RNA–Protein interactions for RNA: ENST00000602169.1

CALM3-213, Transcript of calmodulin 3, humanhuman

TSL 2

Gene CALM3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3-213ENST00000602169 KIF21BO75037 1637 aa21.85■■□□□ 1.09
CALM3-213ENST00000602169 CLASP1Q7Z460 1538 aa21.8■■□□□ 1.08
CALM3-213ENST00000602169 ARAP1Q96P48 1450 aa21.8■■□□□ 1.08
CALM3-213ENST00000602169 CYB5RLQ6IPT4 315 aa21.79■■□□□ 1.08
CALM3-213ENST00000602169 KIAA0586Q9BVV6 1533 aa21.78■■□□□ 1.08
CALM3-213ENST00000602169 CEP170Q5SW79 1584 aa21.78■■□□□ 1.08
CALM3-213ENST00000602169 GOLGA3Q08378 1498 aa21.77■■□□□ 1.07
CALM3-213ENST00000602169 IQGAP2Q13576 1575 aa21.65■■□□□ 1.06
CALM3-213ENST00000602169 JPH4Q96JJ6 628 aa21.64■■□□□ 1.05
CALM3-213ENST00000602169 SHROOM2Q13796 1616 aa21.62■■□□□ 1.05
CALM3-213ENST00000602169 UBTFP17480 764 aaKnown RBP21.62■■□□□ 1.05
CALM3-213ENST00000602169 UGGT2Q9NYU1 1516 aa21.6■■□□□ 1.05
CALM3-213ENST00000602169 ERCC6L2Q5T890 1561 aa21.6■■□□□ 1.05
CALM3-213ENST00000602169 TNIKQ9UKE5 1360 aa21.6■■□□□ 1.05
CALM3-213ENST00000602169 CTTNBP2Q8WZ74 1663 aa21.59■■□□□ 1.05
CALM3-213ENST00000602169 PRG4Q92954 1404 aaPredicted RBP21.55■■□□□ 1.04
CALM3-213ENST00000602169 CARMIL2Q6F5E8 1435 aa21.53■■□□□ 1.04
CALM3-213ENST00000602169 TRHP20396 242 aaPredicted RBP21.51■■□□□ 1.03
CALM3-213ENST00000602169 DISP1Q96F81 1524 aa21.49■■□□□ 1.03
CALM3-213ENST00000602169 LOC105371045A0A1W2PR82 267 aa21.47■■□□□ 1.03
CALM3-213ENST00000602169 EHMT2Q96KQ7 1210 aa21.47■■□□□ 1.03
CALM3-213ENST00000602169 EFCAB5A4FU69 1503 aa21.46■■□□□ 1.03
CALM3-213ENST00000602169 SAMD9Q5K651 1589 aa21.43■■□□□ 1.02
CALM3-213ENST00000602169 KIAA0556O60303 1618 aa21.42■■□□□ 1.02
CALM3-213ENST00000602169 CLIP1P30622 1438 aa21.38■■□□□ 1.01
CALM3-213ENST00000602169 PTPRGP23470 1445 aa21.37■■□□□ 1.01
CALM3-213ENST00000602169 CEP162Q5TB80 1403 aa21.37■■□□□ 1.01
CALM3-213ENST00000602169 ARHGAP35Q9NRY4 1499 aa21.36■■□□□ 1.01
CALM3-213ENST00000602169 RANGAP1P46060 587 aaPredicted RBP21.3■■□□□ 1
CALM3-213ENST00000602169 FHOD3Q2V2M9 1422 aa21.29■■□□□ 1
CALM3-213ENST00000602169 FMN1Q68DA7 1419 aa21.28■■□□□ 1
CALM3-213ENST00000602169 P3H3Q8IVL6 736 aa21.26■□□□□ 0.99
CALM3-213ENST00000602169 UHRF1BP1LA0JNW5 1464 aa21.24■□□□□ 0.99
CALM3-213ENST00000602169 UACAQ9BZF9 1416 aa21.23■□□□□ 0.99
CALM3-213ENST00000602169 ABCA8O94911 1581 aa21.19■□□□□ 0.98
CALM3-213ENST00000602169 PLB1Q6P1J6 1458 aa21.18■□□□□ 0.98
CALM3-213ENST00000602169 ABCC2Q92887 1545 aa21.18■□□□□ 0.98
CALM3-213ENST00000602169 TTBK1Q5TCY1 1321 aaPredicted RBP21.15■□□□□ 0.98
CALM3-213ENST00000602169 CASKIN1Q8WXD9 1431 aa21.13■□□□□ 0.97
CALM3-213ENST00000602169 ADCY10Q96PN6 1610 aa21.13■□□□□ 0.97
CALM3-213ENST00000602169 KIF13AQ9H1H9 1805 aa21.12■□□□□ 0.97
CALM3-213ENST00000602169 VPS8Q8N3P4 1428 aa21.12■□□□□ 0.97
CALM3-213ENST00000602169 KDM5BQ9UGL1 1544 aa21.11■□□□□ 0.97
CALM3-213ENST00000602169 RAPGEF6Q8TEU7 1601 aa21.11■□□□□ 0.97
CALM3-213ENST00000602169 FYCO1Q9BQS8 1478 aa21.1■□□□□ 0.97
CALM3-213ENST00000602169 NUP153P49790 1475 aaKnown RBP21.09■□□□□ 0.97
CALM3-213ENST00000602169 NPM1P06748 294 aaKnown RBP eCLIP21.07■□□□□ 0.96
CALM3-213ENST00000602169 HECW1Q76N89 1606 aa21.05■□□□□ 0.96
CALM3-213ENST00000602169 ATP10BO94823 1461 aa21.03■□□□□ 0.96
CALM3-213ENST00000602169 PCF11O94913 1555 aaKnown RBP21.02■□□□□ 0.96
CALM3-213ENST00000602169 CCDC18Q5T9S5 1454 aa21.01■□□□□ 0.95
CALM3-213ENST00000602169 MAPKBP1O60336 1514 aa21■□□□□ 0.95
CALM3-213ENST00000602169 EPRSP07814 1512 aaKnown RBP21■□□□□ 0.95
CALM3-213ENST00000602169 DIP2BQ9P265 1576 aa20.97■□□□□ 0.95
CALM3-213ENST00000602169 CDK11AQ9UQ88 783 aaPredicted RBP20.95■□□□□ 0.94
CALM3-213ENST00000602169 ZCCHC11Q5TAX3 1644 aaKnown RBP20.95■□□□□ 0.94
CALM3-213ENST00000602169 ABCC10Q5T3U5 1492 aa20.94■□□□□ 0.94
CALM3-213ENST00000602169 MAP3K1Q13233 1512 aa20.94■□□□□ 0.94
CALM3-213ENST00000602169 FAM69CQ0P6D2 419 aa20.94■□□□□ 0.94
CALM3-213ENST00000602169 ATP1B4Q9UN42 357 aaPredicted RBP20.93■□□□□ 0.94
CALM3-213ENST00000602169 ASXL2Q76L83 1435 aa20.93■□□□□ 0.94
CALM3-213ENST00000602169 TSPOAP1O95153 1857 aa20.91■□□□□ 0.94
CALM3-213ENST00000602169 CDK13Q14004 1512 aaKnown RBP20.9■□□□□ 0.94
CALM3-213ENST00000602169 WDR7Q9Y4E6 1490 aa20.9■□□□□ 0.94
CALM3-213ENST00000602169 PLEKHD1A6NEE1 506 aa20.9■□□□□ 0.94
CALM3-213ENST00000602169 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.89■□□□□ 0.93
CALM3-213ENST00000602169 HNRNPUL2Q1KMD3 747 aaKnown RBP20.89■□□□□ 0.93
CALM3-213ENST00000602169 ARID3CA6NKF2 412 aa20.87■□□□□ 0.93
CALM3-213ENST00000602169 TROQ12816 1431 aaPredicted RBP20.85■□□□□ 0.93
CALM3-213ENST00000602169 APLP2Q06481 763 aa20.84■□□□□ 0.93
CALM3-213ENST00000602169 TIAM1Q13009 1591 aa20.84■□□□□ 0.93
CALM3-213ENST00000602169 LRRIQ1Q96JM4 1722 aa20.83■□□□□ 0.92
CALM3-213ENST00000602169 CFAP43Q8NDM7 1665 aa20.8■□□□□ 0.92
CALM3-213ENST00000602169 GLI2P10070 1586 aa20.8■□□□□ 0.92
CALM3-213ENST00000602169 MTUS2Q5JR59 1369 aa20.79■□□□□ 0.92
CALM3-213ENST00000602169 LRRC9Q6ZRR7 1453 aa20.78■□□□□ 0.92
CALM3-213ENST00000602169 MAGI3Q5TCQ9 1506 aa20.77■□□□□ 0.92
CALM3-213ENST00000602169 EHBP1L1Q8N3D4 1523 aa20.77■□□□□ 0.92
CALM3-213ENST00000602169 KDM6BO15054 1643 aa20.75■□□□□ 0.91
CALM3-213ENST00000602169 PPRC1Q5VV67 1664 aaKnown RBP20.74■□□□□ 0.91
CALM3-213ENST00000602169 KCNH8Q96L42 1107 aa20.73■□□□□ 0.91
CALM3-213ENST00000602169 KIF14Q15058 1648 aa20.71■□□□□ 0.91
CALM3-213ENST00000602169 KANK4Q5T7N3 995 aaPredicted RBP20.71■□□□□ 0.91
CALM3-213ENST00000602169 ABCA9Q8IUA7 1624 aa20.71■□□□□ 0.91
CALM3-213ENST00000602169 AEBP2Q6ZN18 517 aaPredicted RBP20.69■□□□□ 0.9
CALM3-213ENST00000602169 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.68■□□□□ 0.91e-10■■■■□ 20.4
CALM3-213ENST00000602169 CD109Q6YHK3 1445 aa20.66■□□□□ 0.9
CALM3-213ENST00000602169 ARAP3Q8WWN8 1544 aa20.65■□□□□ 0.9
CALM3-213ENST00000602169 MAP3K4Q9Y6R4 1608 aa20.64■□□□□ 0.9
CALM3-213ENST00000602169 NCOA2Q15596 1464 aa20.63■□□□□ 0.89
CALM3-213ENST00000602169 PLCH2O75038 1416 aa20.63■□□□□ 0.89
CALM3-213ENST00000602169 SUPT6HQ7KZ85 1726 aaKnown RBP20.62■□□□□ 0.89
CALM3-213ENST00000602169 TTC37Q6PGP7 1564 aa20.61■□□□□ 0.89
CALM3-213ENST00000602169 PHLDB1Q86UU1 1377 aa20.6■□□□□ 0.89
CALM3-213ENST00000602169 CCNB3Q8WWL7 1395 aa20.59■□□□□ 0.89
CALM3-213ENST00000602169 GPATCH8Q9UKJ3 1502 aaKnown RBP20.59■□□□□ 0.89
CALM3-213ENST00000602169 TEX14Q8IWB6 1497 aa20.59■□□□□ 0.89
CALM3-213ENST00000602169 COL17A1Q9UMD9 1497 aaPredicted RBP20.56■□□□□ 0.88
CALM3-213ENST00000602169 NEO1Q92859 1461 aa20.56■□□□□ 0.88
CALM3-213ENST00000602169 EFCAB2Q5VUJ9 269 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms