RNA–Protein interactions for RNA: ENST00000601372.5

ZNF558-207, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF558, Length 7,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-207ENST00000601372 CARMIL1Q5VZK9 1371 aa15.51■□□□□ 0.07
ZNF558-207ENST00000601372 SENP3Q9H4L4 574 aaPredicted RBP15.47■□□□□ 0.07
ZNF558-207ENST00000601372 CEP162Q5TB80 1403 aa15.46■□□□□ 0.07
ZNF558-207ENST00000601372 ANP32CO43423 234 aa15.46■□□□□ 0.07
ZNF558-207ENST00000601372 MIER1Q8N108 512 aa15.4■□□□□ 0.06
ZNF558-207ENST00000601372 CFDP1Q9UEE9 299 aaPredicted RBP15.39■□□□□ 0.05
ZNF558-207ENST00000601372 CARMIL2Q6F5E8 1435 aa15.39■□□□□ 0.05
ZNF558-207ENST00000601372 SLC24A1O60721 1099 aa15.38■□□□□ 0.05
ZNF558-207ENST00000601372 RRP7BPQ9NSQ0 103 aa15.36■□□□□ 0.05
ZNF558-207ENST00000601372 OSCARQ8IYS5 282 aa15.35■□□□□ 0.05
ZNF558-207ENST00000601372 PPP1R15AO75807 674 aaPredicted RBP15.33■□□□□ 0.05
ZNF558-207ENST00000601372 MLECQ14165 292 aa15.33■□□□□ 0.05
ZNF558-207ENST00000601372 NCAPD3P42695 1498 aa15.33■□□□□ 0.04
ZNF558-207ENST00000601372 CYB5RLQ6IPT4 315 aa15.32■□□□□ 0.04
ZNF558-207ENST00000601372 DDX10Q13206 875 aaKnown RBP15.31■□□□□ 0.04
ZNF558-207ENST00000601372 DNAJC5BQ9UF47 199 aa15.31■□□□□ 0.04
ZNF558-207ENST00000601372 UNC13AQ9UPW8 1703 aa15.3■□□□□ 0.04
ZNF558-207ENST00000601372 HIRIP3Q9BW71 556 aaPredicted RBP15.29■□□□□ 0.04
ZNF558-207ENST00000601372 C14orf37Q86TY3 774 aa15.29■□□□□ 0.04
ZNF558-207ENST00000601372 KDM2AQ9Y2K7 1162 aa15.29■□□□□ 0.04
ZNF558-207ENST00000601372 NESP48681 1621 aa15.29■□□□□ 0.04
ZNF558-207ENST00000601372 FKBP8Q14318 412 aa15.27■□□□□ 0.03
ZNF558-207ENST00000601372 DAXXQ9UER7 740 aaPredicted RBP15.26■□□□□ 0.03
ZNF558-207ENST00000601372 TNIKQ9UKE5 1360 aa15.25■□□□□ 0.03
ZNF558-207ENST00000601372 CCNB3Q8WWL7 1395 aa15.25■□□□□ 0.03
ZNF558-207ENST00000601372 TONSLQ96HA7 1378 aa15.24■□□□□ 0.03
ZNF558-207ENST00000601372 PLEKHG5O94827 1062 aa15.24■□□□□ 0.03
ZNF558-207ENST00000601372 JPH4Q96JJ6 628 aa15.23■□□□□ 0.03
ZNF558-207ENST00000601372 FHAD1B1AJZ9 1412 aa15.23■□□□□ 0.03
ZNF558-207ENST00000601372 BICRAQ9NZM4 1560 aa15.23■□□□□ 0.03
ZNF558-207ENST00000601372 RAD54L2Q9Y4B4 1467 aa15.22■□□□□ 0.03
ZNF558-207ENST00000601372 FGD5Q6ZNL6 1462 aa15.21■□□□□ 0.03
ZNF558-207ENST00000601372 NEFMP07197 916 aa15.19■□□□□ 0.02
ZNF558-207ENST00000601372 MRC2Q9UBG0 1479 aa15.18■□□□□ 0.02
ZNF558-207ENST00000601372 RAPGEF2Q9Y4G8 1499 aa15.18■□□□□ 0.02
ZNF558-207ENST00000601372 GAPVD1Q14C86 1478 aa15.18■□□□□ 0.02
ZNF558-207ENST00000601372 AQRO60306 1485 aaKnown RBP eCLIP15.17■□□□□ 0.022e-9■■■■■ 44.8
ZNF558-207ENST00000601372 RGL3Q3MIN7 710 aa15.15■□□□□ 0.02
ZNF558-207ENST00000601372 ZBTB7CA1YPR0 619 aa15.14■□□□□ 0.01
ZNF558-207ENST00000601372 HMGXB3Q12766 1538 aa15.13■□□□□ 0.01
ZNF558-207ENST00000601372 HNRNPUQ00839 825 aaKnown RBP eCLIP15.12■□□□□ 0.01
ZNF558-207ENST00000601372 FAM9BQ8IZU0 186 aa15.12■□□□□ 0.01
ZNF558-207ENST00000601372 GGT6Q6P531 493 aa15.11■□□□□ 0.01
ZNF558-207ENST00000601372 CLSPNQ9HAW4 1339 aa15.09■□□□□ 0.01
ZNF558-207ENST00000601372 IRX6P78412 446 aaPredicted RBP15.09■□□□□ 0.01
ZNF558-207ENST00000601372 RTL5Q5HYW3 569 aaPredicted RBP15.09■□□□□ 0.01
ZNF558-207ENST00000601372 KANK1Q14678 1352 aa15.08■□□□□ 0.01
ZNF558-207ENST00000601372 A0A0G2JS52 829 aa15.08■□□□□ 0
ZNF558-207ENST00000601372 FHOD3Q2V2M9 1422 aa15.08■□□□□ 0
ZNF558-207ENST00000601372 HAP1P54257 671 aaPredicted RBP15.07■□□□□ 0
ZNF558-207ENST00000601372 FMN1Q68DA7 1419 aa15.07■□□□□ 0
ZNF558-207ENST00000601372 PRDM2Q13029 1718 aa15.07■□□□□ 0
ZNF558-207ENST00000601372 PTPRGP23470 1445 aa15.06■□□□□ 0
ZNF558-207ENST00000601372 EFCAB2Q5VUJ9 269 aa15.06■□□□□ 0
ZNF558-207ENST00000601372 CFTRP13569 1480 aa15.04■□□□□ -0
ZNF558-207ENST00000601372 AEBP2Q6ZN18 517 aaPredicted RBP15.03■□□□□ -0
ZNF558-207ENST00000601372 SIN3AQ96ST3 1273 aa15.03■□□□□ -0
ZNF558-207ENST00000601372 ARHGAP35Q9NRY4 1499 aa15.02□□□□□ -0.01
ZNF558-207ENST00000601372 IFT140Q96RY7 1462 aa15.01□□□□□ -0.01
ZNF558-207ENST00000601372 FAM69CQ0P6D2 419 aa15.01□□□□□ -0.01
ZNF558-207ENST00000601372 SALL2Q9Y467 1007 aaPredicted RBP15.01□□□□□ -0.01
ZNF558-207ENST00000601372 RUSC2Q8N2Y8 1516 aa15□□□□□ -0.01
ZNF558-207ENST00000601372 GRIN2BQ13224 1484 aa15□□□□□ -0.01
ZNF558-207ENST00000601372 LAMC3Q9Y6N6 1575 aa15□□□□□ -0.01
ZNF558-207ENST00000601372 NPM2Q86SE8 214 aaKnown RBP14.99□□□□□ -0.01
ZNF558-207ENST00000601372 HNRNPMP52272 730 aaKnown RBP eCLIP14.99□□□□□ -0.01
ZNF558-207ENST00000601372 KANK4Q5T7N3 995 aaPredicted RBP14.98□□□□□ -0.01
ZNF558-207ENST00000601372 SENP3-EIF4A1A0A087X0R7 540 aa14.98□□□□□ -0.01
ZNF558-207ENST00000601372 BCL11AQ9H165 835 aa14.98□□□□□ -0.01
ZNF558-207ENST00000601372 TMC1Q8TDI8 760 aa14.97□□□□□ -0.01
ZNF558-207ENST00000601372 TOPBP1Q92547 1522 aa14.97□□□□□ -0.01
ZNF558-207ENST00000601372 LMOD2Q6P5Q4 547 aa14.96□□□□□ -0.01
ZNF558-207ENST00000601372 CANXP27824 592 aaKnown RBP14.95□□□□□ -0.02
ZNF558-207ENST00000601372 HDGFP51858 240 aaKnown RBP14.95□□□□□ -0.02
ZNF558-207ENST00000601372 POGKQ9P215 609 aa14.95□□□□□ -0.02
ZNF558-207ENST00000601372 SNAPC4Q5SXM2 1469 aa14.93□□□□□ -0.02
ZNF558-207ENST00000601372 CCDC18Q5T9S5 1454 aa14.92□□□□□ -0.02
ZNF558-207ENST00000601372 VPS8Q8N3P4 1428 aa14.92□□□□□ -0.02
ZNF558-207ENST00000601372 MRS2Q9HD23 443 aa14.91□□□□□ -0.02
ZNF558-207ENST00000601372 SPAG9O60271 1321 aaKnown RBP14.91□□□□□ -0.02
ZNF558-207ENST00000601372 IGF1RP08069 1367 aa14.91□□□□□ -0.02
ZNF558-207ENST00000601372 DNMBPQ6XZF7 1577 aa14.91□□□□□ -0.02
ZNF558-207ENST00000601372 KIF3BO15066 747 aa14.91□□□□□ -0.02
ZNF558-207ENST00000601372 ZBTB47Q9UFB7 747 aaPredicted RBP14.89□□□□□ -0.03
ZNF558-207ENST00000601372 POLA1P09884 1462 aaPredicted RBP14.87□□□□□ -0.03
ZNF558-207ENST00000601372 ANP32AP39687 249 aaKnown RBP14.87□□□□□ -0.03
ZNF558-207ENST00000601372 PRG4Q92954 1404 aaPredicted RBP14.87□□□□□ -0.03
ZNF558-207ENST00000601372 SYNJ1O43426 1573 aa14.87□□□□□ -0.03
ZNF558-207ENST00000601372 SUPT16HQ9Y5B9 1047 aaKnown RBP14.86□□□□□ -0.03
ZNF558-207ENST00000601372 CUX1P39880 1505 aa14.86□□□□□ -0.03
ZNF558-207ENST00000601372 WASHC2CQ9Y4E1 1318 aa14.85□□□□□ -0.03
ZNF558-207ENST00000601372 EIF4G2P78344 907 aaKnown RBP eCLIP14.85□□□□□ -0.03
ZNF558-207ENST00000601372 ANKRD30AQ9BXX3 1397 aa14.83□□□□□ -0.04
ZNF558-207ENST00000601372 CARD11Q9BXL7 1154 aa14.83□□□□□ -0.04
ZNF558-207ENST00000601372 STK26Q9P289 416 aa14.82□□□□□ -0.04
ZNF558-207ENST00000601372 SAFB2Q14151 953 aaKnown RBP eCLIP14.82□□□□□ -0.04
ZNF558-207ENST00000601372 NBR1Q14596 966 aa14.81□□□□□ -0.04
ZNF558-207ENST00000601372 DCAF11Q8TEB1 546 aa14.81□□□□□ -0.04
ZNF558-207ENST00000601372 PPM1GO15355 546 aaPredicted RBP14.8□□□□□ -0.04
ZNF558-207ENST00000601372 TOP2BQ02880 1626 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms