RNA–Protein interactions for RNA: ENST00000602848.5

PPFIA3-211, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-211ENST00000602848 ARHGAP35Q9NRY4 1499 aa34.79■■■■□ 3.16
PPFIA3-211ENST00000602848 RANGAP1P46060 587 aaPredicted RBP34.79■■■■□ 3.16
PPFIA3-211ENST00000602848 CHD1O14646 1710 aa34.72■■■■□ 3.15
PPFIA3-211ENST00000602848 EFCAB5A4FU69 1503 aa34.71■■■■□ 3.15
PPFIA3-211ENST00000602848 SYNJ2O15056 1496 aa34.68■■■■□ 3.14
PPFIA3-211ENST00000602848 PCGF6Q9BYE7 350 aa34.67■■■■□ 3.14
PPFIA3-211ENST00000602848 APLP2Q06481 763 aa34.59■■■■□ 3.13
PPFIA3-211ENST00000602848 FBLN2P98095 1184 aa34.57■■■■□ 3.12
PPFIA3-211ENST00000602848 GRIN2AQ12879 1464 aa34.57■■■■□ 3.12
PPFIA3-211ENST00000602848 CHMP7Q8WUX9 453 aaPredicted RBP34.56■■■■□ 3.12
PPFIA3-211ENST00000602848 OSCARQ8IYS5 282 aa34.52■■■■□ 3.12
PPFIA3-211ENST00000602848 SAMD9Q5K651 1589 aa34.51■■■■□ 3.11
PPFIA3-211ENST00000602848 IQGAP2Q13576 1575 aa34.5■■■■□ 3.11
PPFIA3-211ENST00000602848 KIAA0586Q9BVV6 1533 aa34.49■■■■□ 3.11
PPFIA3-211ENST00000602848 PPARGC1BQ86YN6 1023 aaKnown RBP34.48■■■■□ 3.11
PPFIA3-211ENST00000602848 MAP3K1Q13233 1512 aa34.4■■■■□ 3.1
PPFIA3-211ENST00000602848 FMN1Q68DA7 1419 aa34.4■■■■□ 3.1
PPFIA3-211ENST00000602848 UGGT2Q9NYU1 1516 aa34.39■■■■□ 3.1
PPFIA3-211ENST00000602848 CEP170Q5SW79 1584 aa34.38■■■■□ 3.09
PPFIA3-211ENST00000602848 NUP160Q12769 1436 aa34.38■■■■□ 3.09
PPFIA3-211ENST00000602848 FHOD3Q2V2M9 1422 aa34.38■■■■□ 3.09
PPFIA3-211ENST00000602848 DNAJC5Q9H3Z4 198 aa34.37■■■■□ 3.09
PPFIA3-211ENST00000602848 CLASP1Q7Z460 1538 aa34.36■■■■□ 3.09
PPFIA3-211ENST00000602848 P3H3Q8IVL6 736 aa34.35■■■■□ 3.09
PPFIA3-211ENST00000602848 CASKIN1Q8WXD9 1431 aa34.31■■■■□ 3.08
PPFIA3-211ENST00000602848 FYCO1Q9BQS8 1478 aa34.3■■■■□ 3.08
PPFIA3-211ENST00000602848 PCF11O94913 1555 aaKnown RBP34.24■■■■□ 3.07
PPFIA3-211ENST00000602848 TIAM1Q13009 1591 aa34.21■■■■□ 3.07
PPFIA3-211ENST00000602848 TTBK1Q5TCY1 1321 aaPredicted RBP34.16■■■■□ 3.06
PPFIA3-211ENST00000602848 DISP1Q96F81 1524 aa34.14■■■■□ 3.06
PPFIA3-211ENST00000602848 KIAA0556O60303 1618 aa34.14■■■■□ 3.06
PPFIA3-211ENST00000602848 CFAP43Q8NDM7 1665 aa34.13■■■■□ 3.05
PPFIA3-211ENST00000602848 KANK4Q5T7N3 995 aaPredicted RBP34.13■■■■□ 3.05
PPFIA3-211ENST00000602848 SHROOM2Q13796 1616 aa34.09■■■■□ 3.05
PPFIA3-211ENST00000602848 JPH4Q96JJ6 628 aa34.08■■■■□ 3.05
PPFIA3-211ENST00000602848 CARMIL2Q6F5E8 1435 aa34.07■■■■□ 3.04
PPFIA3-211ENST00000602848 LRRC9Q6ZRR7 1453 aa34.06■■■■□ 3.04
PPFIA3-211ENST00000602848 ARHGEF11O15085 1522 aa34.03■■■■□ 3.04
PPFIA3-211ENST00000602848 ATP1B4Q9UN42 357 aaPredicted RBP34.02■■■■□ 3.04
PPFIA3-211ENST00000602848 RIMBP3CA6NJZ7 1639 aa34.01■■■■□ 3.04
PPFIA3-211ENST00000602848 RIMBP3BA6NNM3 1639 aa34.01■■■■□ 3.04
PPFIA3-211ENST00000602848 RIMBP3Q9UFD9 1639 aa34.01■■■■□ 3.04
PPFIA3-211ENST00000602848 HECW1Q76N89 1606 aa33.98■■■■□ 3.03
PPFIA3-211ENST00000602848 CCDC18Q5T9S5 1454 aa33.98■■■■□ 3.03
PPFIA3-211ENST00000602848 ERCC6L2Q5T890 1561 aa33.96■■■■□ 3.03
PPFIA3-211ENST00000602848 PRG4Q92954 1404 aaPredicted RBP33.89■■■■□ 3.02
PPFIA3-211ENST00000602848 RRBP1Q9P2E9 1410 aaKnown RBP33.88■■■■□ 3.01
PPFIA3-211ENST00000602848 LRRIQ1Q96JM4 1722 aa33.87■■■■□ 3.01
PPFIA3-211ENST00000602848 EPRSP07814 1512 aaKnown RBP33.83■■■■□ 3.01
PPFIA3-211ENST00000602848 RAPGEF6Q8TEU7 1601 aa33.83■■■■□ 3.01
PPFIA3-211ENST00000602848 MTUS2Q5JR59 1369 aa33.8■■■■□ 3
PPFIA3-211ENST00000602848 HRCP23327 699 aa33.79■■■■□ 3
PPFIA3-211ENST00000602848 EHBP1L1Q8N3D4 1523 aa33.78■■■■□ 3
PPFIA3-211ENST00000602848 CCNB3Q8WWL7 1395 aa33.74■■■□□ 2.99
PPFIA3-211ENST00000602848 NUP153P49790 1475 aaKnown RBP33.72■■■□□ 2.99
PPFIA3-211ENST00000602848 PHLDB1Q86UU1 1377 aa33.69■■■□□ 2.98
PPFIA3-211ENST00000602848 SUPT6HQ7KZ85 1726 aaKnown RBP33.68■■■□□ 2.98
PPFIA3-211ENST00000602848 ABCA8O94911 1581 aa33.67■■■□□ 2.98
PPFIA3-211ENST00000602848 PTPRGP23470 1445 aa33.67■■■□□ 2.98
PPFIA3-211ENST00000602848 PLB1Q6P1J6 1458 aa33.65■■■□□ 2.98
PPFIA3-211ENST00000602848 CDK11AQ9UQ88 783 aaPredicted RBP33.65■■■□□ 2.98
PPFIA3-211ENST00000602848 CDK13Q14004 1512 aaKnown RBP33.64■■■□□ 2.98
PPFIA3-211ENST00000602848 CYB5RLQ6IPT4 315 aa33.63■■■□□ 2.97
PPFIA3-211ENST00000602848 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.63■■■□□ 2.97
PPFIA3-211ENST00000602848 NCOA2Q15596 1464 aa33.61■■■□□ 2.97
PPFIA3-211ENST00000602848 MAGI3Q5TCQ9 1506 aa33.61■■■□□ 2.97
PPFIA3-211ENST00000602848 HNRNPUL2Q1KMD3 747 aaKnown RBP33.59■■■□□ 2.97
PPFIA3-211ENST00000602848 ZEB1P37275 1124 aaPredicted RBP33.57■■■□□ 2.97
PPFIA3-211ENST00000602848 MYOM3Q5VTT5 1437 aa33.52■■■□□ 2.96
PPFIA3-211ENST00000602848 FGD6Q6ZV73 1430 aa33.51■■■□□ 2.96
PPFIA3-211ENST00000602848 UACAQ9BZF9 1416 aa33.49■■■□□ 2.95
PPFIA3-211ENST00000602848 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.46■■■□□ 2.95
PPFIA3-211ENST00000602848 TROQ12816 1431 aaPredicted RBP33.46■■■□□ 2.95
PPFIA3-211ENST00000602848 ARID3CA6NKF2 412 aa33.44■■■□□ 2.94
PPFIA3-211ENST00000602848 ATP10BO94823 1461 aa33.44■■■□□ 2.94
PPFIA3-211ENST00000602848 MIA2Q96PC5 1412 aa33.4■■■□□ 2.94
PPFIA3-211ENST00000602848 FAM50AQ14320 339 aaKnown RBP33.4■■■□□ 2.94
PPFIA3-211ENST00000602848 ADCY10Q96PN6 1610 aa33.38■■■□□ 2.93
PPFIA3-211ENST00000602848 PLEKHD1A6NEE1 506 aa33.37■■■□□ 2.93
PPFIA3-211ENST00000602848 CCER1Q8TC90 406 aaPredicted RBP33.37■■■□□ 2.93
PPFIA3-211ENST00000602848 ABCC2Q92887 1545 aa33.36■■■□□ 2.93
PPFIA3-211ENST00000602848 UHRF1BP1LA0JNW5 1464 aa33.36■■■□□ 2.93
PPFIA3-211ENST00000602848 TCOF1Q13428 1488 aaKnown RBP33.33■■■□□ 2.93
PPFIA3-211ENST00000602848 PTPN23Q9H3S7 1636 aa33.31■■■□□ 2.92
PPFIA3-211ENST00000602848 ITGAEP38570 1179 aa33.25■■■□□ 2.91
PPFIA3-211ENST00000602848 KIF14Q15058 1648 aa33.22■■■□□ 2.91
PPFIA3-211ENST00000602848 ITSN2Q9NZM3 1697 aa33.21■■■□□ 2.91
PPFIA3-211ENST00000602848 KDM5BQ9UGL1 1544 aa33.17■■■□□ 2.9
PPFIA3-211ENST00000602848 SETD5Q9C0A6 1442 aa33.17■■■□□ 2.9
PPFIA3-211ENST00000602848 GPATCH8Q9UKJ3 1502 aaKnown RBP33.15■■■□□ 2.9
PPFIA3-211ENST00000602848 ABCC10Q5T3U5 1492 aa33.14■■■□□ 2.9
PPFIA3-211ENST00000602848 CLSPNQ9HAW4 1339 aa33.09■■■□□ 2.89
PPFIA3-211ENST00000602848 ZCCHC11Q5TAX3 1644 aaKnown RBP33.09■■■□□ 2.89
PPFIA3-211ENST00000602848 CFDP1Q9UEE9 299 aaPredicted RBP33.08■■■□□ 2.89
PPFIA3-211ENST00000602848 RAB3GAP2Q9H2M9 1393 aa33.07■■■□□ 2.88
PPFIA3-211ENST00000602848 PTPRKQ15262 1439 aa33.05■■■□□ 2.88
PPFIA3-211ENST00000602848 MAPKBP1O60336 1514 aa33.05■■■□□ 2.88
PPFIA3-211ENST00000602848 NPM1P06748 294 aaKnown RBP eCLIP33.04■■■□□ 2.88
PPFIA3-211ENST00000602848 HFM1A2PYH4 1435 aa33.03■■■□□ 2.88
PPFIA3-211ENST00000602848 AKNAQ7Z591 1439 aa33.02■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms