RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 FBLN2P98095 1184 aa27.62■■■□□ 2.01
PPFIA3-207ENST00000602716 CHMP7Q8WUX9 453 aaPredicted RBP27.61■■■□□ 2.01
PPFIA3-207ENST00000602716 CEP170Q5SW79 1584 aa27.59■■■□□ 2.01
PPFIA3-207ENST00000602716 ARHGAP35Q9NRY4 1499 aa27.59■■■□□ 2.01
PPFIA3-207ENST00000602716 ARAP1Q96P48 1450 aa27.57■■■□□ 2
PPFIA3-207ENST00000602716 CHD1O14646 1710 aa27.55■■■□□ 2
PPFIA3-207ENST00000602716 NUP160Q12769 1436 aa27.52■■■□□ 2
PPFIA3-207ENST00000602716 IQGAP2Q13576 1575 aa27.52■■■□□ 2
PPFIA3-207ENST00000602716 KIAA0586Q9BVV6 1533 aa27.47■■□□□ 1.99
PPFIA3-207ENST00000602716 VPS8Q8N3P4 1428 aa27.43■■□□□ 1.98
PPFIA3-207ENST00000602716 SAMD9Q5K651 1589 aa27.43■■□□□ 1.98
PPFIA3-207ENST00000602716 P3H3Q8IVL6 736 aa27.43■■□□□ 1.98
PPFIA3-207ENST00000602716 FHOD3Q2V2M9 1422 aa27.42■■□□□ 1.98
PPFIA3-207ENST00000602716 EFCAB5A4FU69 1503 aa27.42■■□□□ 1.98
PPFIA3-207ENST00000602716 UGGT2Q9NYU1 1516 aa27.37■■□□□ 1.97
PPFIA3-207ENST00000602716 DISP1Q96F81 1524 aa27.31■■□□□ 1.96
PPFIA3-207ENST00000602716 KIAA0556O60303 1618 aa27.27■■□□□ 1.96
PPFIA3-207ENST00000602716 PPARGC1BQ86YN6 1023 aaKnown RBP27.26■■□□□ 1.95
PPFIA3-207ENST00000602716 CLASP1Q7Z460 1538 aa27.25■■□□□ 1.95
PPFIA3-207ENST00000602716 PCF11O94913 1555 aaKnown RBP27.23■■□□□ 1.95
PPFIA3-207ENST00000602716 JPH4Q96JJ6 628 aa27.23■■□□□ 1.95
PPFIA3-207ENST00000602716 SHROOM2Q13796 1616 aa27.18■■□□□ 1.94
PPFIA3-207ENST00000602716 FMN1Q68DA7 1419 aa27.14■■□□□ 1.94
PPFIA3-207ENST00000602716 PRG4Q92954 1404 aaPredicted RBP27.14■■□□□ 1.94
PPFIA3-207ENST00000602716 ERCC6L2Q5T890 1561 aa27.12■■□□□ 1.93
PPFIA3-207ENST00000602716 TTBK1Q5TCY1 1321 aaPredicted RBP27.12■■□□□ 1.93
PPFIA3-207ENST00000602716 CASKIN1Q8WXD9 1431 aa27.1■■□□□ 1.93
PPFIA3-207ENST00000602716 FYCO1Q9BQS8 1478 aa27.09■■□□□ 1.93
PPFIA3-207ENST00000602716 CARMIL2Q6F5E8 1435 aa27.09■■□□□ 1.93
PPFIA3-207ENST00000602716 HRCP23327 699 aa27.07■■□□□ 1.92
PPFIA3-207ENST00000602716 ATP1B4Q9UN42 357 aaPredicted RBP27.02■■□□□ 1.92
PPFIA3-207ENST00000602716 LRRIQ1Q96JM4 1722 aa27.01■■□□□ 1.91
PPFIA3-207ENST00000602716 TIAM1Q13009 1591 aa27.01■■□□□ 1.91
PPFIA3-207ENST00000602716 KANK4Q5T7N3 995 aaPredicted RBP27■■□□□ 1.91
PPFIA3-207ENST00000602716 OSCARQ8IYS5 282 aa26.99■■□□□ 1.91
PPFIA3-207ENST00000602716 APLP2Q06481 763 aa26.99■■□□□ 1.91
PPFIA3-207ENST00000602716 PLB1Q6P1J6 1458 aa26.98■■□□□ 1.91
PPFIA3-207ENST00000602716 CFAP43Q8NDM7 1665 aa26.98■■□□□ 1.91
PPFIA3-207ENST00000602716 PCGF6Q9BYE7 350 aa26.97■■□□□ 1.91
PPFIA3-207ENST00000602716 HECW1Q76N89 1606 aa26.95■■□□□ 1.9
PPFIA3-207ENST00000602716 RAPGEF6Q8TEU7 1601 aa26.94■■□□□ 1.9
PPFIA3-207ENST00000602716 MAP3K1Q13233 1512 aa26.92■■□□□ 1.9
PPFIA3-207ENST00000602716 NUP153P49790 1475 aaKnown RBP26.92■■□□□ 1.9
PPFIA3-207ENST00000602716 ARID3CA6NKF2 412 aa26.91■■□□□ 1.9
PPFIA3-207ENST00000602716 CDK13Q14004 1512 aaKnown RBP26.9■■□□□ 1.9
PPFIA3-207ENST00000602716 PTPRGP23470 1445 aa26.9■■□□□ 1.9
PPFIA3-207ENST00000602716 ABCA8O94911 1581 aa26.89■■□□□ 1.89
PPFIA3-207ENST00000602716 EPRSP07814 1512 aaKnown RBP26.87■■□□□ 1.89
PPFIA3-207ENST00000602716 LRRC9Q6ZRR7 1453 aa26.87■■□□□ 1.89
PPFIA3-207ENST00000602716 MAGI3Q5TCQ9 1506 aa26.83■■□□□ 1.89
PPFIA3-207ENST00000602716 CCDC18Q5T9S5 1454 aa26.82■■□□□ 1.88
PPFIA3-207ENST00000602716 TRIM26Q12899 539 aaPredicted RBP26.8■■□□□ 1.88
PPFIA3-207ENST00000602716 UACAQ9BZF9 1416 aa26.75■■□□□ 1.87
PPFIA3-207ENST00000602716 MTUS2Q5JR59 1369 aa26.72■■□□□ 1.87
PPFIA3-207ENST00000602716 ABCC2Q92887 1545 aa26.71■■□□□ 1.87
PPFIA3-207ENST00000602716 EHBP1L1Q8N3D4 1523 aa26.7■■□□□ 1.87
PPFIA3-207ENST00000602716 ATP10BO94823 1461 aa26.7■■□□□ 1.86
PPFIA3-207ENST00000602716 ARHGEF11O15085 1522 aa26.68■■□□□ 1.86
PPFIA3-207ENST00000602716 PHLDB1Q86UU1 1377 aa26.67■■□□□ 1.86
PPFIA3-207ENST00000602716 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.65■■□□□ 1.86
PPFIA3-207ENST00000602716 HNRNPUL2Q1KMD3 747 aaKnown RBP26.65■■□□□ 1.86
PPFIA3-207ENST00000602716 ADCY10Q96PN6 1610 aa26.62■■□□□ 1.85
PPFIA3-207ENST00000602716 UHRF1BP1LA0JNW5 1464 aa26.61■■□□□ 1.85
PPFIA3-207ENST00000602716 NCOA2Q15596 1464 aa26.61■■□□□ 1.85
PPFIA3-207ENST00000602716 SUPT6HQ7KZ85 1726 aaKnown RBP26.58■■□□□ 1.85
PPFIA3-207ENST00000602716 RIMBP3CA6NJZ7 1639 aa26.56■■□□□ 1.84
PPFIA3-207ENST00000602716 RIMBP3BA6NNM3 1639 aa26.56■■□□□ 1.84
PPFIA3-207ENST00000602716 RIMBP3Q9UFD9 1639 aa26.56■■□□□ 1.84
PPFIA3-207ENST00000602716 TROQ12816 1431 aaPredicted RBP26.56■■□□□ 1.84
PPFIA3-207ENST00000602716 RRBP1Q9P2E9 1410 aaKnown RBP26.55■■□□□ 1.84
PPFIA3-207ENST00000602716 ZCCHC11Q5TAX3 1644 aaKnown RBP26.54■■□□□ 1.84
PPFIA3-207ENST00000602716 KDM5BQ9UGL1 1544 aa26.54■■□□□ 1.84
PPFIA3-207ENST00000602716 KIF14Q15058 1648 aa26.54■■□□□ 1.84
PPFIA3-207ENST00000602716 CDK11AQ9UQ88 783 aaPredicted RBP26.5■■□□□ 1.83
PPFIA3-207ENST00000602716 CCNB3Q8WWL7 1395 aa26.48■■□□□ 1.83
PPFIA3-207ENST00000602716 MYOM3Q5VTT5 1437 aa26.46■■□□□ 1.83
PPFIA3-207ENST00000602716 PLEKHD1A6NEE1 506 aa26.44■■□□□ 1.82
PPFIA3-207ENST00000602716 FGD6Q6ZV73 1430 aa26.44■■□□□ 1.82
PPFIA3-207ENST00000602716 ABCC10Q5T3U5 1492 aa26.4■■□□□ 1.82
PPFIA3-207ENST00000602716 CYB5RLQ6IPT4 315 aa26.38■■□□□ 1.81
PPFIA3-207ENST00000602716 FAM50AQ14320 339 aaKnown RBP26.34■■□□□ 1.81
PPFIA3-207ENST00000602716 TTC37Q6PGP7 1564 aa26.34■■□□□ 1.81
PPFIA3-207ENST00000602716 GPATCH8Q9UKJ3 1502 aaKnown RBP26.33■■□□□ 1.81
PPFIA3-207ENST00000602716 PTPN23Q9H3S7 1636 aa26.33■■□□□ 1.8
PPFIA3-207ENST00000602716 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.31■■□□□ 1.8
PPFIA3-207ENST00000602716 WDR7Q9Y4E6 1490 aa26.31■■□□□ 1.8
PPFIA3-207ENST00000602716 ASXL2Q76L83 1435 aa26.3■■□□□ 1.8
PPFIA3-207ENST00000602716 ITGAEP38570 1179 aa26.29■■□□□ 1.8
PPFIA3-207ENST00000602716 KCNH8Q96L42 1107 aa26.29■■□□□ 1.8
PPFIA3-207ENST00000602716 TCOF1Q13428 1488 aaKnown RBP26.28■■□□□ 1.8
PPFIA3-207ENST00000602716 CDC42BPAQ5VT25 1732 aa26.28■■□□□ 1.8
PPFIA3-207ENST00000602716 MIA2Q96PC5 1412 aa26.27■■□□□ 1.8
PPFIA3-207ENST00000602716 ITSN2Q9NZM3 1697 aa26.26■■□□□ 1.79
PPFIA3-207ENST00000602716 ZNF644Q9H582 1327 aaPredicted RBP26.25■■□□□ 1.79
PPFIA3-207ENST00000602716 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.24■■□□□ 1.79
PPFIA3-207ENST00000602716 PREX2Q70Z35 1606 aa26.21■■□□□ 1.79
PPFIA3-207ENST00000602716 NPM1P06748 294 aaKnown RBP eCLIP26.21■■□□□ 1.79
PPFIA3-207ENST00000602716 PTPRKQ15262 1439 aa26.2■■□□□ 1.78
PPFIA3-207ENST00000602716 CAMSAP2Q08AD1 1489 aa26.2■■□□□ 1.78
PPFIA3-207ENST00000602716 CFDP1Q9UEE9 299 aaPredicted RBP26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms