06■□□□□ 0
FOCAD-214ENST00000604828 PCF11O94913 1555 aaKnown RBP15.04■□□□□ -0
FOCAD-214ENST00000604828 UACAQ9BZF9 1416 aa15.02■□□□□ -0
FOCAD-214ENST00000604828 PLB1Q6P1J6 1458 aa15.02■□□□□ -0
FOCAD-214ENST00000604828 FHOD3Q2V2M9 1422 aa15.02□□□□□ -0.01
FOCAD-214ENST00000604828 FYCO1Q9BQS8 1478 aa15.02□□□□□ -0.01
FOCAD-214ENST00000604828 ABCC2Q92887 1545 aa14.99□□□□□ -0.01
FOCAD-214ENST00000604828 UHRF1BP1LA0JNW5 1464 aa14.99□□□□□ -0.01
FOCAD-214ENST00000604828 TRHP20396 242 aaPredicted RBP14.98□□□□□ -0.01
FOCAD-214ENST00000604828 CASKIN1Q8WXD9 1431 aa14.97□□□□□ -0.01
FOCAD-214ENST00000604828 NPM1P06748 294 aaKnown RBP eCLIP14.97□□□□□ -0.01
FOCAD-214ENST00000604828 ABCA8O94911 1581 aa14.97□□□□□ -0.01
FOCAD-214ENST00000604828 PHLDB1Q86UU1 1377 aa14.94□□□□□ -0.02
FOCAD-214ENST00000604828 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.94□□□□□ -0.02
FOCAD-214ENST00000604828 MAPKBP1O60336 1514 aa14.94□□□□□ -0.02
FOCAD-214ENST00000604828 KDM5BQ9UGL1 1544 aa14.94□□□□□ -0.02
FOCAD-214ENST00000604828 MIER1Q8N108 512 aa14.94□□□□□ -0.02
FOCAD-214ENST00000604828 RAB3GAP2Q9H2M9 1393 aa14.94□□□□□ -0.02
FOCAD-214ENST00000604828 ARID3CA6NKF2 412 aa14.93□□□□□ -0.02
FOCAD-214ENST00000604828 SETD5Q9C0A6 1442 aa14.93□□□□□ -0.02
FOCAD-214ENST00000604828 GTF3C3Q9Y5Q9 886 aa14.92□□□□□ -0.02
FOCAD-214ENST00000604828 FMN1Q68DA7 1419 aa14.91□□□□□ -0.02
FOCAD-214ENST00000604828 ZCCHC11Q5TAX3 1644 aaKnown RBP14.9□□□□□ -0.02
FOCAD-214ENST00000604828 ASXL2Q76L83 1435 aa14.9□□□□□ -0.02
FOCAD-214ENST00000604828 RAPGEF6Q8TEU7 1601 aa14.89□□□□□ -0.03
FOCAD-214ENST00000604828 NUP153P49790 1475 aaKnown RBP14.88□□□□□ -0.03
FOCAD-214ENST00000604828 ABCC10Q5T3U5 1492 aa14.87□□□□□ -0.03
FOCAD-214ENST00000604828 ATP10BO94823 1461 aa14.87□□□□□ -0.03
FOCAD-214ENST00000604828 DIP2BQ9P265 1576 aa14.85□□□□□ -0.03
FOCAD-214ENST00000604828 KIF13AQ9H1H9 1805 aa14.85□□□□□ -0.03
FOCAD-214ENST00000604828 FAM69CQ0P6D2 419 aa14.85□□□□□ -0.03
FOCAD-214ENST00000604828 ITGAEP38570 1179 aa14.82□□□□□ -0.04
FOCAD-214ENST00000604828 WDR7Q9Y4E6 1490 aa14.82□□□□□ -0.04
FOCAD-214ENST00000604828 ATP1B4Q9UN42 357 aaPredicted RBP14.81□□□□□ -0.04
FOCAD-214ENST00000604828 FGD6Q6ZV73 1430 aa14.8□□□□□ -0.04
FOCAD-214ENST00000604828 EPRSP07814 1512 aaKnown RBP14.8□□□□□ -0.04
FOCAD-214ENST00000604828 TIMELESSQ9UNS1 1208 aa14.8□□□□□ -0.04
FOCAD-214ENST00000604828 CDK13Q14004 1512 aaKnown RBP14.79□□□□□ -0.04
FOCAD-214ENST00000604828 YTHDC1Q96MU7 727 aaKnown RBP14.79□□□□□ -0.04
FOCAD-214ENST00000604828 LRRIQ1Q96JM4 1722 aa14.79□□□□□ -0.04
FOCAD-214ENST00000604828 FOXD1Q16676 465 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms