RNA–Protein interactions for RNA: ENST00000599938.5

ZNF558-206, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-206ENST00000599938 KIAA0586Q9BVV6 1533 aa47.81■■■■■ 5.24
ZNF558-206ENST00000599938 PRG4Q92954 1404 aaPredicted RBP47.81■■■■■ 5.24
ZNF558-206ENST00000599938 JPH4Q96JJ6 628 aa47.8■■■■■ 5.24
ZNF558-206ENST00000599938 RAPGEF2Q9Y4G8 1499 aa47.69■■■■■ 5.22
ZNF558-206ENST00000599938 IQGAP2Q13576 1575 aa47.55■■■■■ 5.2
ZNF558-206ENST00000599938 PRXQ9BXM0 1461 aa47.43■■■■■ 5.18
ZNF558-206ENST00000599938 TRHP20396 242 aaPredicted RBP47.39■■■■■ 5.18
ZNF558-206ENST00000599938 CTTNBP2Q8WZ74 1663 aa47.32■■■■■ 5.17
ZNF558-206ENST00000599938 CARMIL2Q6F5E8 1435 aa47.32■■■■■ 5.17
ZNF558-206ENST00000599938 EEA1Q15075 1411 aa47.3■■■■■ 5.16
ZNF558-206ENST00000599938 UGGT2Q9NYU1 1516 aa47.25■■■■■ 5.16
ZNF558-206ENST00000599938 CSRNP3Q8WYN3 585 aa47.24■■■■■ 5.15
ZNF558-206ENST00000599938 CHIC1Q5VXU3 224 aa47.22■■■■■ 5.15
ZNF558-206ENST00000599938 DISP1Q96F81 1524 aa47.2■■■■■ 5.15
ZNF558-206ENST00000599938 TNIKQ9UKE5 1360 aa47.18■■■■■ 5.14
ZNF558-206ENST00000599938 ADCY10Q96PN6 1610 aa47.17■■■■■ 5.14
ZNF558-206ENST00000599938 PTPRGP23470 1445 aa47.17■■■■■ 5.14
ZNF558-206ENST00000599938 KIAA0556O60303 1618 aa47.11■■■■■ 5.13
ZNF558-206ENST00000599938 TTBK1Q5TCY1 1321 aaPredicted RBP47.1■■■■■ 5.13
ZNF558-206ENST00000599938 FAM9AQ8IZU1 332 aaPredicted RBP47.06■■■■■ 5.12
ZNF558-206ENST00000599938 NPM1P06748 294 aaKnown RBP eCLIP46.99■■■■■ 5.11
ZNF558-206ENST00000599938 GOLGA3Q08378 1498 aa46.96■■■■■ 5.11
ZNF558-206ENST00000599938 MAPKBP1O60336 1514 aa46.93■■■■■ 5.1
ZNF558-206ENST00000599938 KIF21BO75037 1637 aa46.89■■■■■ 5.1
ZNF558-206ENST00000599938 UACAQ9BZF9 1416 aa46.86■■■■■ 5.09
ZNF558-206ENST00000599938 ABCC2Q92887 1545 aa46.84■■■■■ 5.09
ZNF558-206ENST00000599938 UHRF1BP1LA0JNW5 1464 aa46.83■■■■■ 5.09
ZNF558-206ENST00000599938 KIF13AQ9H1H9 1805 aa46.81■■■■■ 5.08
ZNF558-206ENST00000599938 ABCC10Q5T3U5 1492 aa46.73■■■■■ 5.07
ZNF558-206ENST00000599938 DIP2BQ9P265 1576 aa46.69■■■■■ 5.07
ZNF558-206ENST00000599938 SAMD9Q5K651 1589 aa46.67■■■■■ 5.06
ZNF558-206ENST00000599938 PLB1Q6P1J6 1458 aa46.64■■■■■ 5.06
ZNF558-206ENST00000599938 KDM5BQ9UGL1 1544 aa46.62■■■■■ 5.05
ZNF558-206ENST00000599938 FAM69CQ0P6D2 419 aa46.61■■■■■ 5.05
ZNF558-206ENST00000599938 ABCA8O94911 1581 aa46.59■■■■■ 5.05
ZNF558-206ENST00000599938 ZCCHC11Q5TAX3 1644 aaKnown RBP46.57■■■■■ 5.05
ZNF558-206ENST00000599938 P3H3Q8IVL6 736 aa46.57■■■■■ 5.05
ZNF558-206ENST00000599938 ASXL2Q76L83 1435 aa46.56■■■■■ 5.04
ZNF558-206ENST00000599938 RANGAP1P46060 587 aaPredicted RBP46.5■■■■■ 5.03
ZNF558-206ENST00000599938 EHMT2Q96KQ7 1210 aa46.5■■■■■ 5.03
ZNF558-206ENST00000599938 UBTFP17480 764 aaKnown RBP46.42■■■■■ 5.02
ZNF558-206ENST00000599938 EFCAB5A4FU69 1503 aa46.41■■■■■ 5.02
ZNF558-206ENST00000599938 FHOD3Q2V2M9 1422 aa46.37■■■■■ 5.01
ZNF558-206ENST00000599938 GLI2P10070 1586 aa46.33■■■■■ 5.01
ZNF558-206ENST00000599938 TSPOAP1O95153 1857 aa46.31■■■■■ 5
ZNF558-206ENST00000599938 RAPGEF6Q8TEU7 1601 aa46.3■■■■■ 5
ZNF558-206ENST00000599938 WDR7Q9Y4E6 1490 aa46.3■■■■■ 5
ZNF558-206ENST00000599938 EPRSP07814 1512 aaKnown RBP46.29■■■■■ 5
ZNF558-206ENST00000599938 ARID3CA6NKF2 412 aa46.18■■■■■ 4.98
ZNF558-206ENST00000599938 ATP10BO94823 1461 aa46.16■■■■■ 4.98
ZNF558-206ENST00000599938 MAP3K4Q9Y6R4 1608 aa46.13■■■■■ 4.97
ZNF558-206ENST00000599938 NUP153P49790 1475 aaKnown RBP46.11■■■■■ 4.97
ZNF558-206ENST00000599938 PPRC1Q5VV67 1664 aaKnown RBP46.11■■■■■ 4.97
ZNF558-206ENST00000599938 ARHGAP35Q9NRY4 1499 aa46.09■■■■■ 4.97
ZNF558-206ENST00000599938 KDM6BO15054 1643 aa46.04■■■■■ 4.96
ZNF558-206ENST00000599938 KCNH8Q96L42 1107 aa45.99■■■■■ 4.95
ZNF558-206ENST00000599938 CFAP43Q8NDM7 1665 aa45.95■■■■■ 4.95
ZNF558-206ENST00000599938 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP45.95■■■■■ 4.95
ZNF558-206ENST00000599938 HNRNPUL2Q1KMD3 747 aaKnown RBP45.95■■■■■ 4.95
ZNF558-206ENST00000599938 FMN1Q68DA7 1419 aa45.94■■■■■ 4.95
ZNF558-206ENST00000599938 TEX14Q8IWB6 1497 aa45.94■■■■■ 4.95
ZNF558-206ENST00000599938 CD109Q6YHK3 1445 aa45.86■■■■■ 4.93
ZNF558-206ENST00000599938 HECW1Q76N89 1606 aa45.83■■■■■ 4.93
ZNF558-206ENST00000599938 MAGI3Q5TCQ9 1506 aa45.81■■■■■ 4.92
ZNF558-206ENST00000599938 ABCA9Q8IUA7 1624 aa45.78■■■■■ 4.92
ZNF558-206ENST00000599938 CDK13Q14004 1512 aaKnown RBP45.77■■■■■ 4.92
ZNF558-206ENST00000599938 ATP1B4Q9UN42 357 aaPredicted RBP45.71■■■■■ 4.91
ZNF558-206ENST00000599938 CLIP1P30622 1438 aa45.7■■■■■ 4.91
ZNF558-206ENST00000599938 PLEKHD1A6NEE1 506 aa45.69■■■■■ 4.9
ZNF558-206ENST00000599938 COL17A1Q9UMD9 1497 aaPredicted RBP45.66■■■■■ 4.9
ZNF558-206ENST00000599938 PCF11O94913 1555 aaKnown RBP45.62■■■■■ 4.89
ZNF558-206ENST00000599938 CASKIN1Q8WXD9 1431 aa45.54■■■■■ 4.88
ZNF558-206ENST00000599938 LRRIQ1Q96JM4 1722 aa45.54■■■■■ 4.88
ZNF558-206ENST00000599938 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP45.5■■■■■ 4.87
ZNF558-206ENST00000599938 TTC37Q6PGP7 1564 aa45.48■■■■■ 4.87
ZNF558-206ENST00000599938 FYCO1Q9BQS8 1478 aa45.46■■■■■ 4.87
ZNF558-206ENST00000599938 CDK11AQ9UQ88 783 aaPredicted RBP45.45■■■■■ 4.87
ZNF558-206ENST00000599938 CEP162Q5TB80 1403 aa45.43■■■■■ 4.86
ZNF558-206ENST00000599938 CCDC18Q5T9S5 1454 aa45.43■■■■■ 4.86
ZNF558-206ENST00000599938 NEO1Q92859 1461 aa45.42■■■■■ 4.86
ZNF558-206ENST00000599938 ARAP3Q8WWN8 1544 aa45.41■■■■■ 4.86
ZNF558-206ENST00000599938 PHLDB1Q86UU1 1377 aa45.39■■■■■ 4.86
ZNF558-206ENST00000599938 TROQ12816 1431 aaPredicted RBP45.36■■■■■ 4.85
ZNF558-206ENST00000599938 KIF14Q15058 1648 aa45.35■■■■■ 4.85
ZNF558-206ENST00000599938 CFAP74Q9C0B2 1584 aa45.33■■■■■ 4.85
ZNF558-206ENST00000599938 FANCAO15360 1455 aa45.29■■■■■ 4.84
ZNF558-206ENST00000599938 LOC105371045A0A1W2PR82 267 aa45.28■■■■■ 4.84
ZNF558-206ENST00000599938 AEBP2Q6ZN18 517 aaPredicted RBP45.25■■■■■ 4.83
ZNF558-206ENST00000599938 MYO5CQ9NQX4 1742 aa45.23■■■■■ 4.83
ZNF558-206ENST00000599938 PLCH2O75038 1416 aa45.19■■■■■ 4.83
ZNF558-206ENST00000599938 AKNAQ7Z591 1439 aa45.18■■■■■ 4.82
ZNF558-206ENST00000599938 FRMPD1Q5SYB0 1578 aa45.16■■■■■ 4.82
ZNF558-206ENST00000599938 RAPGEF3O95398 923 aa45.13■■■■■ 4.82
ZNF558-206ENST00000599938 DENND4BO75064 1496 aaPredicted RBP45.1■■■■■ 4.81
ZNF558-206ENST00000599938 RICTORQ6R327 1708 aa45.06■■■■■ 4.8
ZNF558-206ENST00000599938 ADGRL1O94910 1474 aa45.04■■■■■ 4.8
ZNF558-206ENST00000599938 KDM4FA0A1W2PPD8 638 aa45.04■■■■■ 4.8
ZNF558-206ENST00000599938 ARHGAP5Q13017 1502 aa45.04■■■■■ 4.8
ZNF558-206ENST00000599938 EFCAB2Q5VUJ9 269 aa44.99■■■■■ 4.79
ZNF558-206ENST00000599938 PREX2Q70Z35 1606 aa44.98■■■■■ 4.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms