RNA–Protein interactions for RNA: ENST00000601953.5

CAPN12-212, Transcript of calpain 12, humanhuman

TSL 5 BASIC

Gene CAPN12, Length 2,381 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-212ENST00000601953 BCL11AQ9H165 835 aa32.48■■■□□ 2.79
CAPN12-212ENST00000601953 RRBP1Q9P2E9 1410 aaKnown RBP32.48■■■□□ 2.79
CAPN12-212ENST00000601953 MAP3K1Q13233 1512 aa32.44■■■□□ 2.78
CAPN12-212ENST00000601953 SUPT16HQ9Y5B9 1047 aaKnown RBP32.39■■■□□ 2.78
CAPN12-212ENST00000601953 CUL7Q14999 1698 aa32.38■■■□□ 2.77
CAPN12-212ENST00000601953 URB2Q14146 1524 aaKnown RBP32.38■■■□□ 2.77
CAPN12-212ENST00000601953 TIAM1Q13009 1591 aa32.34■■■□□ 2.77
CAPN12-212ENST00000601953 WDR97A6NE52 1622 aa32.34■■■□□ 2.77
CAPN12-212ENST00000601953 PDS5BQ9NTI5 1447 aa32.32■■■□□ 2.76
CAPN12-212ENST00000601953 FHAD1B1AJZ9 1412 aa32.31■■■□□ 2.76
CAPN12-212ENST00000601953 TSHZ2Q9NRE2 1034 aa32.3■■■□□ 2.76
CAPN12-212ENST00000601953 CCNB3Q8WWL7 1395 aa32.28■■■□□ 2.76
CAPN12-212ENST00000601953 EFCAB5A4FU69 1503 aa32.24■■■□□ 2.75
CAPN12-212ENST00000601953 ABCA5Q8WWZ7 1642 aa32.21■■■□□ 2.75
CAPN12-212ENST00000601953 LRRC9Q6ZRR7 1453 aa32.2■■■□□ 2.75
CAPN12-212ENST00000601953 CTTNBP2Q8WZ74 1663 aa32.19■■■□□ 2.74
CAPN12-212ENST00000601953 DHX57Q6P158 1386 aaKnown RBP32.19■■■□□ 2.74
CAPN12-212ENST00000601953 DNAJC5BQ9UF47 199 aa32.17■■■□□ 2.74
CAPN12-212ENST00000601953 CFAP43Q8NDM7 1665 aa32.16■■■□□ 2.74
CAPN12-212ENST00000601953 PCF11O94913 1555 aaKnown RBP32.16■■■□□ 2.74
CAPN12-212ENST00000601953 KIF21AQ7Z4S6 1674 aa32.13■■■□□ 2.73
CAPN12-212ENST00000601953 AQRO60306 1485 aaKnown RBP eCLIP32.12■■■□□ 2.737e-8■■■■■ 28.1
CAPN12-212ENST00000601953 GAPVD1Q14C86 1478 aa32.11■■■□□ 2.73
CAPN12-212ENST00000601953 FYCO1Q9BQS8 1478 aa32.1■■■□□ 2.73
CAPN12-212ENST00000601953 FHOD3Q2V2M9 1422 aa32.1■■■□□ 2.73
CAPN12-212ENST00000601953 TDRD9Q8NDG6 1382 aaKnown RBP32.09■■■□□ 2.73
CAPN12-212ENST00000601953 CASKIN1Q8WXD9 1431 aa32.07■■■□□ 2.72
CAPN12-212ENST00000601953 P3H3Q8IVL6 736 aa32.07■■■□□ 2.72
CAPN12-212ENST00000601953 TARBP1Q13395 1621 aaKnown RBP32.02■■■□□ 2.72
CAPN12-212ENST00000601953 PHLDB1Q86UU1 1377 aa32.01■■■□□ 2.71
CAPN12-212ENST00000601953 FMN1Q68DA7 1419 aa31.99■■■□□ 2.71
CAPN12-212ENST00000601953 SAMD9Q5K651 1589 aa31.96■■■□□ 2.71
CAPN12-212ENST00000601953 SNAPC4Q5SXM2 1469 aa31.91■■■□□ 2.7
CAPN12-212ENST00000601953 ITGAEP38570 1179 aa31.89■■■□□ 2.7
CAPN12-212ENST00000601953 ATP1B4Q9UN42 357 aaPredicted RBP31.88■■■□□ 2.69
CAPN12-212ENST00000601953 RAB3GAP2Q9H2M9 1393 aa31.87■■■□□ 2.69
CAPN12-212ENST00000601953 MRC2Q9UBG0 1479 aa31.84■■■□□ 2.69
CAPN12-212ENST00000601953 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.83■■■□□ 2.695e-6■■■□□ 14.6
CAPN12-212ENST00000601953 SETD5Q9C0A6 1442 aa31.83■■■□□ 2.69
CAPN12-212ENST00000601953 PBRM1Q86U86 1689 aa31.8■■■□□ 2.68
CAPN12-212ENST00000601953 THOC2Q8NI27 1593 aaKnown RBP31.77■■■□□ 2.68
CAPN12-212ENST00000601953 FAM50AQ14320 339 aaKnown RBP31.76■■■□□ 2.68
CAPN12-212ENST00000601953 GRIN2BQ13224 1484 aa31.75■■■□□ 2.67
CAPN12-212ENST00000601953 MAPKBP1O60336 1514 aa31.72■■■□□ 2.67
CAPN12-212ENST00000601953 ADAMTS12P58397 1594 aa31.71■■■□□ 2.67
CAPN12-212ENST00000601953 LRRIQ1Q96JM4 1722 aa31.69■■■□□ 2.66
CAPN12-212ENST00000601953 MTUS2Q5JR59 1369 aa31.68■■■□□ 2.66
CAPN12-212ENST00000601953 FGD6Q6ZV73 1430 aa31.67■■■□□ 2.66
CAPN12-212ENST00000601953 IFT140Q96RY7 1462 aa31.63■■■□□ 2.65
CAPN12-212ENST00000601953 WDR62O43379 1518 aa31.62■■■□□ 2.65
CAPN12-212ENST00000601953 IQGAP2Q13576 1575 aa31.62■■■□□ 2.65
CAPN12-212ENST00000601953 EHBP1L1Q8N3D4 1523 aa31.58■■■□□ 2.65
CAPN12-212ENST00000601953 NCOA2Q15596 1464 aa31.56■■■□□ 2.64
CAPN12-212ENST00000601953 CCDC18Q5T9S5 1454 aa31.56■■■□□ 2.64
CAPN12-212ENST00000601953 SUPT6HQ7KZ85 1726 aaKnown RBP31.55■■■□□ 2.64
CAPN12-212ENST00000601953 MYOM3Q5VTT5 1437 aa31.53■■■□□ 2.64
CAPN12-212ENST00000601953 RBM19Q9Y4C8 960 aaKnown RBP31.51■■■□□ 2.64
CAPN12-212ENST00000601953 ZNF608Q9ULD9 1512 aaPredicted RBP31.5■■■□□ 2.63
CAPN12-212ENST00000601953 HECW1Q76N89 1606 aa31.5■■■□□ 2.63
CAPN12-212ENST00000601953 ARHGEF11O15085 1522 aa31.49■■■□□ 2.63
CAPN12-212ENST00000601953 UGGT2Q9NYU1 1516 aa31.49■■■□□ 2.63
CAPN12-212ENST00000601953 MAGI3Q5TCQ9 1506 aa31.45■■■□□ 2.63
CAPN12-212ENST00000601953 HFM1A2PYH4 1435 aa31.43■■■□□ 2.62
CAPN12-212ENST00000601953 PTPRKQ15262 1439 aa31.42■■■□□ 2.62
CAPN12-212ENST00000601953 TIMELESSQ9UNS1 1208 aa31.42■■■□□ 2.62
CAPN12-212ENST00000601953 FKBP8Q14318 412 aa31.41■■■□□ 2.62
CAPN12-212ENST00000601953 EPRSP07814 1512 aaKnown RBP31.41■■■□□ 2.62
CAPN12-212ENST00000601953 BCANQ96GW7 911 aa31.39■■■□□ 2.62
CAPN12-212ENST00000601953 KIAA0586Q9BVV6 1533 aa31.39■■■□□ 2.62
CAPN12-212ENST00000601953 PTPN23Q9H3S7 1636 aa31.37■■■□□ 2.61
CAPN12-212ENST00000601953 EIF4G3O43432 1585 aaKnown RBP31.35■■■□□ 2.61
CAPN12-212ENST00000601953 SIN3AQ96ST3 1273 aa31.34■■■□□ 2.61
CAPN12-212ENST00000601953 TCOF1Q13428 1488 aaKnown RBP31.33■■■□□ 2.61
CAPN12-212ENST00000601953 GRIN2AQ12879 1464 aa31.31■■■□□ 2.6
CAPN12-212ENST00000601953 NAIPQ13075 1403 aa31.31■■■□□ 2.6
CAPN12-212ENST00000601953 UACAQ9BZF9 1416 aa31.3■■■□□ 2.6
CAPN12-212ENST00000601953 KIAA0556O60303 1618 aa31.29■■■□□ 2.6
CAPN12-212ENST00000601953 ERCC6Q03468 1493 aa31.29■■■□□ 2.6
CAPN12-212ENST00000601953 DISP1Q96F81 1524 aa31.29■■■□□ 2.6
CAPN12-212ENST00000601953 CDK13Q14004 1512 aaKnown RBP31.27■■■□□ 2.6
CAPN12-212ENST00000601953 KCNH8Q96L42 1107 aa31.25■■■□□ 2.59
CAPN12-212ENST00000601953 MAGI1Q96QZ7 1491 aaPredicted RBP31.24■■■□□ 2.59
CAPN12-212ENST00000601953 NEFLP07196 543 aa31.24■■■□□ 2.59
CAPN12-212ENST00000601953 MIA2Q96PC5 1412 aa31.24■■■□□ 2.59
CAPN12-212ENST00000601953 MSH5O43196 834 aa31.2■■■□□ 2.59
CAPN12-212ENST00000601953 AKNAQ7Z591 1439 aa31.18■■■□□ 2.58
CAPN12-212ENST00000601953 PRKCSHP14314 528 aaPredicted RBP31.18■■■□□ 2.58
CAPN12-212ENST00000601953 FANCIQ9NVI1 1328 aa31.17■■■□□ 2.58
CAPN12-212ENST00000601953 PPP1R15AO75807 674 aaPredicted RBP31.16■■■□□ 2.58
CAPN12-212ENST00000601953 SYNJ2O15056 1496 aa31.15■■■□□ 2.58
CAPN12-212ENST00000601953 GCC2Q8IWJ2 1684 aa31.14■■■□□ 2.58
CAPN12-212ENST00000601953 NUP153P49790 1475 aaKnown RBP31.13■■■□□ 2.57
CAPN12-212ENST00000601953 MYT1LQ9UL68 1186 aa31.13■■■□□ 2.57
CAPN12-212ENST00000601953 RAPGEF6Q8TEU7 1601 aa31.12■■■□□ 2.57
CAPN12-212ENST00000601953 CEP170Q5SW79 1584 aa31.09■■■□□ 2.57
CAPN12-212ENST00000601953 CHMP7Q8WUX9 453 aaPredicted RBP31.06■■■□□ 2.56
CAPN12-212ENST00000601953 TONSLQ96HA7 1378 aa31.05■■■□□ 2.56
CAPN12-212ENST00000601953 ARID3CA6NKF2 412 aa31.04■■■□□ 2.56
CAPN12-212ENST00000601953 RRP7BPQ9NSQ0 103 aa31.02■■■□□ 2.56
CAPN12-212ENST00000601953 NUP160Q12769 1436 aa31.02■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms