RNA–Protein interactions for RNA: ENST00000603232.6

CELF4-223, Transcript of CUGBP Elav-like family member 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CELF4, Length 1,906 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF4-223ENST00000603232 RAPGEF2Q9Y4G8 1499 aa23.87■■□□□ 1.41
CELF4-223ENST00000603232 KIF21BO75037 1637 aa23.85■■□□□ 1.41
CELF4-223ENST00000603232 CEP170Q5SW79 1584 aa23.82■■□□□ 1.4
CELF4-223ENST00000603232 NUP160Q12769 1436 aa23.75■■□□□ 1.39
CELF4-223ENST00000603232 GOLGA3Q08378 1498 aa23.73■■□□□ 1.39
CELF4-223ENST00000603232 CTTNBP2Q8WZ74 1663 aa23.72■■□□□ 1.39
CELF4-223ENST00000603232 TNIKQ9UKE5 1360 aa23.71■■□□□ 1.39
CELF4-223ENST00000603232 OSCARQ8IYS5 282 aa23.71■■□□□ 1.39
CELF4-223ENST00000603232 CLASP1Q7Z460 1538 aa23.7■■□□□ 1.38
CELF4-223ENST00000603232 CEP162Q5TB80 1403 aa23.65■■□□□ 1.38
CELF4-223ENST00000603232 UBTFP17480 764 aaKnown RBP23.64■■□□□ 1.37
CELF4-223ENST00000603232 KIAA0586Q9BVV6 1533 aa23.62■■□□□ 1.37
CELF4-223ENST00000603232 IQGAP2Q13576 1575 aa23.61■■□□□ 1.37
CELF4-223ENST00000603232 RANGAP1P46060 587 aaPredicted RBP23.55■■□□□ 1.36
CELF4-223ENST00000603232 SHROOM2Q13796 1616 aa23.55■■□□□ 1.36
CELF4-223ENST00000603232 PELP1Q8IZL8 1130 aaKnown RBP23.52■■□□□ 1.36
CELF4-223ENST00000603232 ERCC6L2Q5T890 1561 aa23.52■■□□□ 1.36
CELF4-223ENST00000603232 SCAF1Q9H7N4 1312 aaKnown RBP23.51■■□□□ 1.35
CELF4-223ENST00000603232 JPH4Q96JJ6 628 aa23.5■■□□□ 1.35
CELF4-223ENST00000603232 UGGT2Q9NYU1 1516 aa23.46■■□□□ 1.35
CELF4-223ENST00000603232 PRG4Q92954 1404 aaPredicted RBP23.46■■□□□ 1.35
CELF4-223ENST00000603232 DISP1Q96F81 1524 aa23.42■■□□□ 1.34
CELF4-223ENST00000603232 ARHGEF11O15085 1522 aa23.41■■□□□ 1.34
CELF4-223ENST00000603232 RIMBP3CA6NJZ7 1639 aa23.4■■□□□ 1.34
CELF4-223ENST00000603232 RIMBP3BA6NNM3 1639 aa23.4■■□□□ 1.34
CELF4-223ENST00000603232 KIAA0556O60303 1618 aa23.4■■□□□ 1.34
CELF4-223ENST00000603232 RIMBP3Q9UFD9 1639 aa23.4■■□□□ 1.34
CELF4-223ENST00000603232 CCER1Q8TC90 406 aaPredicted RBP23.4■■□□□ 1.34
CELF4-223ENST00000603232 SAMD9Q5K651 1589 aa23.39■■□□□ 1.34
CELF4-223ENST00000603232 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.38■■□□□ 1.33
CELF4-223ENST00000603232 P3H3Q8IVL6 736 aa23.38■■□□□ 1.33
CELF4-223ENST00000603232 ARHGAP35Q9NRY4 1499 aa23.34■■□□□ 1.33
CELF4-223ENST00000603232 TTBK1Q5TCY1 1321 aaPredicted RBP23.33■■□□□ 1.33
CELF4-223ENST00000603232 CLIP1P30622 1438 aa23.33■■□□□ 1.32
CELF4-223ENST00000603232 CARMIL2Q6F5E8 1435 aa23.32■■□□□ 1.32
CELF4-223ENST00000603232 FHOD3Q2V2M9 1422 aa23.31■■□□□ 1.32
CELF4-223ENST00000603232 EFCAB5A4FU69 1503 aa23.31■■□□□ 1.32
CELF4-223ENST00000603232 ARAP1Q96P48 1450 aa23.28■■□□□ 1.32
CELF4-223ENST00000603232 PTPRGP23470 1445 aa23.2■■□□□ 1.3
CELF4-223ENST00000603232 VPS8Q8N3P4 1428 aa23.18■■□□□ 1.3
CELF4-223ENST00000603232 CYB5RLQ6IPT4 315 aa23.16■■□□□ 1.3
CELF4-223ENST00000603232 ACIN1Q9UKV3 1341 aaKnown RBP23.15■■□□□ 1.3
CELF4-223ENST00000603232 PLB1Q6P1J6 1458 aa23.14■■□□□ 1.3
CELF4-223ENST00000603232 ABCA8O94911 1581 aa23.1■■□□□ 1.29
CELF4-223ENST00000603232 ADCY10Q96PN6 1610 aa23.09■■□□□ 1.29
CELF4-223ENST00000603232 PCF11O94913 1555 aaKnown RBP23.09■■□□□ 1.29
CELF4-223ENST00000603232 RAPGEF6Q8TEU7 1601 aa23.08■■□□□ 1.29
CELF4-223ENST00000603232 FMN1Q68DA7 1419 aa23.06■■□□□ 1.28
CELF4-223ENST00000603232 UACAQ9BZF9 1416 aa23.06■■□□□ 1.28
CELF4-223ENST00000603232 DIEXFQ68CQ4 756 aaKnown RBP23.06■■□□□ 1.28
CELF4-223ENST00000603232 NEUROD1Q13562 356 aa23.06■■□□□ 1.28
CELF4-223ENST00000603232 ABCC2Q92887 1545 aa23.04■■□□□ 1.28
CELF4-223ENST00000603232 ARID3CA6NKF2 412 aa23.04■■□□□ 1.28
CELF4-223ENST00000603232 LRRIQ1Q96JM4 1722 aa23.03■■□□□ 1.28
CELF4-223ENST00000603232 ATP1B4Q9UN42 357 aaPredicted RBP23■■□□□ 1.27
CELF4-223ENST00000603232 NUP153P49790 1475 aaKnown RBP23■■□□□ 1.27
CELF4-223ENST00000603232 UHRF1BP1LA0JNW5 1464 aa22.98■■□□□ 1.27
CELF4-223ENST00000603232 HECW1Q76N89 1606 aa22.98■■□□□ 1.27
CELF4-223ENST00000603232 CASKIN1Q8WXD9 1431 aa22.98■■□□□ 1.27
CELF4-223ENST00000603232 FYCO1Q9BQS8 1478 aa22.95■■□□□ 1.26
CELF4-223ENST00000603232 ZCCHC11Q5TAX3 1644 aaKnown RBP22.95■■□□□ 1.26
CELF4-223ENST00000603232 CDK13Q14004 1512 aaKnown RBP22.95■■□□□ 1.26
CELF4-223ENST00000603232 ZNF316A6NFI3 1004 aaPredicted RBP22.94■■□□□ 1.26
CELF4-223ENST00000603232 KDM5BQ9UGL1 1544 aa22.9■■□□□ 1.26
CELF4-223ENST00000603232 ATP10BO94823 1461 aa22.9■■□□□ 1.26
CELF4-223ENST00000603232 EPRSP07814 1512 aaKnown RBP22.9■■□□□ 1.26
CELF4-223ENST00000603232 APLP2Q06481 763 aa22.9■■□□□ 1.26
CELF4-223ENST00000603232 CENPBP07199 599 aaPredicted RBP22.89■■□□□ 1.25
CELF4-223ENST00000603232 HNRNPUL2Q1KMD3 747 aaKnown RBP22.85■■□□□ 1.25
CELF4-223ENST00000603232 CLSPNQ9HAW4 1339 aa22.83■■□□□ 1.25
CELF4-223ENST00000603232 CFAP43Q8NDM7 1665 aa22.82■■□□□ 1.24
CELF4-223ENST00000603232 GTF3C3Q9Y5Q9 886 aa22.82■■□□□ 1.24
CELF4-223ENST00000603232 NPM1P06748 294 aaKnown RBP eCLIP22.81■■□□□ 1.24
CELF4-223ENST00000603232 CCDC18Q5T9S5 1454 aa22.8■■□□□ 1.24
CELF4-223ENST00000603232 TIAM1Q13009 1591 aa22.79■■□□□ 1.24
CELF4-223ENST00000603232 MAGI3Q5TCQ9 1506 aa22.79■■□□□ 1.24
CELF4-223ENST00000603232 ASXL2Q76L83 1435 aa22.77■■□□□ 1.24
CELF4-223ENST00000603232 MAPKBP1O60336 1514 aa22.76■■□□□ 1.23
CELF4-223ENST00000603232 WDR7Q9Y4E6 1490 aa22.72■■□□□ 1.23
CELF4-223ENST00000603232 RRBP1Q9P2E9 1410 aaKnown RBP22.72■■□□□ 1.23
CELF4-223ENST00000603232 KANK4Q5T7N3 995 aaPredicted RBP22.7■■□□□ 1.22
CELF4-223ENST00000603232 KIF14Q15058 1648 aa22.69■■□□□ 1.22
CELF4-223ENST00000603232 MAP3K1Q13233 1512 aa22.68■■□□□ 1.22
CELF4-223ENST00000603232 PLEKHD1A6NEE1 506 aa22.68■■□□□ 1.22
CELF4-223ENST00000603232 KCNH8Q96L42 1107 aa22.68■■□□□ 1.22
CELF4-223ENST00000603232 TROQ12816 1431 aaPredicted RBP22.66■■□□□ 1.22
CELF4-223ENST00000603232 LRRC9Q6ZRR7 1453 aa22.66■■□□□ 1.22
CELF4-223ENST00000603232 KIF13AQ9H1H9 1805 aa22.65■■□□□ 1.22
CELF4-223ENST00000603232 MTUS2Q5JR59 1369 aa22.65■■□□□ 1.22
CELF4-223ENST00000603232 EHBP1L1Q8N3D4 1523 aa22.64■■□□□ 1.22
CELF4-223ENST00000603232 DIP2BQ9P265 1576 aa22.64■■□□□ 1.22
CELF4-223ENST00000603232 CDK11AQ9UQ88 783 aaPredicted RBP22.64■■□□□ 1.21
CELF4-223ENST00000603232 DHX57Q6P158 1386 aaKnown RBP22.62■■□□□ 1.21
CELF4-223ENST00000603232 TTC37Q6PGP7 1564 aa22.61■■□□□ 1.21
CELF4-223ENST00000603232 ABCC10Q5T3U5 1492 aa22.6■■□□□ 1.21
CELF4-223ENST00000603232 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.59■■□□□ 1.21
CELF4-223ENST00000603232 SUPT6HQ7KZ85 1726 aaKnown RBP22.57■■□□□ 1.2
CELF4-223ENST00000603232 FAM69CQ0P6D2 419 aa22.56■■□□□ 1.2
CELF4-223ENST00000603232 ABCA9Q8IUA7 1624 aa22.55■■□□□ 1.2
CELF4-223ENST00000603232 TSPOAP1O95153 1857 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms