RNA–Protein interactions for RNA: ENST00000603731.1

HERPUD2-207, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-207ENST00000603731 RAPGEF2Q9Y4G8 1499 aa20.36■□□□□ 0.85
HERPUD2-207ENST00000603731 CARMIL1Q5VZK9 1371 aa20.35■□□□□ 0.85
HERPUD2-207ENST00000603731 TNIKQ9UKE5 1360 aa20.34■□□□□ 0.85
HERPUD2-207ENST00000603731 GRIN2BQ13224 1484 aa20.3■□□□□ 0.84
HERPUD2-207ENST00000603731 SNAPC4Q5SXM2 1469 aa20.28■□□□□ 0.84
HERPUD2-207ENST00000603731 ADAMTS12P58397 1594 aa20.21■□□□□ 0.83
HERPUD2-207ENST00000603731 FHAD1B1AJZ9 1412 aa20.2■□□□□ 0.82
HERPUD2-207ENST00000603731 CHMP7Q8WUX9 453 aaPredicted RBP20.2■□□□□ 0.82
HERPUD2-207ENST00000603731 CEP162Q5TB80 1403 aa20.19■□□□□ 0.82
HERPUD2-207ENST00000603731 MAGI1Q96QZ7 1491 aaPredicted RBP20.16■□□□□ 0.82
HERPUD2-207ENST00000603731 CTTNBP2Q8WZ74 1663 aa20.16■□□□□ 0.82
HERPUD2-207ENST00000603731 KIF13AQ9H1H9 1805 aa20.11■□□□□ 0.81
HERPUD2-207ENST00000603731 SYNJ2O15056 1496 aa20.11■□□□□ 0.81
HERPUD2-207ENST00000603731 CLIP1P30622 1438 aa20.1■□□□□ 0.81
HERPUD2-207ENST00000603731 RANGAP1P46060 587 aaPredicted RBP20.1■□□□□ 0.81
HERPUD2-207ENST00000603731 ERCC6L2Q5T890 1561 aa20.08■□□□□ 0.81
HERPUD2-207ENST00000603731 KDM4FA0A1W2PPD8 638 aa20.05■□□□□ 0.8
HERPUD2-207ENST00000603731 GRIN2AQ12879 1464 aa20.04■□□□□ 0.8
HERPUD2-207ENST00000603731 IQGAP2Q13576 1575 aa19.95■□□□□ 0.78
HERPUD2-207ENST00000603731 ARHGAP35Q9NRY4 1499 aa19.93■□□□□ 0.78
HERPUD2-207ENST00000603731 EFCAB5A4FU69 1503 aa19.93■□□□□ 0.78
HERPUD2-207ENST00000603731 KIAA0586Q9BVV6 1533 aa19.92■□□□□ 0.78
HERPUD2-207ENST00000603731 CEP170Q5SW79 1584 aa19.91■□□□□ 0.78
HERPUD2-207ENST00000603731 VPS8Q8N3P4 1428 aa19.9■□□□□ 0.78
HERPUD2-207ENST00000603731 NUP160Q12769 1436 aa19.88■□□□□ 0.77
HERPUD2-207ENST00000603731 KDM6BO15054 1643 aa19.85■□□□□ 0.77
HERPUD2-207ENST00000603731 P3H3Q8IVL6 736 aa19.85■□□□□ 0.77
HERPUD2-207ENST00000603731 SAMD9Q5K651 1589 aa19.85■□□□□ 0.77
HERPUD2-207ENST00000603731 UGGT2Q9NYU1 1516 aa19.83■□□□□ 0.77
HERPUD2-207ENST00000603731 FAM69CQ0P6D2 419 aa19.83■□□□□ 0.77
HERPUD2-207ENST00000603731 ABCC10Q5T3U5 1492 aa19.83■□□□□ 0.76
HERPUD2-207ENST00000603731 SHROOM2Q13796 1616 aa19.83■□□□□ 0.76
HERPUD2-207ENST00000603731 FHOD3Q2V2M9 1422 aa19.8■□□□□ 0.76
HERPUD2-207ENST00000603731 APLP2Q06481 763 aa19.79■□□□□ 0.76
HERPUD2-207ENST00000603731 DIP2BQ9P265 1576 aa19.78■□□□□ 0.76
HERPUD2-207ENST00000603731 JPH4Q96JJ6 628 aa19.75■□□□□ 0.75
HERPUD2-207ENST00000603731 FMN1Q68DA7 1419 aa19.75■□□□□ 0.75
HERPUD2-207ENST00000603731 KIAA0556O60303 1618 aa19.74■□□□□ 0.75
HERPUD2-207ENST00000603731 HECW2Q9P2P5 1572 aa19.74■□□□□ 0.75
HERPUD2-207ENST00000603731 CARMIL2Q6F5E8 1435 aa19.72■□□□□ 0.75
HERPUD2-207ENST00000603731 MAPKBP1O60336 1514 aa19.71■□□□□ 0.75
HERPUD2-207ENST00000603731 TSPOAP1O95153 1857 aa19.71■□□□□ 0.75
HERPUD2-207ENST00000603731 DISP1Q96F81 1524 aa19.71■□□□□ 0.75
HERPUD2-207ENST00000603731 ADGRL1O94910 1474 aa19.69■□□□□ 0.74
HERPUD2-207ENST00000603731 PPARGC1BQ86YN6 1023 aaKnown RBP19.69■□□□□ 0.74
HERPUD2-207ENST00000603731 PCF11O94913 1555 aaKnown RBP19.69■□□□□ 0.74
HERPUD2-207ENST00000603731 ATP1B4Q9UN42 357 aaPredicted RBP19.67■□□□□ 0.74
HERPUD2-207ENST00000603731 PRG4Q92954 1404 aaPredicted RBP19.67■□□□□ 0.74
HERPUD2-207ENST00000603731 CASKIN1Q8WXD9 1431 aa19.66■□□□□ 0.74
HERPUD2-207ENST00000603731 FYCO1Q9BQS8 1478 aa19.66■□□□□ 0.74
HERPUD2-207ENST00000603731 NPM1P06748 294 aaKnown RBP eCLIP19.62■□□□□ 0.73
HERPUD2-207ENST00000603731 ADCY10Q96PN6 1610 aa19.62■□□□□ 0.73
HERPUD2-207ENST00000603731 TTBK1Q5TCY1 1321 aaPredicted RBP19.61■□□□□ 0.73
HERPUD2-207ENST00000603731 MAP3K1Q13233 1512 aa19.6■□□□□ 0.73
HERPUD2-207ENST00000603731 CFAP43Q8NDM7 1665 aa19.59■□□□□ 0.73
HERPUD2-207ENST00000603731 HECW1Q76N89 1606 aa19.58■□□□□ 0.73
HERPUD2-207ENST00000603731 TIAM1Q13009 1591 aa19.58■□□□□ 0.73
HERPUD2-207ENST00000603731 TRIM26Q12899 539 aaPredicted RBP19.58■□□□□ 0.72
HERPUD2-207ENST00000603731 FBXO41Q8TF61 875 aa19.57■□□□□ 0.72
HERPUD2-207ENST00000603731 RAPGEF6Q8TEU7 1601 aa19.55■□□□□ 0.72
HERPUD2-207ENST00000603731 LRRIQ1Q96JM4 1722 aa19.54■□□□□ 0.72
HERPUD2-207ENST00000603731 CCDC18Q5T9S5 1454 aa19.52■□□□□ 0.72
HERPUD2-207ENST00000603731 PTPRGP23470 1445 aa19.51■□□□□ 0.71
HERPUD2-207ENST00000603731 KANK4Q5T7N3 995 aaPredicted RBP19.5■□□□□ 0.71
HERPUD2-207ENST00000603731 PCGF6Q9BYE7 350 aa19.49■□□□□ 0.71
HERPUD2-207ENST00000603731 LRRC9Q6ZRR7 1453 aa19.48■□□□□ 0.71
HERPUD2-207ENST00000603731 PPRC1Q5VV67 1664 aaKnown RBP19.47■□□□□ 0.71
HERPUD2-207ENST00000603731 EPRSP07814 1512 aaKnown RBP19.46■□□□□ 0.71
HERPUD2-207ENST00000603731 ABCA8O94911 1581 aa19.46■□□□□ 0.71
HERPUD2-207ENST00000603731 PLB1Q6P1J6 1458 aa19.46■□□□□ 0.71
HERPUD2-207ENST00000603731 NUP153P49790 1475 aaKnown RBP19.43■□□□□ 0.7
HERPUD2-207ENST00000603731 MTUS2Q5JR59 1369 aa19.43■□□□□ 0.7
HERPUD2-207ENST00000603731 CDK13Q14004 1512 aaKnown RBP19.41■□□□□ 0.7
HERPUD2-207ENST00000603731 ARID3CA6NKF2 412 aa19.41■□□□□ 0.7
HERPUD2-207ENST00000603731 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.41■□□□□ 0.7
HERPUD2-207ENST00000603731 HNRNPUL2Q1KMD3 747 aaKnown RBP19.41■□□□□ 0.7
HERPUD2-207ENST00000603731 COL17A1Q9UMD9 1497 aaPredicted RBP19.4■□□□□ 0.7
HERPUD2-207ENST00000603731 EHBP1L1Q8N3D4 1523 aa19.4■□□□□ 0.7
HERPUD2-207ENST00000603731 UACAQ9BZF9 1416 aa19.39■□□□□ 0.69
HERPUD2-207ENST00000603731 SUPT6HQ7KZ85 1726 aaKnown RBP19.37■□□□□ 0.69
HERPUD2-207ENST00000603731 LMTK3Q96Q04 1460 aa19.37■□□□□ 0.69
HERPUD2-207ENST00000603731 CDK11AQ9UQ88 783 aaPredicted RBP19.37■□□□□ 0.69
HERPUD2-207ENST00000603731 GLI2P10070 1586 aa19.35■□□□□ 0.69
HERPUD2-207ENST00000603731 ABCC2Q92887 1545 aa19.34■□□□□ 0.69
HERPUD2-207ENST00000603731 MAGI3Q5TCQ9 1506 aa19.32■□□□□ 0.68
HERPUD2-207ENST00000603731 ATP10BO94823 1461 aa19.31■□□□□ 0.68
HERPUD2-207ENST00000603731 UHRF1BP1LA0JNW5 1464 aa19.29■□□□□ 0.68
HERPUD2-207ENST00000603731 ASXL2Q76L83 1435 aa19.29■□□□□ 0.68
HERPUD2-207ENST00000603731 NCOA2Q15596 1464 aa19.28■□□□□ 0.68
HERPUD2-207ENST00000603731 PLEKHD1A6NEE1 506 aa19.27■□□□□ 0.68
HERPUD2-207ENST00000603731 TROQ12816 1431 aaPredicted RBP19.26■□□□□ 0.67
HERPUD2-207ENST00000603731 RRBP1Q9P2E9 1410 aaKnown RBP19.25■□□□□ 0.67
HERPUD2-207ENST00000603731 PHLDB1Q86UU1 1377 aa19.25■□□□□ 0.67
HERPUD2-207ENST00000603731 ZCCHC11Q5TAX3 1644 aaKnown RBP19.23■□□□□ 0.67
HERPUD2-207ENST00000603731 MAP3K4Q9Y6R4 1608 aa19.23■□□□□ 0.67
HERPUD2-207ENST00000603731 CCNB3Q8WWL7 1395 aa19.22■□□□□ 0.67
HERPUD2-207ENST00000603731 KIF14Q15058 1648 aa19.2■□□□□ 0.66
HERPUD2-207ENST00000603731 KDM5BQ9UGL1 1544 aa19.2■□□□□ 0.66
HERPUD2-207ENST00000603731 MYOM3Q5VTT5 1437 aa19.19■□□□□ 0.66
HERPUD2-207ENST00000603731 TEX14Q8IWB6 1497 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms