RNA–Protein interactions for RNA: ENST00000602086.5

ZNF548-212, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-212ENST00000602086 FBLN2P98095 1184 aa23.03■■□□□ 1.28
ZNF548-212ENST00000602086 CYB5RLQ6IPT4 315 aa23.03■■□□□ 1.28
ZNF548-212ENST00000602086 ADAMTS12P58397 1594 aa23.02■■□□□ 1.28
ZNF548-212ENST00000602086 MAGI1Q96QZ7 1491 aaPredicted RBP22.99■■□□□ 1.27
ZNF548-212ENST00000602086 SNAPC4Q5SXM2 1469 aa22.97■■□□□ 1.27
ZNF548-212ENST00000602086 CTTNBP2Q8WZ74 1663 aa22.91■■□□□ 1.26
ZNF548-212ENST00000602086 CLIP1P30622 1438 aa22.91■■□□□ 1.26
ZNF548-212ENST00000602086 CLASP1Q7Z460 1538 aa22.89■■□□□ 1.26
ZNF548-212ENST00000602086 TRHP20396 242 aaPredicted RBP22.87■■□□□ 1.25
ZNF548-212ENST00000602086 SYNJ2O15056 1496 aa22.86■■□□□ 1.25
ZNF548-212ENST00000602086 GRIN2AQ12879 1464 aa22.83■■□□□ 1.25
ZNF548-212ENST00000602086 EFCAB5A4FU69 1503 aa22.77■■□□□ 1.24
ZNF548-212ENST00000602086 CHMP7Q8WUX9 453 aaPredicted RBP22.75■■□□□ 1.23
ZNF548-212ENST00000602086 ARHGAP35Q9NRY4 1499 aa22.74■■□□□ 1.23
ZNF548-212ENST00000602086 KIAA0586Q9BVV6 1533 aa22.72■■□□□ 1.23
ZNF548-212ENST00000602086 IQGAP2Q13576 1575 aa22.72■■□□□ 1.23
ZNF548-212ENST00000602086 NUP160Q12769 1436 aa22.72■■□□□ 1.23
ZNF548-212ENST00000602086 VPS8Q8N3P4 1428 aa22.72■■□□□ 1.23
ZNF548-212ENST00000602086 SAMD9Q5K651 1589 aa22.68■■□□□ 1.22
ZNF548-212ENST00000602086 CEP170Q5SW79 1584 aa22.66■■□□□ 1.22
ZNF548-212ENST00000602086 UGGT2Q9NYU1 1516 aa22.66■■□□□ 1.22
ZNF548-212ENST00000602086 ERCC6L2Q5T890 1561 aa22.6■■□□□ 1.21
ZNF548-212ENST00000602086 RANGAP1P46060 587 aaPredicted RBP22.59■■□□□ 1.21
ZNF548-212ENST00000602086 FMN1Q68DA7 1419 aa22.52■■□□□ 1.2
ZNF548-212ENST00000602086 FHOD3Q2V2M9 1422 aa22.5■■□□□ 1.19
ZNF548-212ENST00000602086 DISP1Q96F81 1524 aa22.49■■□□□ 1.19
ZNF548-212ENST00000602086 KIAA0556O60303 1618 aa22.49■■□□□ 1.19
ZNF548-212ENST00000602086 MAP3K1Q13233 1512 aa22.47■■□□□ 1.19
ZNF548-212ENST00000602086 JPH4Q96JJ6 628 aa22.45■■□□□ 1.18
ZNF548-212ENST00000602086 CASKIN1Q8WXD9 1431 aa22.45■■□□□ 1.18
ZNF548-212ENST00000602086 FYCO1Q9BQS8 1478 aa22.45■■□□□ 1.18
ZNF548-212ENST00000602086 SHROOM2Q13796 1616 aa22.44■■□□□ 1.18
ZNF548-212ENST00000602086 CARMIL2Q6F5E8 1435 aa22.44■■□□□ 1.18
ZNF548-212ENST00000602086 APLP2Q06481 763 aa22.42■■□□□ 1.18
ZNF548-212ENST00000602086 P3H3Q8IVL6 736 aa22.41■■□□□ 1.18
ZNF548-212ENST00000602086 PCF11O94913 1555 aaKnown RBP22.41■■□□□ 1.18
ZNF548-212ENST00000602086 KIF13AQ9H1H9 1805 aa22.36■■□□□ 1.17
ZNF548-212ENST00000602086 TIAM1Q13009 1591 aa22.33■■□□□ 1.17
ZNF548-212ENST00000602086 CFAP43Q8NDM7 1665 aa22.33■■□□□ 1.17
ZNF548-212ENST00000602086 TRIM26Q12899 539 aaPredicted RBP22.33■■□□□ 1.17
ZNF548-212ENST00000602086 AEBP2Q6ZN18 517 aaPredicted RBP22.33■■□□□ 1.17
ZNF548-212ENST00000602086 PRG4Q92954 1404 aaPredicted RBP22.31■■□□□ 1.16
ZNF548-212ENST00000602086 HECW1Q76N89 1606 aa22.3■■□□□ 1.16
ZNF548-212ENST00000602086 CCDC18Q5T9S5 1454 aa22.28■■□□□ 1.16
ZNF548-212ENST00000602086 RAPGEF6Q8TEU7 1601 aa22.24■■□□□ 1.15
ZNF548-212ENST00000602086 LRRC9Q6ZRR7 1453 aa22.22■■□□□ 1.15
ZNF548-212ENST00000602086 LRRIQ1Q96JM4 1722 aa22.22■■□□□ 1.15
ZNF548-212ENST00000602086 ABCA8O94911 1581 aa22.2■■□□□ 1.14
ZNF548-212ENST00000602086 PPARGC1BQ86YN6 1023 aaKnown RBP22.19■■□□□ 1.14
ZNF548-212ENST00000602086 EPRSP07814 1512 aaKnown RBP22.18■■□□□ 1.14
ZNF548-212ENST00000602086 PTPRGP23470 1445 aa22.18■■□□□ 1.14
ZNF548-212ENST00000602086 KANK4Q5T7N3 995 aaPredicted RBP22.18■■□□□ 1.14
ZNF548-212ENST00000602086 NUP153P49790 1475 aaKnown RBP22.16■■□□□ 1.14
ZNF548-212ENST00000602086 ATP1B4Q9UN42 357 aaPredicted RBP22.14■■□□□ 1.13
ZNF548-212ENST00000602086 ADCY10Q96PN6 1610 aa22.13■■□□□ 1.13
ZNF548-212ENST00000602086 PLB1Q6P1J6 1458 aa22.13■■□□□ 1.13
ZNF548-212ENST00000602086 EHBP1L1Q8N3D4 1523 aa22.11■■□□□ 1.13
ZNF548-212ENST00000602086 PCGF6Q9BYE7 350 aa22.11■■□□□ 1.13
ZNF548-212ENST00000602086 DIP2BQ9P265 1576 aa22.08■■□□□ 1.13
ZNF548-212ENST00000602086 UACAQ9BZF9 1416 aa22.08■■□□□ 1.13
ZNF548-212ENST00000602086 TSPOAP1O95153 1857 aa22.08■■□□□ 1.13
ZNF548-212ENST00000602086 MTUS2Q5JR59 1369 aa22.07■■□□□ 1.12
ZNF548-212ENST00000602086 CDK13Q14004 1512 aaKnown RBP22.06■■□□□ 1.12
ZNF548-212ENST00000602086 UHRF1BP1LA0JNW5 1464 aa22.05■■□□□ 1.12
ZNF548-212ENST00000602086 MAPKBP1O60336 1514 aa22.05■■□□□ 1.12
ZNF548-212ENST00000602086 CDK11AQ9UQ88 783 aaPredicted RBP22.04■■□□□ 1.12
ZNF548-212ENST00000602086 ABCC2Q92887 1545 aa22.04■■□□□ 1.12
ZNF548-212ENST00000602086 RRBP1Q9P2E9 1410 aaKnown RBP22.04■■□□□ 1.12
ZNF548-212ENST00000602086 ABCC10Q5T3U5 1492 aa22.03■■□□□ 1.12
ZNF548-212ENST00000602086 SUPT6HQ7KZ85 1726 aaKnown RBP22.03■■□□□ 1.12
ZNF548-212ENST00000602086 TTBK1Q5TCY1 1321 aaPredicted RBP22.02■■□□□ 1.12
ZNF548-212ENST00000602086 MAGI3Q5TCQ9 1506 aa22.01■■□□□ 1.11
ZNF548-212ENST00000602086 FAM69CQ0P6D2 419 aa22■■□□□ 1.11
ZNF548-212ENST00000602086 ATP10BO94823 1461 aa22■■□□□ 1.11
ZNF548-212ENST00000602086 TROQ12816 1431 aaPredicted RBP21.97■■□□□ 1.11
ZNF548-212ENST00000602086 NCOA2Q15596 1464 aa21.96■■□□□ 1.11
ZNF548-212ENST00000602086 KDM6BO15054 1643 aa21.96■■□□□ 1.11
ZNF548-212ENST00000602086 PHLDB1Q86UU1 1377 aa21.95■■□□□ 1.1
ZNF548-212ENST00000602086 NPM1P06748 294 aaKnown RBP eCLIP21.94■■□□□ 1.1
ZNF548-212ENST00000602086 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.94■■□□□ 1.1
ZNF548-212ENST00000602086 KDM5BQ9UGL1 1544 aa21.93■■□□□ 1.1
ZNF548-212ENST00000602086 CCNB3Q8WWL7 1395 aa21.92■■□□□ 1.1
ZNF548-212ENST00000602086 MYOM3Q5VTT5 1437 aa21.89■■□□□ 1.1
ZNF548-212ENST00000602086 PLEKHD1A6NEE1 506 aa21.88■■□□□ 1.09
ZNF548-212ENST00000602086 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.87■■□□□ 1.09
ZNF548-212ENST00000602086 HNRNPUL2Q1KMD3 747 aaKnown RBP21.87■■□□□ 1.09
ZNF548-212ENST00000602086 FGD6Q6ZV73 1430 aa21.86■■□□□ 1.09
ZNF548-212ENST00000602086 ZCCHC11Q5TAX3 1644 aaKnown RBP21.85■■□□□ 1.09
ZNF548-212ENST00000602086 ARID3CA6NKF2 412 aa21.85■■□□□ 1.09
ZNF548-212ENST00000602086 MIA2Q96PC5 1412 aa21.85■■□□□ 1.09
ZNF548-212ENST00000602086 KIF14Q15058 1648 aa21.83■■□□□ 1.08
ZNF548-212ENST00000602086 PPRC1Q5VV67 1664 aaKnown RBP21.82■■□□□ 1.08
ZNF548-212ENST00000602086 ITSN2Q9NZM3 1697 aa21.8■■□□□ 1.08
ZNF548-212ENST00000602086 TCOF1Q13428 1488 aaKnown RBP21.8■■□□□ 1.08
ZNF548-212ENST00000602086 PTPN23Q9H3S7 1636 aa21.77■■□□□ 1.07
ZNF548-212ENST00000602086 ASXL2Q76L83 1435 aa21.73■■□□□ 1.07
ZNF548-212ENST00000602086 KDM4FA0A1W2PPD8 638 aa21.73■■□□□ 1.07
ZNF548-212ENST00000602086 GPATCH8Q9UKJ3 1502 aaKnown RBP21.73■■□□□ 1.07
ZNF548-212ENST00000602086 CDC42BPAQ5VT25 1732 aa21.71■■□□□ 1.07
ZNF548-212ENST00000602086 WDR7Q9Y4E6 1490 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms