RNA–Protein interactions for RNA: ENST00000600297.1

SLC27A1-209, Transcript of solute carrier family 27 member 1, humanhuman

TSL 2

Gene SLC27A1, Length 1,163 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1-209ENST00000600297 PRG4Q92954 1404 aaPredicted RBP39.27■■■■□ 3.88
SLC27A1-209ENST00000600297 CARMIL1Q5VZK9 1371 aa39.22■■■■□ 3.87
SLC27A1-209ENST00000600297 JPH4Q96JJ6 628 aa39.22■■■■□ 3.87
SLC27A1-209ENST00000600297 KIAA0586Q9BVV6 1533 aa39.14■■■■□ 3.86
SLC27A1-209ENST00000600297 RAPGEF2Q9Y4G8 1499 aa39■■■■□ 3.83
SLC27A1-209ENST00000600297 CHIC1Q5VXU3 224 aa38.95■■■■□ 3.83
SLC27A1-209ENST00000600297 IQGAP2Q13576 1575 aa38.91■■■■□ 3.82
SLC27A1-209ENST00000600297 EEA1Q15075 1411 aa38.89■■■■□ 3.82
SLC27A1-209ENST00000600297 PRXQ9BXM0 1461 aa38.85■■■■□ 3.81
SLC27A1-209ENST00000600297 KIF13AQ9H1H9 1805 aa38.84■■■■□ 3.81
SLC27A1-209ENST00000600297 ADCY10Q96PN6 1610 aa38.84■■■■□ 3.81
SLC27A1-209ENST00000600297 CSRNP3Q8WYN3 585 aa38.81■■■■□ 3.8
SLC27A1-209ENST00000600297 CARMIL2Q6F5E8 1435 aa38.78■■■■□ 3.8
SLC27A1-209ENST00000600297 NPM1P06748 294 aaKnown RBP eCLIP38.77■■■■□ 3.8
SLC27A1-209ENST00000600297 CTTNBP2Q8WZ74 1663 aa38.7■■■■□ 3.79
SLC27A1-209ENST00000600297 PTPRGP23470 1445 aa38.7■■■■□ 3.79
SLC27A1-209ENST00000600297 MAPKBP1O60336 1514 aa38.69■■■■□ 3.78
SLC27A1-209ENST00000600297 TTBK1Q5TCY1 1321 aaPredicted RBP38.66■■■■□ 3.78
SLC27A1-209ENST00000600297 TNIKQ9UKE5 1360 aa38.66■■■■□ 3.78
SLC27A1-209ENST00000600297 UGGT2Q9NYU1 1516 aa38.6■■■■□ 3.77
SLC27A1-209ENST00000600297 DISP1Q96F81 1524 aa38.59■■■■□ 3.77
SLC27A1-209ENST00000600297 ABCC10Q5T3U5 1492 aa38.58■■■■□ 3.77
SLC27A1-209ENST00000600297 DIP2BQ9P265 1576 aa38.57■■■■□ 3.76
SLC27A1-209ENST00000600297 FAM9AQ8IZU1 332 aaPredicted RBP38.55■■■■□ 3.76
SLC27A1-209ENST00000600297 KIAA0556O60303 1618 aa38.54■■■■□ 3.76
SLC27A1-209ENST00000600297 FAM69CQ0P6D2 419 aa38.51■■■■□ 3.76
SLC27A1-209ENST00000600297 ABCC2Q92887 1545 aa38.48■■■■□ 3.75
SLC27A1-209ENST00000600297 KIF21BO75037 1637 aa38.45■■■■□ 3.75
SLC27A1-209ENST00000600297 TSPOAP1O95153 1857 aa38.43■■■■□ 3.74
SLC27A1-209ENST00000600297 UHRF1BP1LA0JNW5 1464 aa38.42■■■■□ 3.74
SLC27A1-209ENST00000600297 UACAQ9BZF9 1416 aa38.42■■■■□ 3.74
SLC27A1-209ENST00000600297 GOLGA3Q08378 1498 aa38.39■■■■□ 3.74
SLC27A1-209ENST00000600297 ASXL2Q76L83 1435 aa38.29■■■■□ 3.72
SLC27A1-209ENST00000600297 PLB1Q6P1J6 1458 aa38.28■■■■□ 3.72
SLC27A1-209ENST00000600297 ZCCHC11Q5TAX3 1644 aaKnown RBP38.28■■■■□ 3.72
SLC27A1-209ENST00000600297 KDM5BQ9UGL1 1544 aa38.25■■■■□ 3.71
SLC27A1-209ENST00000600297 KDM6BO15054 1643 aa38.19■■■■□ 3.7
SLC27A1-209ENST00000600297 GLI2P10070 1586 aa38.18■■■■□ 3.7
SLC27A1-209ENST00000600297 SAMD9Q5K651 1589 aa38.14■■■■□ 3.7
SLC27A1-209ENST00000600297 ABCA8O94911 1581 aa38.12■■■■□ 3.69
SLC27A1-209ENST00000600297 UBTFP17480 764 aaKnown RBP38.1■■■■□ 3.69
SLC27A1-209ENST00000600297 PPRC1Q5VV67 1664 aaKnown RBP38.09■■■■□ 3.69
SLC27A1-209ENST00000600297 EPRSP07814 1512 aaKnown RBP38.07■■■■□ 3.68
SLC27A1-209ENST00000600297 AEBP2Q6ZN18 517 aaPredicted RBP38.05■■■■□ 3.68
SLC27A1-209ENST00000600297 MAP3K4Q9Y6R4 1608 aa38.03■■■■□ 3.68
SLC27A1-209ENST00000600297 P3H3Q8IVL6 736 aa38■■■■□ 3.67
SLC27A1-209ENST00000600297 WDR7Q9Y4E6 1490 aa38■■■■□ 3.67
SLC27A1-209ENST00000600297 EFCAB5A4FU69 1503 aa37.99■■■■□ 3.67
SLC27A1-209ENST00000600297 EHMT2Q96KQ7 1210 aa37.99■■■■□ 3.67
SLC27A1-209ENST00000600297 RANGAP1P46060 587 aaPredicted RBP37.94■■■■□ 3.66
SLC27A1-209ENST00000600297 TEX14Q8IWB6 1497 aa37.88■■■■□ 3.65
SLC27A1-209ENST00000600297 CFAP43Q8NDM7 1665 aa37.86■■■■□ 3.65
SLC27A1-209ENST00000600297 RAPGEF6Q8TEU7 1601 aa37.86■■■■□ 3.65
SLC27A1-209ENST00000600297 FHOD3Q2V2M9 1422 aa37.84■■■■□ 3.65
SLC27A1-209ENST00000600297 ARID3CA6NKF2 412 aa37.79■■■■□ 3.64
SLC27A1-209ENST00000600297 KCNH8Q96L42 1107 aa37.78■■■■□ 3.64
SLC27A1-209ENST00000600297 ATP10BO94823 1461 aa37.75■■■■□ 3.63
SLC27A1-209ENST00000600297 ARHGAP35Q9NRY4 1499 aa37.73■■■■□ 3.63
SLC27A1-209ENST00000600297 CD109Q6YHK3 1445 aa37.7■■■■□ 3.63
SLC27A1-209ENST00000600297 MAGI3Q5TCQ9 1506 aa37.66■■■■□ 3.62
SLC27A1-209ENST00000600297 COL17A1Q9UMD9 1497 aaPredicted RBP37.65■■■■□ 3.62
SLC27A1-209ENST00000600297 FMN1Q68DA7 1419 aa37.64■■■■□ 3.62
SLC27A1-209ENST00000600297 NUP153P49790 1475 aaKnown RBP37.61■■■■□ 3.61
SLC27A1-209ENST00000600297 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.61■■■■□ 3.61
SLC27A1-209ENST00000600297 HNRNPUL2Q1KMD3 747 aaKnown RBP37.61■■■■□ 3.61
SLC27A1-209ENST00000600297 ABCA9Q8IUA7 1624 aa37.58■■■■□ 3.61
SLC27A1-209ENST00000600297 CLIP1P30622 1438 aa37.5■■■■□ 3.59
SLC27A1-209ENST00000600297 KDM4FA0A1W2PPD8 638 aa37.45■■■■□ 3.59
SLC27A1-209ENST00000600297 HECW1Q76N89 1606 aa37.45■■■■□ 3.59
SLC27A1-209ENST00000600297 PLEKHD1A6NEE1 506 aa37.37■■■■□ 3.57
SLC27A1-209ENST00000600297 ADGRL1O94910 1474 aa37.37■■■■□ 3.57
SLC27A1-209ENST00000600297 ARAP3Q8WWN8 1544 aa37.36■■■■□ 3.57
SLC27A1-209ENST00000600297 ATP1B4Q9UN42 357 aaPredicted RBP37.34■■■■□ 3.57
SLC27A1-209ENST00000600297 CDK13Q14004 1512 aaKnown RBP37.33■■■■□ 3.57
SLC27A1-209ENST00000600297 CEP162Q5TB80 1403 aa37.31■■■■□ 3.56
SLC27A1-209ENST00000600297 CASKIN1Q8WXD9 1431 aa37.31■■■■□ 3.56
SLC27A1-209ENST00000600297 PHLDB1Q86UU1 1377 aa37.3■■■■□ 3.56
SLC27A1-209ENST00000600297 LOC105371045A0A1W2PR82 267 aa37.3■■■■□ 3.56
SLC27A1-209ENST00000600297 NEO1Q92859 1461 aa37.3■■■■□ 3.56
SLC27A1-209ENST00000600297 PCF11O94913 1555 aaKnown RBP37.25■■■■□ 3.55
SLC27A1-209ENST00000600297 CDK11AQ9UQ88 783 aaPredicted RBP37.25■■■■□ 3.55
SLC27A1-209ENST00000600297 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.24■■■■□ 3.55
SLC27A1-209ENST00000600297 TTC37Q6PGP7 1564 aa37.23■■■■□ 3.55
SLC27A1-209ENST00000600297 FYCO1Q9BQS8 1478 aa37.23■■■■□ 3.55
SLC27A1-209ENST00000600297 CFAP74Q9C0B2 1584 aa37.22■■■■□ 3.55
SLC27A1-209ENST00000600297 LRRIQ1Q96JM4 1722 aa37.21■■■■□ 3.55
SLC27A1-209ENST00000600297 CCDC18Q5T9S5 1454 aa37.2■■■■□ 3.54
SLC27A1-209ENST00000600297 FRMPD1Q5SYB0 1578 aa37.12■■■■□ 3.53
SLC27A1-209ENST00000600297 FANCAO15360 1455 aa37.11■■■■□ 3.53
SLC27A1-209ENST00000600297 RAPGEF3O95398 923 aa37.1■■■■□ 3.53
SLC27A1-209ENST00000600297 RICTORQ6R327 1708 aa37.08■■■■□ 3.53
SLC27A1-209ENST00000600297 MYO5CQ9NQX4 1742 aa37.08■■■■□ 3.53
SLC27A1-209ENST00000600297 TROQ12816 1431 aaPredicted RBP37.07■■■■□ 3.52
SLC27A1-209ENST00000600297 AKNAQ7Z591 1439 aa37.06■■■■□ 3.52
SLC27A1-209ENST00000600297 KIF14Q15058 1648 aa37.04■■■■□ 3.52
SLC27A1-209ENST00000600297 DENND4BO75064 1496 aaPredicted RBP37.04■■■■□ 3.52
SLC27A1-209ENST00000600297 ARHGEF40Q8TER5 1519 aa36.95■■■■□ 3.51
SLC27A1-209ENST00000600297 PLCH2O75038 1416 aa36.95■■■■□ 3.51
SLC27A1-209ENST00000600297 VPS8Q8N3P4 1428 aa36.89■■■■□ 3.5
SLC27A1-209ENST00000600297 ZMYM4Q5VZL5 1548 aa36.89■■■■□ 3.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms