RNA–Protein interactions for RNA: ENST00000600358.7

STRN4-218, Transcript of striatin 4, humanhuman

TSL 5

Gene STRN4, Length 1,267 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN4-218ENST00000600358 CLASP1Q7Z460 1538 aa26.54■■□□□ 1.84
STRN4-218ENST00000600358 LOC105371045A0A1W2PR82 267 aa26.48■■□□□ 1.83
STRN4-218ENST00000600358 FBLN2P98095 1184 aa26.48■■□□□ 1.83
STRN4-218ENST00000600358 UBTFP17480 764 aaKnown RBP26.47■■□□□ 1.83
STRN4-218ENST00000600358 SHROOM2Q13796 1616 aa26.47■■□□□ 1.83
STRN4-218ENST00000600358 UGGT2Q9NYU1 1516 aa26.44■■□□□ 1.82
STRN4-218ENST00000600358 EFCAB5A4FU69 1503 aa26.41■■□□□ 1.82
STRN4-218ENST00000600358 SAMD9Q5K651 1589 aa26.41■■□□□ 1.82
STRN4-218ENST00000600358 EHMT2Q96KQ7 1210 aa26.38■■□□□ 1.81
STRN4-218ENST00000600358 CEP162Q5TB80 1403 aa26.37■■□□□ 1.81
STRN4-218ENST00000600358 OSCARQ8IYS5 282 aa26.31■■□□□ 1.8
STRN4-218ENST00000600358 KIAA0556O60303 1618 aa26.31■■□□□ 1.8
STRN4-218ENST00000600358 CLIP1P30622 1438 aa26.3■■□□□ 1.8
STRN4-218ENST00000600358 ARHGAP35Q9NRY4 1499 aa26.28■■□□□ 1.8
STRN4-218ENST00000600358 DISP1Q96F81 1524 aa26.27■■□□□ 1.8
STRN4-218ENST00000600358 JPH4Q96JJ6 628 aa26.22■■□□□ 1.79
STRN4-218ENST00000600358 CARMIL2Q6F5E8 1435 aa26.2■■□□□ 1.78
STRN4-218ENST00000600358 ARAP1Q96P48 1450 aa26.18■■□□□ 1.78
STRN4-218ENST00000600358 PRG4Q92954 1404 aaPredicted RBP26.17■■□□□ 1.78
STRN4-218ENST00000600358 ERCC6L2Q5T890 1561 aa26.12■■□□□ 1.77
STRN4-218ENST00000600358 FHOD3Q2V2M9 1422 aa26.1■■□□□ 1.77
STRN4-218ENST00000600358 FMN1Q68DA7 1419 aa26.05■■□□□ 1.76
STRN4-218ENST00000600358 DNAJC5Q9H3Z4 198 aa26.05■■□□□ 1.76
STRN4-218ENST00000600358 VPS8Q8N3P4 1428 aa26.05■■□□□ 1.76
STRN4-218ENST00000600358 ARHGEF11O15085 1522 aa26.04■■□□□ 1.76
STRN4-218ENST00000600358 RANGAP1P46060 587 aaPredicted RBP26.02■■□□□ 1.76
STRN4-218ENST00000600358 RIMBP3CA6NJZ7 1639 aa25.99■■□□□ 1.75
STRN4-218ENST00000600358 RIMBP3BA6NNM3 1639 aa25.99■■□□□ 1.75
STRN4-218ENST00000600358 RIMBP3Q9UFD9 1639 aa25.99■■□□□ 1.75
STRN4-218ENST00000600358 PCF11O94913 1555 aaKnown RBP25.99■■□□□ 1.75
STRN4-218ENST00000600358 ABCA8O94911 1581 aa25.97■■□□□ 1.75
STRN4-218ENST00000600358 FYCO1Q9BQS8 1478 aa25.97■■□□□ 1.75
STRN4-218ENST00000600358 RAPGEF6Q8TEU7 1601 aa25.96■■□□□ 1.75
STRN4-218ENST00000600358 HECW1Q76N89 1606 aa25.94■■□□□ 1.74
STRN4-218ENST00000600358 P3H3Q8IVL6 736 aa25.93■■□□□ 1.74
STRN4-218ENST00000600358 PTPRGP23470 1445 aa25.93■■□□□ 1.74
STRN4-218ENST00000600358 CASKIN1Q8WXD9 1431 aa25.93■■□□□ 1.74
STRN4-218ENST00000600358 UHRF1BP1LA0JNW5 1464 aa25.87■■□□□ 1.73
STRN4-218ENST00000600358 LRRIQ1Q96JM4 1722 aa25.87■■□□□ 1.73
STRN4-218ENST00000600358 ABCC2Q92887 1545 aa25.87■■□□□ 1.73
STRN4-218ENST00000600358 CFAP43Q8NDM7 1665 aa25.86■■□□□ 1.73
STRN4-218ENST00000600358 PLB1Q6P1J6 1458 aa25.85■■□□□ 1.73
STRN4-218ENST00000600358 UACAQ9BZF9 1416 aa25.84■■□□□ 1.73
STRN4-218ENST00000600358 MAP3K1Q13233 1512 aa25.83■■□□□ 1.73
STRN4-218ENST00000600358 NUP153P49790 1475 aaKnown RBP25.81■■□□□ 1.72
STRN4-218ENST00000600358 CCDC18Q5T9S5 1454 aa25.81■■□□□ 1.72
STRN4-218ENST00000600358 ADCY10Q96PN6 1610 aa25.81■■□□□ 1.72
STRN4-218ENST00000600358 TIAM1Q13009 1591 aa25.77■■□□□ 1.72
STRN4-218ENST00000600358 EPRSP07814 1512 aaKnown RBP25.75■■□□□ 1.71
STRN4-218ENST00000600358 KDM5BQ9UGL1 1544 aa25.73■■□□□ 1.71
STRN4-218ENST00000600358 ZCCHC11Q5TAX3 1644 aaKnown RBP25.7■■□□□ 1.71
STRN4-218ENST00000600358 CDK13Q14004 1512 aaKnown RBP25.68■■□□□ 1.7
STRN4-218ENST00000600358 TTBK1Q5TCY1 1321 aaPredicted RBP25.66■■□□□ 1.7
STRN4-218ENST00000600358 ATP10BO94823 1461 aa25.65■■□□□ 1.7
STRN4-218ENST00000600358 EHBP1L1Q8N3D4 1523 aa25.61■■□□□ 1.69
STRN4-218ENST00000600358 LRRC9Q6ZRR7 1453 aa25.58■■□□□ 1.69
STRN4-218ENST00000600358 MAGI3Q5TCQ9 1506 aa25.57■■□□□ 1.68
STRN4-218ENST00000600358 APLP2Q06481 763 aa25.55■■□□□ 1.68
STRN4-218ENST00000600358 MAPKBP1O60336 1514 aa25.54■■□□□ 1.68
STRN4-218ENST00000600358 CYB5RLQ6IPT4 315 aa25.53■■□□□ 1.68
STRN4-218ENST00000600358 ATP1B4Q9UN42 357 aaPredicted RBP25.53■■□□□ 1.68
STRN4-218ENST00000600358 TROQ12816 1431 aaPredicted RBP25.51■■□□□ 1.67
STRN4-218ENST00000600358 SUPT6HQ7KZ85 1726 aaKnown RBP25.51■■□□□ 1.67
STRN4-218ENST00000600358 CDK11AQ9UQ88 783 aaPredicted RBP25.48■■□□□ 1.67
STRN4-218ENST00000600358 KIF14Q15058 1648 aa25.47■■□□□ 1.67
STRN4-218ENST00000600358 MTUS2Q5JR59 1369 aa25.46■■□□□ 1.67
STRN4-218ENST00000600358 WDR7Q9Y4E6 1490 aa25.46■■□□□ 1.67
STRN4-218ENST00000600358 ASXL2Q76L83 1435 aa25.42■■□□□ 1.66
STRN4-218ENST00000600358 NPM1P06748 294 aaKnown RBP eCLIP25.41■■□□□ 1.66
STRN4-218ENST00000600358 KANK4Q5T7N3 995 aaPredicted RBP25.41■■□□□ 1.66
STRN4-218ENST00000600358 ARID3CA6NKF2 412 aa25.4■■□□□ 1.66
STRN4-218ENST00000600358 PLEKHD1A6NEE1 506 aa25.38■■□□□ 1.65
STRN4-218ENST00000600358 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.38■■□□□ 1.65
STRN4-218ENST00000600358 HNRNPUL2Q1KMD3 747 aaKnown RBP25.38■■□□□ 1.65
STRN4-218ENST00000600358 NCOA2Q15596 1464 aa25.37■■□□□ 1.65
STRN4-218ENST00000600358 ITSN2Q9NZM3 1697 aa25.36■■□□□ 1.65
STRN4-218ENST00000600358 ABCA9Q8IUA7 1624 aa25.35■■□□□ 1.65
STRN4-218ENST00000600358 ABCC10Q5T3U5 1492 aa25.34■■□□□ 1.65
STRN4-218ENST00000600358 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.32■■□□□ 1.64
STRN4-218ENST00000600358 GLI2P10070 1586 aa25.32■■□□□ 1.64
STRN4-218ENST00000600358 TTC37Q6PGP7 1564 aa25.32■■□□□ 1.64
STRN4-218ENST00000600358 CDC42BPAQ5VT25 1732 aa25.32■■□□□ 1.64
STRN4-218ENST00000600358 MYO5CQ9NQX4 1742 aa25.31■■□□□ 1.64
STRN4-218ENST00000600358 DIP2BQ9P265 1576 aa25.31■■□□□ 1.64
STRN4-218ENST00000600358 PREX2Q70Z35 1606 aa25.3■■□□□ 1.64
STRN4-218ENST00000600358 ARAP3Q8WWN8 1544 aa25.27■■□□□ 1.64
STRN4-218ENST00000600358 KIF13AQ9H1H9 1805 aa25.25■■□□□ 1.63
STRN4-218ENST00000600358 MAP3K4Q9Y6R4 1608 aa25.24■■□□□ 1.63
STRN4-218ENST00000600358 MYOM3Q5VTT5 1437 aa25.24■■□□□ 1.63
STRN4-218ENST00000600358 CDC42BPBQ9Y5S2 1711 aa25.23■■□□□ 1.63
STRN4-218ENST00000600358 PHLDB1Q86UU1 1377 aa25.23■■□□□ 1.63
STRN4-218ENST00000600358 GPATCH8Q9UKJ3 1502 aaKnown RBP25.21■■□□□ 1.63
STRN4-218ENST00000600358 MIA2Q96PC5 1412 aa25.2■■□□□ 1.62
STRN4-218ENST00000600358 RRBP1Q9P2E9 1410 aaKnown RBP25.19■■□□□ 1.62
STRN4-218ENST00000600358 CCNB3Q8WWL7 1395 aa25.18■■□□□ 1.62
STRN4-218ENST00000600358 PPARGC1BQ86YN6 1023 aaKnown RBP25.18■■□□□ 1.62
STRN4-218ENST00000600358 FGD6Q6ZV73 1430 aa25.17■■□□□ 1.62
STRN4-218ENST00000600358 CFAP74Q9C0B2 1584 aa25.16■■□□□ 1.62
STRN4-218ENST00000600358 PTPN23Q9H3S7 1636 aa25.15■■□□□ 1.62
STRN4-218ENST00000600358 TCOF1Q13428 1488 aaKnown RBP25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms