RNA–Protein interactions for RNA: ENST00000603946.5

NOLC1-208, Transcript of nucleolar and coiled-body phosphoprotein 1, humanhuman

TSL 1 (best)

Gene NOLC1, Length 3,217 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOLC1-208ENST00000603946 GRIN2AQ12879 1464 aa12.91□□□□□ -0.34
NOLC1-208ENST00000603946 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.91□□□□□ -0.34
NOLC1-208ENST00000603946 HNRNPUL2Q1KMD3 747 aaKnown RBP12.91□□□□□ -0.34
NOLC1-208ENST00000603946 SYNJ2O15056 1496 aa12.91□□□□□ -0.34
NOLC1-208ENST00000603946 CEP162Q5TB80 1403 aa12.91□□□□□ -0.34
NOLC1-208ENST00000603946 CYB5RLQ6IPT4 315 aa12.89□□□□□ -0.35
NOLC1-208ENST00000603946 ADAMTS12P58397 1594 aa12.88□□□□□ -0.35
NOLC1-208ENST00000603946 MAGI1Q96QZ7 1491 aaPredicted RBP12.88□□□□□ -0.35
NOLC1-208ENST00000603946 TNIKQ9UKE5 1360 aa12.88□□□□□ -0.35
NOLC1-208ENST00000603946 CLIP1P30622 1438 aa12.88□□□□□ -0.35
NOLC1-208ENST00000603946 FHOD3Q2V2M9 1422 aa12.87□□□□□ -0.35
NOLC1-208ENST00000603946 CHD1O14646 1710 aa12.86□□□□□ -0.35
NOLC1-208ENST00000603946 CEP170Q5SW79 1584 aa12.84□□□□□ -0.35
NOLC1-208ENST00000603946 KIF21BO75037 1637 aa12.82□□□□□ -0.36
NOLC1-208ENST00000603946 PRG4Q92954 1404 aaPredicted RBP12.82□□□□□ -0.36
NOLC1-208ENST00000603946 ERCC6L2Q5T890 1561 aa12.81□□□□□ -0.36
NOLC1-208ENST00000603946 CUL7Q14999 1698 aa12.81□□□□□ -0.36
NOLC1-208ENST00000603946 ARAP1Q96P48 1450 aa12.78□□□□□ -0.36
NOLC1-208ENST00000603946 ARHGAP35Q9NRY4 1499 aa12.77□□□□□ -0.36
NOLC1-208ENST00000603946 KIAA0586Q9BVV6 1533 aa12.77□□□□□ -0.37
NOLC1-208ENST00000603946 APLP2Q06481 763 aa12.76□□□□□ -0.37
NOLC1-208ENST00000603946 NUP160Q12769 1436 aa12.76□□□□□ -0.37
NOLC1-208ENST00000603946 KANK4Q5T7N3 995 aaPredicted RBP12.75□□□□□ -0.37
NOLC1-208ENST00000603946 KCNH8Q96L42 1107 aa12.75□□□□□ -0.37
NOLC1-208ENST00000603946 IQGAP2Q13576 1575 aa12.73□□□□□ -0.37
NOLC1-208ENST00000603946 PLB1Q6P1J6 1458 aa12.71□□□□□ -0.38
NOLC1-208ENST00000603946 PTPRGP23470 1445 aa12.7□□□□□ -0.38
NOLC1-208ENST00000603946 DISP1Q96F81 1524 aa12.7□□□□□ -0.38
NOLC1-208ENST00000603946 ITGAEP38570 1179 aa12.68□□□□□ -0.38
NOLC1-208ENST00000603946 CARMIL2Q6F5E8 1435 aa12.67□□□□□ -0.38
NOLC1-208ENST00000603946 CTTNBP2Q8WZ74 1663 aa12.67□□□□□ -0.38
NOLC1-208ENST00000603946 PCGF6Q9BYE7 350 aa12.64□□□□□ -0.39
NOLC1-208ENST00000603946 DNAJC5Q9H3Z4 198 aa12.62□□□□□ -0.39
NOLC1-208ENST00000603946 VPS8Q8N3P4 1428 aa12.62□□□□□ -0.39
NOLC1-208ENST00000603946 CLASP1Q7Z460 1538 aa12.61□□□□□ -0.39
NOLC1-208ENST00000603946 ARHGEF11O15085 1522 aa12.6□□□□□ -0.39
NOLC1-208ENST00000603946 ZNF777Q9ULD5 760 aaPredicted RBP12.6□□□□□ -0.39
NOLC1-208ENST00000603946 NPM1P06748 294 aaKnown RBP eCLIP12.6□□□□□ -0.39
NOLC1-208ENST00000603946 CDK13Q14004 1512 aaKnown RBP12.59□□□□□ -0.39
NOLC1-208ENST00000603946 KIAA0556O60303 1618 aa12.59□□□□□ -0.39
NOLC1-208ENST00000603946 UGGT2Q9NYU1 1516 aa12.59□□□□□ -0.39
NOLC1-208ENST00000603946 TRHP20396 242 aaPredicted RBP12.58□□□□□ -0.4
NOLC1-208ENST00000603946 PLEKHD1A6NEE1 506 aa12.56□□□□□ -0.4
NOLC1-208ENST00000603946 FMN1Q68DA7 1419 aa12.55□□□□□ -0.4
NOLC1-208ENST00000603946 PCF11O94913 1555 aaKnown RBP12.55□□□□□ -0.4
NOLC1-208ENST00000603946 FAM50AQ14320 339 aaKnown RBP12.55□□□□□ -0.4
NOLC1-208ENST00000603946 MTUS2Q5JR59 1369 aa12.54□□□□□ -0.4
NOLC1-208ENST00000603946 SAMD9Q5K651 1589 aa12.53□□□□□ -0.4
NOLC1-208ENST00000603946 UACAQ9BZF9 1416 aa12.53□□□□□ -0.4
NOLC1-208ENST00000603946 RIMBP3CA6NJZ7 1639 aa12.53□□□□□ -0.4
NOLC1-208ENST00000603946 RIMBP3BA6NNM3 1639 aa12.53□□□□□ -0.4
NOLC1-208ENST00000603946 RIMBP3Q9UFD9 1639 aa12.53□□□□□ -0.4
NOLC1-208ENST00000603946 NUP153P49790 1475 aaKnown RBP12.51□□□□□ -0.41
NOLC1-208ENST00000603946 ZNF644Q9H582 1327 aaPredicted RBP12.51□□□□□ -0.41
NOLC1-208ENST00000603946 EFCAB5A4FU69 1503 aa12.5□□□□□ -0.41
NOLC1-208ENST00000603946 ATP10BO94823 1461 aa12.5□□□□□ -0.41
NOLC1-208ENST00000603946 CASKIN1Q8WXD9 1431 aa12.49□□□□□ -0.41
NOLC1-208ENST00000603946 FAM69CQ0P6D2 419 aa12.48□□□□□ -0.41
NOLC1-208ENST00000603946 CHIC2Q9UKJ5 165 aa12.48□□□□□ -0.41
NOLC1-208ENST00000603946 SHROOM2Q13796 1616 aa12.48□□□□□ -0.41
NOLC1-208ENST00000603946 EPRSP07814 1512 aaKnown RBP12.48□□□□□ -0.41
NOLC1-208ENST00000603946 CDK11AQ9UQ88 783 aaPredicted RBP12.48□□□□□ -0.41
NOLC1-208ENST00000603946 MYT1LQ9UL68 1186 aa12.45□□□□□ -0.42
NOLC1-208ENST00000603946 MAGI3Q5TCQ9 1506 aa12.44□□□□□ -0.42
NOLC1-208ENST00000603946 RAPGEF6Q8TEU7 1601 aa12.44□□□□□ -0.42
NOLC1-208ENST00000603946 PHLDB1Q86UU1 1377 aa12.43□□□□□ -0.42
NOLC1-208ENST00000603946 LRRIQ1Q96JM4 1722 aa12.43□□□□□ -0.42
NOLC1-208ENST00000603946 CFDP1Q9UEE9 299 aaPredicted RBP12.42□□□□□ -0.42
NOLC1-208ENST00000603946 ADCY10Q96PN6 1610 aa12.41□□□□□ -0.42
NOLC1-208ENST00000603946 HNRNPMP52272 730 aaKnown RBP eCLIP12.41□□□□□ -0.42
NOLC1-208ENST00000603946 FYCO1Q9BQS8 1478 aa12.41□□□□□ -0.42
NOLC1-208ENST00000603946 LRRC9Q6ZRR7 1453 aa12.41□□□□□ -0.42
NOLC1-208ENST00000603946 ASXL2Q76L83 1435 aa12.4□□□□□ -0.42
NOLC1-208ENST00000603946 ABCA8O94911 1581 aa12.4□□□□□ -0.42
NOLC1-208ENST00000603946 TRIM26Q12899 539 aaPredicted RBP12.39□□□□□ -0.43
NOLC1-208ENST00000603946 ABCC2Q92887 1545 aa12.39□□□□□ -0.43
NOLC1-208ENST00000603946 TIAM1Q13009 1591 aa12.38□□□□□ -0.43
NOLC1-208ENST00000603946 RRP7BPQ9NSQ0 103 aa12.36□□□□□ -0.43
NOLC1-208ENST00000603946 CCNB3Q8WWL7 1395 aa12.36□□□□□ -0.43
NOLC1-208ENST00000603946 HECW1Q76N89 1606 aa12.36□□□□□ -0.43
NOLC1-208ENST00000603946 RAPGEF3O95398 923 aa12.35□□□□□ -0.43
NOLC1-208ENST00000603946 AFAP1Q8N556 730 aa12.35□□□□□ -0.43
NOLC1-208ENST00000603946 NCOA2Q15596 1464 aa12.35□□□□□ -0.43
NOLC1-208ENST00000603946 KIF14Q15058 1648 aa12.34□□□□□ -0.43
NOLC1-208ENST00000603946 ZCCHC11Q5TAX3 1644 aaKnown RBP12.33□□□□□ -0.44
NOLC1-208ENST00000603946 TROQ12816 1431 aaPredicted RBP12.33□□□□□ -0.44
NOLC1-208ENST00000603946 KDM5BQ9UGL1 1544 aa12.32□□□□□ -0.44
NOLC1-208ENST00000603946 CCDC18Q5T9S5 1454 aa12.3□□□□□ -0.44
NOLC1-208ENST00000603946 PLPPR3Q6T4P5 718 aa12.29□□□□□ -0.44
NOLC1-208ENST00000603946 WDR7Q9Y4E6 1490 aa12.28□□□□□ -0.44
NOLC1-208ENST00000603946 TSPOAP1O95153 1857 aa12.28□□□□□ -0.44
NOLC1-208ENST00000603946 CD109Q6YHK3 1445 aa12.27□□□□□ -0.45
NOLC1-208ENST00000603946 UHRF1BP1LA0JNW5 1464 aa12.26□□□□□ -0.45
NOLC1-208ENST00000603946 EFCAB2Q5VUJ9 269 aa12.26□□□□□ -0.45
NOLC1-208ENST00000603946 GPATCH8Q9UKJ3 1502 aaKnown RBP12.25□□□□□ -0.45
NOLC1-208ENST00000603946 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.24□□□□□ -0.45
NOLC1-208ENST00000603946 TTC37Q6PGP7 1564 aa12.24□□□□□ -0.45
NOLC1-208ENST00000603946 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.24□□□□□ -0.457e-8■■■□□ 18.5
NOLC1-208ENST00000603946 MYOM3Q5VTT5 1437 aa12.24□□□□□ -0.45
NOLC1-208ENST00000603946 ARHGAP5Q13017 1502 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms