RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 FBLN2P98095 1184 aa36.04■■■■□ 3.36
IRF3-228ENST00000601291 RANGAP1P46060 587 aaPredicted RBP35.96■■■■□ 3.35
IRF3-228ENST00000601291 CHD1O14646 1710 aa35.92■■■■□ 3.34
IRF3-228ENST00000601291 IQGAP2Q13576 1575 aa35.9■■■■□ 3.34
IRF3-228ENST00000601291 NUP160Q12769 1436 aa35.9■■■■□ 3.34
IRF3-228ENST00000601291 CEP170Q5SW79 1584 aa35.89■■■■□ 3.34
IRF3-228ENST00000601291 KIAA0586Q9BVV6 1533 aa35.88■■■■□ 3.34
IRF3-228ENST00000601291 EFCAB5A4FU69 1503 aa35.82■■■■□ 3.32
IRF3-228ENST00000601291 ARHGAP35Q9NRY4 1499 aa35.81■■■■□ 3.32
IRF3-228ENST00000601291 ARAP1Q96P48 1450 aa35.72■■■■□ 3.31
IRF3-228ENST00000601291 SAMD9Q5K651 1589 aa35.71■■■■□ 3.31
IRF3-228ENST00000601291 UGGT2Q9NYU1 1516 aa35.71■■■■□ 3.31
IRF3-228ENST00000601291 VPS8Q8N3P4 1428 aa35.67■■■■□ 3.3
IRF3-228ENST00000601291 P3H3Q8IVL6 736 aa35.58■■■■□ 3.29
IRF3-228ENST00000601291 FHOD3Q2V2M9 1422 aa35.58■■■■□ 3.29
IRF3-228ENST00000601291 JPH4Q96JJ6 628 aa35.55■■■■□ 3.28
IRF3-228ENST00000601291 CLASP1Q7Z460 1538 aa35.54■■■■□ 3.28
IRF3-228ENST00000601291 KIAA0556O60303 1618 aa35.53■■■■□ 3.28
IRF3-228ENST00000601291 DISP1Q96F81 1524 aa35.52■■■■□ 3.28
IRF3-228ENST00000601291 CARMIL2Q6F5E8 1435 aa35.5■■■■□ 3.27
IRF3-228ENST00000601291 FMN1Q68DA7 1419 aa35.48■■■■□ 3.27
IRF3-228ENST00000601291 SHROOM2Q13796 1616 aa35.47■■■■□ 3.27
IRF3-228ENST00000601291 OSCARQ8IYS5 282 aa35.41■■■■□ 3.26
IRF3-228ENST00000601291 PRG4Q92954 1404 aaPredicted RBP35.4■■■■□ 3.26
IRF3-228ENST00000601291 PCF11O94913 1555 aaKnown RBP35.34■■■■□ 3.25
IRF3-228ENST00000601291 APLP2Q06481 763 aa35.32■■■■□ 3.24
IRF3-228ENST00000601291 FYCO1Q9BQS8 1478 aa35.32■■■■□ 3.24
IRF3-228ENST00000601291 CASKIN1Q8WXD9 1431 aa35.31■■■■□ 3.24
IRF3-228ENST00000601291 TTBK1Q5TCY1 1321 aaPredicted RBP35.19■■■■□ 3.22
IRF3-228ENST00000601291 ATP1B4Q9UN42 357 aaPredicted RBP35.18■■■■□ 3.22
IRF3-228ENST00000601291 ERCC6L2Q5T890 1561 aa35.17■■■■□ 3.22
IRF3-228ENST00000601291 HECW1Q76N89 1606 aa35.17■■■■□ 3.22
IRF3-228ENST00000601291 MAP3K1Q13233 1512 aa35.15■■■■□ 3.22
IRF3-228ENST00000601291 PTPRGP23470 1445 aa35.14■■■■□ 3.22
IRF3-228ENST00000601291 RAPGEF6Q8TEU7 1601 aa35.12■■■■□ 3.21
IRF3-228ENST00000601291 TIAM1Q13009 1591 aa35.11■■■■□ 3.21
IRF3-228ENST00000601291 CFAP43Q8NDM7 1665 aa35.09■■■■□ 3.21
IRF3-228ENST00000601291 PPARGC1BQ86YN6 1023 aaKnown RBP35.08■■■■□ 3.21
IRF3-228ENST00000601291 CCDC18Q5T9S5 1454 aa35.06■■■■□ 3.2
IRF3-228ENST00000601291 PLB1Q6P1J6 1458 aa35.06■■■■□ 3.2
IRF3-228ENST00000601291 ABCA8O94911 1581 aa35.03■■■■□ 3.2
IRF3-228ENST00000601291 LRRIQ1Q96JM4 1722 aa35■■■■□ 3.19
IRF3-228ENST00000601291 NUP153P49790 1475 aaKnown RBP34.99■■■■□ 3.19
IRF3-228ENST00000601291 EPRSP07814 1512 aaKnown RBP34.99■■■■□ 3.19
IRF3-228ENST00000601291 UACAQ9BZF9 1416 aa34.94■■■■□ 3.18
IRF3-228ENST00000601291 KANK4Q5T7N3 995 aaPredicted RBP34.94■■■■□ 3.18
IRF3-228ENST00000601291 LRRC9Q6ZRR7 1453 aa34.94■■■■□ 3.18
IRF3-228ENST00000601291 CDK13Q14004 1512 aaKnown RBP34.9■■■■□ 3.18
IRF3-228ENST00000601291 ABCC2Q92887 1545 aa34.86■■■■□ 3.17
IRF3-228ENST00000601291 ARID3CA6NKF2 412 aa34.84■■■■□ 3.17
IRF3-228ENST00000601291 MTUS2Q5JR59 1369 aa34.84■■■■□ 3.17
IRF3-228ENST00000601291 ARHGEF11O15085 1522 aa34.84■■■■□ 3.17
IRF3-228ENST00000601291 UHRF1BP1LA0JNW5 1464 aa34.82■■■■□ 3.16
IRF3-228ENST00000601291 EHBP1L1Q8N3D4 1523 aa34.82■■■■□ 3.16
IRF3-228ENST00000601291 TRIM26Q12899 539 aaPredicted RBP34.81■■■■□ 3.16
IRF3-228ENST00000601291 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.8■■■■□ 3.16
IRF3-228ENST00000601291 HNRNPUL2Q1KMD3 747 aaKnown RBP34.8■■■■□ 3.16
IRF3-228ENST00000601291 CDK11AQ9UQ88 783 aaPredicted RBP34.78■■■■□ 3.16
IRF3-228ENST00000601291 ATP10BO94823 1461 aa34.76■■■■□ 3.15
IRF3-228ENST00000601291 MAGI3Q5TCQ9 1506 aa34.73■■■■□ 3.15
IRF3-228ENST00000601291 RIMBP3CA6NJZ7 1639 aa34.69■■■■□ 3.14
IRF3-228ENST00000601291 RIMBP3BA6NNM3 1639 aa34.69■■■■□ 3.14
IRF3-228ENST00000601291 RIMBP3Q9UFD9 1639 aa34.69■■■■□ 3.14
IRF3-228ENST00000601291 SUPT6HQ7KZ85 1726 aaKnown RBP34.68■■■■□ 3.14
IRF3-228ENST00000601291 ADCY10Q96PN6 1610 aa34.67■■■■□ 3.14
IRF3-228ENST00000601291 KDM5BQ9UGL1 1544 aa34.65■■■■□ 3.14
IRF3-228ENST00000601291 TROQ12816 1431 aaPredicted RBP34.64■■■■□ 3.14
IRF3-228ENST00000601291 ZCCHC11Q5TAX3 1644 aaKnown RBP34.61■■■■□ 3.13
IRF3-228ENST00000601291 PLEKHD1A6NEE1 506 aa34.61■■■■□ 3.13
IRF3-228ENST00000601291 NCOA2Q15596 1464 aa34.6■■■■□ 3.13
IRF3-228ENST00000601291 PCGF6Q9BYE7 350 aa34.59■■■■□ 3.13
IRF3-228ENST00000601291 PHLDB1Q86UU1 1377 aa34.55■■■■□ 3.12
IRF3-228ENST00000601291 RRBP1Q9P2E9 1410 aaKnown RBP34.5■■■■□ 3.11
IRF3-228ENST00000601291 KIF14Q15058 1648 aa34.5■■■■□ 3.11
IRF3-228ENST00000601291 NPM1P06748 294 aaKnown RBP eCLIP34.46■■■■□ 3.11
IRF3-228ENST00000601291 CYB5RLQ6IPT4 315 aa34.45■■■■□ 3.11
IRF3-228ENST00000601291 MYOM3Q5VTT5 1437 aa34.45■■■■□ 3.11
IRF3-228ENST00000601291 CCNB3Q8WWL7 1395 aa34.43■■■■□ 3.1
IRF3-228ENST00000601291 FGD6Q6ZV73 1430 aa34.39■■■■□ 3.1
IRF3-228ENST00000601291 WDR7Q9Y4E6 1490 aa34.36■■■■□ 3.09
IRF3-228ENST00000601291 ABCC10Q5T3U5 1492 aa34.33■■■■□ 3.09
IRF3-228ENST00000601291 ITSN2Q9NZM3 1697 aa34.33■■■■□ 3.09
IRF3-228ENST00000601291 ASXL2Q76L83 1435 aa34.32■■■■□ 3.08
IRF3-228ENST00000601291 MIA2Q96PC5 1412 aa34.32■■■■□ 3.08
IRF3-228ENST00000601291 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.27■■■■□ 3.083e-6■□□□□ 11.3
IRF3-228ENST00000601291 GPATCH8Q9UKJ3 1502 aaKnown RBP34.26■■■■□ 3.08
IRF3-228ENST00000601291 FAM50AQ14320 339 aaKnown RBP34.26■■■■□ 3.07
IRF3-228ENST00000601291 KCNH8Q96L42 1107 aa34.26■■■■□ 3.07
IRF3-228ENST00000601291 PTPN23Q9H3S7 1636 aa34.25■■■■□ 3.07
IRF3-228ENST00000601291 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.25■■■■□ 3.073e-7■□□□□ 11.1
IRF3-228ENST00000601291 TTC37Q6PGP7 1564 aa34.22■■■■□ 3.07
IRF3-228ENST00000601291 TCOF1Q13428 1488 aaKnown RBP34.22■■■■□ 3.07
IRF3-228ENST00000601291 CDC42BPAQ5VT25 1732 aa34.21■■■■□ 3.07
IRF3-228ENST00000601291 MAPKBP1O60336 1514 aa34.21■■■■□ 3.07
IRF3-228ENST00000601291 CFDP1Q9UEE9 299 aaPredicted RBP34.19■■■■□ 3.06
IRF3-228ENST00000601291 PREX2Q70Z35 1606 aa34.17■■■■□ 3.06
IRF3-228ENST00000601291 MYO5CQ9NQX4 1742 aa34.14■■■■□ 3.06
IRF3-228ENST00000601291 ABCA9Q8IUA7 1624 aa34.11■■■■□ 3.05
IRF3-228ENST00000601291 ITGAEP38570 1179 aa34.08■■■■□ 3.05
IRF3-228ENST00000601291 CAMSAP2Q08AD1 1489 aa34.08■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms